GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:10:19

Sequence gi568815583f:92611808_92812107 : 200300 bp : 44.78% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2930   3007   78  1  0   42   68    89 0.787   3.37
 1.02 Intr +   4492   4656  165  0  0  118   41    36 0.586   2.06
 1.03 Intr +   4756   4803   48  0  0   74  100    40 0.631   2.68
 1.04 Intr +   5994   6248  255  2  0   62  105    48 0.296   1.54
 1.05 Intr +   6629   6664   36  1  0  108   94    -7 0.443   0.36
 1.06 Intr +  10246  10458  213  0  0    0   97   172 0.361   8.21
 1.07 Term +  11698  11859  162  0  0   73   45    79 0.530   0.04
 1.08 PlyA +  13133  13138    6                               1.05

 2.04 PlyA -  13953  13948    6                               1.05
 2.03 Term -  14767  14692   76  0  1  101   37    12 0.064  -5.29
 2.02 Intr -  18538  18407  132  0  0  149   92   208 0.889  27.06
 2.01 Init -  26863  26688  176  1  2   74   68   115 0.964   6.92
 2.00 Prom -  33824  33785   40                              -2.46

 3.03 PlyA -  34823  34818    6                               1.05
 3.02 Term -  41791  41656  136  0  1   41   43   117 0.463  -0.01
 3.01 Init -  43852  43509  344  1  2   64   80   681 0.991  59.61
 3.00 Prom -  53467  53428   40                              -2.36

 4.06 PlyA -  54410  54405    6                               1.05
 4.05 Term -  55210  55115   96  1  0   72   39    67 0.756  -1.83
 4.04 Intr -  55498  55356  143  2  2   70   81    92 0.713   6.77
 4.03 Intr -  55775  55664  112  2  1   89   80    56 0.719   4.85
 4.02 Intr -  66402  66323   80  1  2   59   95    51 0.183   2.17
 4.01 Init -  68736  68679   58  0  1   72   98    23 0.176   3.18
 4.00 Prom -  73912  73873   40                              -2.96

 5.00 Prom +  88577  88616   40                              -4.46
 5.01 Sngl +  88631  89194  564  1  0   82   46   165 0.958   7.85
 5.02 PlyA +  89696  89701    6                               1.05

 6.00 Prom +  91756  91795   40                              -3.26
 6.01 Init +  98532  98552   21  2  0   76   89    58 0.474   2.77
 6.02 Term +  99887 100303  417  1  0   -5   38   389 0.645  19.88
 6.03 PlyA + 101079 101084    6                               1.05

 7.00 Prom + 101546 101585   40                              -5.26
 7.01 Sngl + 102755 103138  384  1  0   63   49   202 0.350   7.99
 7.02 PlyA + 103932 103937    6                               1.05

 8.03 PlyA - 110713 110708    6                               1.05
 8.02 Term - 113226 113210   17  1  2  100   45    22 0.203  -2.50
 8.01 Init - 122388 122178  211  0  1   98   95    74 0.622   8.05
 8.00 Prom - 123774 123735   40                              -2.76

 9.00 Prom + 123781 123820   40                              -7.26
 9.01 Init + 124963 125060   98  0  2   69   68   108 0.723   6.68
 9.02 Term + 143681 144098  418  2  1   26   44   277 0.583  11.85
 9.03 PlyA + 144723 144728    6                               1.05

10.00 Prom + 144850 144889   40                              -5.96
10.01 Sngl + 145721 146182  462  1  0   66   42   162 0.639   5.56
10.02 PlyA + 146186 146191    6                               1.05

11.00 Prom + 148483 148522   40                              -2.46
11.01 Init + 151705 152111  407  0  2  109   78   151 0.684  12.31
11.02 Intr + 177075 177157   83  0  2   72  101    49 0.514   3.88
11.03 Term + 178178 178242   65  0  2   75   42    60 0.525  -1.85
11.04 PlyA + 179909 179914    6                               1.05

12.00 Prom + 182316 182355   40                              -1.96
12.01 Init + 184189 184750  562  0  1   45   25   448 0.454  29.38
12.02 Term + 197787 197929  143  1  2   11   53   132 0.128   0.09
12.03 PlyA + 198253 198258    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_1|318_aa
MVEVVVLVATIPGGAGGAGGARHLQQTLIFWVISPDFLKMTPTAKNFTKGGKHGTQTYGC
IQGPLRIMCHVRIKHPPSPQGVFHGTAGETDFVEEVKMGENREGKSTKKVKCREQRLHAG
PPWLAIPCVLGRLRHPHPGLPTGSALSCRGETAFLAGGGCRAPMPLPTYPNSSQKTEEPK
MEGPPGSCGVSWVQACGLWGKQPAESTEMQTLYRCHAEIHLRKCLGIPRDCSESYGDPLP
GSLPSPHPQVAVYIRVLKKRPHIHKDDTGLQPSHTRRVTCPNLLLAHVLQEACPAGKIAL
NTGTPVAAPVSSVWHPGS

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_1|957_bp
atggtggaggtggtggtgctagtggcgaccattcctggtggtgctggtggtgccggtggt
gccaggcacctgcagcagaccctgatcttctgggtaatttcccctgatttccttaaaatg
acaccgacagccaagaatttcaccaaagggggcaagcacgggacacaaacttatgggtgc
atccagggccctttgaggataatgtgccatgtccgtataaagcatcccccatccccacag
ggtgtgttccacggcacagcaggggagacagattttgtagaagaggtcaagatgggggaa
aacagagaaggaaagtcaacaaagaaggtgaaatgcagggagcagagactacacgcaggc
cccccgtggctggcaataccatgcgtgctgggccggctgcgccaccctcacccagggctt
cccacgggctctgctctttcctgcagaggcgaaactgccttcctggcaggcggaggctgc
cgagctcccatgccccttcccacatatcccaactcttctcagaaaactgaagaaccgaag
atggagggacctcctgggtcctgtggggtctcctgggtccaggcctgcgggctctgggga
aagcagccggcagaatcaacggagatgcaaactctgtaccgctgccatgctgaaattcac
ctccgtaagtgtctgggcatcccacgggactgctctgaatcttacggggatcccctacca
ggctctctgccctcacctcacccccaggttgctgtctacatccgtgtgcttaagaaacgc
ccacacatacacaaggatgacactgggttacaaccatcccacacgaggagagtgacatgt
cccaacttgcttctggcccatgttttacaagaagcttgtccggcaggcaaaatagccctc
aacacaggaacacctgttgcagcacctgtcagtagcgtctggcaccctggcagctga

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_2|127_aa
MDEEIRVHDERLAQKHTNRGIAGLTPEPQSLHFELVALTVTLKTELSLKGLVLFYSLRGS
GKRLKKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVFDIKYRAASFSLLSFWGQCQKQI
SLQAAIS

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_2|384_bp
atggatgaagaaattcgggttcatgacgagaggcttgctcagaagcacaccaacagggga
attgcagggctgacccctgaacctcagtcgctgcactttgagttggtggctctgactgtc
acactcaaaactgaactgagtctaaagggtttagtcctgttttattctcttcgtgggtcg
ggaaagaggttaaagaagacacgcaagtatgatatcatcaccactccagcagagcgagtg
gaaatggcgccactaaatgaagaggatgatgaagatgaggactccacagtattcgacatc
aaatacagggctgccagcttctctctgctgtcattctggggacagtgtcaaaaacagatt
tctctgcaagccgccatctcatga

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_3|159_aa
MRAVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSG
AAGGSGSSSSNSSGDALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFSRGPLR
LGSPVHLRVSMPDAGLPFSRGAIVIYGLPDCSVGVKVNA

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_3|480_bp
atgcgcgccgtgccgctgcccgccccgctcctgccgctgctgctgctcgcgctcctggcc
gctcccgccgcccgcgccagcagagccgagtccgtctccgcgccgtggcccgaacccgag
cgcgagtcgcggccaccgcccggcccggggcccgggaacaccacccggtttgggtctggg
gcggcgggcggcagcggcagctccagctccaacagcagtggcgacgccttggtgacccgc
atttccatcctcctccgcgacctacccaccctcaaggcagccgtgatcgtggcgttcgcc
tttaccaccctcctcatcgcctgcctgctgctgcgcgtcttcagcagagggcccttgagg
ttgggaagtccagttcatcttcgtgtctccatgcccgatgcgggcctgccattcagcaga
ggtgccattgtcatctacggacttcctgattgttcagttggagtgaaggttaatgcctag

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_4|162_aa
MDGCYMSVLAAYFPGLIPKESLCKKISKMVRTRCGSLTLDFLVPMMRPELCLGIKTQIPA
NVRSNSTVTERLTMPAVGIAVGTAFLGKDVCGLLSSALLVFASRSKATLMCMGKVLHCER
NCGQMVHLSSKALLGDTSETFIEIFLFGNSSLFPWFDDTSQL

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_4|489_bp
atggatggctgttacatgtcagtactggcagcttactttccaggtcttatccctaaagag
tctctatgtaaaaagatcagcaagatggtccgcaccagatgtggctccttgaccttggac
ttcttagttcccatgatgaggcccgagctctgcctgggaattaaaacacaaattcctgca
aacgtgaggtctaactccactgtcacggagaggctgacgatgccagctgtgggaattgca
gtggggacagcttttctggggaaagatgtctgtggcctgcttagctctgccctgctggtc
ttcgcctctcgatccaaagcaactttgatgtgtatgggaaaagtactgcactgtgaaagg
aactgtggacagatggtccacctgagctcaaaggctctcctaggggacacttcagaaact
ttcatagaaatatttctctttggcaacagctcgctgtttccatggtttgacgatactagc
cagctgtaa

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_5|187_aa
MGKDFMSKTPKAMATKDKIDQWDLIKLKSFCTAKETTIRVNTQPTEWEKIFAIHPSDKGL
ISRIYKELKQIYKKKSNNPVKKWAKDMNRHSSKEDIYAANRHTKKYSSSLDIREMQIKTT
MRYHLTPVGMAIIKKSGNNRDWRGCGERGTLLYCWWDCKLVQPLWKTVWQFLKDLELEIP
FDPAIPL

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_5|564_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagacaaaattgac
caatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacacgcaacctacagaatgggagaaaatttttgcaatccacccatctgacaaagggcta
atatccaggatctacaaagaacttaaacaaatttacaagaaaaaatcaaacaaccccgtc
aaaaagtgggcaaaggatatgaacagacactcctcaaaagaagacatttatgcagccaat
agacacacgaaaaaatactcatcatcactggacatcagagaaatgcaaatcaaaaccacc
atgagataccatctcacaccagttggaatggcaatcattaaaaagtcaggaaacaacagg
gactggagaggatgtggagaaagaggaacacttttatactgttggtgggactgtaaacta
gtccaaccattgtggaagacagtgtggcaattcctcaaggatctagaactagaaatacca
tttgacccagccatcccattatag

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_6|145_aa
MKPRTFALSSSGGGRSGSGKAAQFREGSRRAAARRHPARAFPAARMPKRKVSSAEGAAKE
ESKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKAQTKGKRGAKGKQAEVANQETKEDLP
AENGETKTEESPASDEAGEKEAKSD

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_6|438_bp
atgaagccgcggaccttcgcgctcagcagctcgggcggcgggaggagcggcagcggcaag
gcagcccagtttcgcgaaggctctcggcgcgccgcggcccgcaggcacccggcacgcgcc
ttccccgccgccaggatgcccaagaggaaggtcagctccgccgaaggcgccgccaaggaa
gagtccaagaggagatcggcgcggttgtcagctaaacctcctgcaaaagtggaagcgaag
ccgaaaaaggcagcagcgaaggataaatcttcagacaaaaaagcgcaaacaaaagggaaa
aggggagcaaagggaaaacaggccgaagtggctaaccaagaaactaaagaagatttacct
gcagaaaacggggaaacgaaaactgaggagagtccagcctctgatgaagcaggagagaaa
gaagccaagtctgattaa

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_7|127_aa
MAGVRARAPLPLALLLSLPAAPGGRDPSASRARFPQRLGRAPCFEVGLRKPPPPPLLSPP
SFSSGSSRPLQRPRGPKDGAGRKVCAKLVKRLPGESGSCEDGQSAPAQPPRRRTGTRACP
PRAPLWR

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_7|384_bp
atggccggagtccgggcgcgagcgccgcttcccctcgccctcctcctctcccttcccgcg
gcccctggaggccgagacccatccgcgtcccgcgcgcgctttcctcagaggctcggccgg
gcgccctgcttcgaagtgggcctgaggaagcctccgcctccgccgctgctttctccccct
tccttctccagcggctcctccaggccgctccagagaccccgaggacccaaggacggtgcc
gggcggaaagtctgtgcgaagctggtgaaaaggttgcccggagagagcggaagctgtgag
gatgggcaaagcgcccctgcccagccgccccgccgcagaaccggtacacgcgcctgcccg
ccccgggcgcccctttggcgctga

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_8|75_aa
MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVHRAAIPG
YLTAEVLELAGVGYG

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_8|228_bp
atggccggaggcaaagctggaaaggacagtgggaaggccaaggctaaggcagtatctcgc
tcacagagagctgggctacagtttcctgtgggccgcatccacagacacttgaagactcgc
accacaagccatggaagggtgggtgccactgctgccgtgcacagggctgcgattccgggg
tacctcactgcagaggtgctggagctggcaggagtgggctatgggtag

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_9|171_aa
MENATIFSIPIDGLKDQQELDSKIKEANHGDTRQTGSGVDLQQNPTDLQLRVLTVRRKTN
KQKGHPHQNPICTSPSSKTKVDKTTKTGRNQSRKAENSKNQSTSSPPKEHSSLPAMEQSW
TENDFDELREEGFRRSVKTNFSELKEDVQTHRKEAKNLEKRLDEWLTESTV

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_9|516_bp
atggaaaatgccaccatctttagtattcctatagatggcctcaaagatcagcaagagctg
gacagcaaaattaaagaggccaatcatggagataccaggcaaacagggtctggagtggac
ctccagcaaaatccaacagacctgcagctgagggtcctgactgttagaaggaaaactaac
aaacagaaaggacatccacaccaaaaccccatctgtacatcaccatcatcaaagaccaaa
gtagataaaaccacaaagacggggagaaaccagagcagaaaagctgaaaattctaaaaat
cagagcacctcttctcctccaaaggaacacagctccttgccagcaatggaacaaagctgg
acggagaatgactttgatgagttgagagaagaaggcttcagacgatcagtaaaaacaaac
ttctccgagctaaaggaggatgttcaaacccatcgcaaagaagctaaaaaccttgaaaaa
agattagacgaatggctaactgaatcaacagtgtag

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_10|153_aa
MKAEIKMFFETNKNKNTTYQNLWDTFKVVCRGKFIALNAHKRKQERSKIDTLPSQLKELE
KQEKTHSKASRRQEIAKIRAELKEIETQKALQKINESRSWFFEKINKIDRPLARLIKKKR
EKNQIDEIKNDKGENTTDPPEIQTTIREYYKHL

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_10|462_bp
atgaaggcagaaataaagatgttctttgaaaccaataagaataaaaacacaacataccag
aatctctgggacacatttaaagtagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatcgaaaattgacaccctaccatcacagttaaaagaactagag
aagcaagagaaaacacattcaaaagctagcagaaggcaagaaatagctaagatcagagca
gaactgaaggaaatagagacacaaaaagcccttcaaaaaatcaatgaatccaggagctgg
ttttttgaaaagatcaacaaaattgatagaccactagcaagactaataaagaagaagaga
gagaagaatcaaatagatgaaataaaaaatgataaaggggagaacaccaccgatccccca
gaaatacaaactaccatcagagaatactataaacacctctag

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_11|184_aa
MEATTVLEKNLIQALLELQARGSAYTDPHLCDFLKSVFIDEEVKLIKKMGNHPTNLFRLS
GPQADWTSVSLKGSTLSTSRSLLNPATPEGPLSKHQGFCLRLSLQPLGSFLTTLEPSPCL
GPNRNKAFCNSKKTGSAGIVSGVGSFWWVRGLADFKNGAADLRDSLEETETQKLALEQLL
REIV

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_11|555_bp
atggaggccaccacagtcctggagaagaacctgatccaggcccttttggagcttcaggcc
cggggttctgcctacacagacccccatctctgtgacttcctaaagagcgtcttcatagat
gaggaagtgaaactcattaaaaagatgggcaatcacccgaccaacctcttcaggctgtct
ggcccccaggccgactggaccagtgtctctttgaaaggctcaaccttaagcacatctagg
agcctactgaacccagcaactccagaagggcccctctcaaagcatcagggcttctgcctg
agactctccctccagccactgggcagctttttaaccaccctagagccctctccatgcctt
ggaccaaatagaaataaagctttttgcaacagcaaaaaaacagggagtgctgggattgtg
tctggagttggttccttctggtgggttcgtggtctcgctgacttcaagaacggggccgcg
gacctccgcgacagtttagaagaaacggaaactcagaagcttgcacttgagcagctgcta
agagaaattgtataa

>gi568815583f:92611808_92812107|GENSCAN_predicted_peptide_12|234_aa
MLLQHGASVQPESDLASPVHEAARRGHVECVDSLTAYRGKNDHNISHVGTSLYLACENQQ
IACVKKLLESGADLNPGRGSPLHAVAFMKALMKDSPLHAVARTASEELACLLMDFGADTQ
AKNAEGKCHVELVPPESPLIQLFLEREGPPSFDAVMPRNQKGFGIQQHHKITKVVLPEDL
KWFLLHLCPAGNPAAQFRKAASVLTSRGPFLLSLRLLLRANKEDRKLFIVAFSS

>gi568815583f:92611808_92812107|GENSCAN_predicted_CDS_12|705_bp
atgcttctgcagcatggagccagcgttcaacctgagagtgatctggcatcccccgtccat
gaagctgctaggagaggccacgtggagtgtgtcgactctcttacagcttataggggcaaa
aatgaccataacatcagccacgtgggcacttcactgtatttggcttgtgaaaaccagcag
atagcctgtgtcaagaagcttctggagtcaggagcagacctgaacccagggagaggttcc
ccacttcatgcagtggccttcatgaaggccctcatgaaggattccccacttcatgcagtg
gccaggacagccagtgaagagctggcctgcctgctcatggattttggagcagacacccag
gccaagaatgctgaaggcaaatgtcatgtggagctggtgcctccagagagccctttgatc
cagctcttcttggagagagaagggcccccttcttttgatgcagttatgcctagaaatcag
aagggctttggaatccagcagcatcataagataaccaaagtcgtcctcccagaggatctg
aaatggtttctcctacatctttgccctgcggggaatcccgcggcgcagttccgcaaagct
gccagcgtgcttaccagtcggggcccgtttcttttgtctctgcgtttgctgctccgtgca
aacaaggaggacagaaaactctttatcgtggcgttttcttcctga