GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:53:51

Sequence gi568815583f:78240429_78447974 : 207546 bp : 47.04% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    794    934  141  0  0   80   59   129 0.374   9.52
 1.02 Intr +   5720   5899  180  0  0   54   68    87 0.126   3.14
 1.03 Intr +   5985   6169  185  1  2   41   52    80 0.147  -0.79
 1.04 Intr +  19235  19324   90  1  0   64  103    16 0.299   0.89
 1.05 Intr +  23778  23965  188  2  2   55   99   187 0.564  14.99
 1.06 Intr +  24329  24467  139  2  1  121   86   364 0.994  39.97
 1.07 Intr +  30069  30249  181  2  1   84   84    75 0.675   6.14
 1.08 Intr +  32667  32771  105  1  0   59   93    49 0.856   2.69
 1.09 Intr +  33769  33996  228  2  0  103  100   402 0.961  40.74
 1.10 Intr +  35070  35300  231  1  0   20   95   170 0.954   8.64
 1.11 Intr +  39617  39717  101  0  2  116   83    79 0.999  10.03
 1.12 Term +  39817  40032  216  0  0  108   45   168 0.942  11.64
 1.13 PlyA +  40541  40546    6                               1.05

 2.09 PlyA -  41174  41169    6                               1.05
 2.08 Term -  47037  47028   10  2  1  112   44     5 0.273  -3.83
 2.07 Intr -  47954  47861   94  0  1   39   75   128 0.556   5.62
 2.06 Intr -  49284  49191   94  0  1   61   71    72 0.908   2.34
 2.05 Intr -  49671  49523  149  1  2   90   64    71 0.831   4.85
 2.04 Intr -  52360  52188  173  0  2   26   99   143 0.869   8.79
 2.03 Intr -  52844  52739  106  0  1   46  101    65 0.829   2.87
 2.02 Intr -  54545  54518   28  2  1   90  115    17 0.647   2.29
 2.01 Init -  59217  59134   84  0  0   96   89    73 0.531   7.38
 2.00 Prom -  61332  61293   40                              -6.66

 3.00 Prom +  61910  61949   40                              -4.66
 3.01 Init +  70539  70603   65  2  2  114  107    23 0.617   7.43
 3.02 Intr +  76851  77013  163  0  1   94   62    38 0.158   1.78
 3.03 Term +  78819  78836   18  2  0  132   29    33 0.324   0.12
 3.04 PlyA +  81062  81067    6                               1.05

 4.00 Prom +  83170  83209   40                              -3.06
 4.01 Init + 100001 100070   70  1  1  114   94   199 0.829  24.31
 4.02 Intr + 100615 100793  179  2  2   76   72   372 0.641  34.04
 4.03 Intr + 103071 103184  114  2  0   98   58   142 0.866  12.84
 4.04 Term + 107499 107549   51  2  0  113   49   101 0.728   6.13
 4.05 PlyA + 111675 111680    6                               1.05

 5.06 PlyA - 113224 113219    6                               1.05
 5.05 Term - 121290 121119  172  2  1   97   43    47 0.061  -1.60
 5.04 Intr - 134216 134078  139  0  1   87   53    72 0.359   3.12
 5.03 Intr - 135965 135763  203  1  2    8   47   125 0.505  -0.67
 5.02 Intr - 137270 136193 1078  0  1  -43   53   418 0.119  14.43
 5.01 Init - 138294 137718  577  0  1   62   40   239 0.208  11.81
 5.00 Prom - 138918 138879   40                              -2.16

 6.07 PlyA - 139404 139399    6                               1.05
 6.06 Term - 144457 144359   99  1  0   61   37    77 0.082  -1.97
 6.05 Intr - 148733 148626  108  2  0    5   60   136 0.210   2.98
 6.04 Intr - 156979 156826  154  0  1  115   64     8 0.062   1.17
 6.03 Intr - 164870 164795   76  0  1  102   65    56 0.110   3.27
 6.02 Intr - 170344 170251   94  1  1   69   50   135 0.920   7.34
 6.01 Init - 172271 172269    3  2  0  108   81     0 0.794   1.30
 6.00 Prom - 194029 193990   40                              -0.86


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 180440 180559  120  1  0  103   85    43 0.917   6.19
S.002 Term + 182519 182650  132  1  0   80   43   113 0.962   4.09
S.003 Term + 190822 190912   91  1  1   96   45    96 0.821   3.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:78240429_78447974|GENSCAN_predicted_peptide_1|661_aa
XGLRQPPQCALDIESGARLGDPCAPEGAEALGCICVPSGPVYIEWVGSLGCSMGLGAVEQ
GVALVEEPRAAQKLTEGVGGSGMAGCRSRALPHGKAAKAQREIERSAGPAGCSECRARQA
HAHPELQLACKRLAVAPVPAGASPSTPPDKLREPAPALASPERGSHSAAHRARHIAAVHK
SCCDEINKFHRENTCFLHMPAGSTDPRKGKGAASGRRDSCRRAPSRPKPPSPAPAMARGG
SQSWSSGESDGQPKEQTPEKPRHKMVKETQYYDILGVKPSASPEEIKKAYRKLALKYHPD
KNPDEGEKFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFSSPMDIFDMFFGGG
GRMARERRGKNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKG
RGMQIHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCESCSGAKVIREKKIIEVHVEKG
MKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKK
TIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLS
LEKLPQLEALLPPRQKVRITDDMDQVELKEFCPNEQNWRQHREAYEEDEDGPQAGVQCQT
A

>gi568815583f:78240429_78447974|GENSCAN_predicted_CDS_1|1986_bp
naaggcctccggcagccaccacagtgtgctctggacatcgagtctggggcccggctggga
gacccttgtgctccagagggcgctgaggctctgggctgcatttgtgtcccctctggccct
gtctacatcgagtgggtggggtcccttgggtgttcgatgggactgggcgctgtggagcag
ggggtggcgctcgtcgaagagcctcgggccgcacagaagctcacggagggggtgggaggc
tcaggcatggcgggctgcaggtcccgagccctgccccacgggaaggcagctaaggcccag
cgagaaatcgagcgcagcgccgggccggccggctgctctgagtgcagggcccgccaagcc
cacgcccacccggaactacagctggcctgcaagcgcctcgccgtagccccggttcccgct
ggcgcctctccttccacacctcccgacaagctgagggagccggctccggccttggccagc
ccagaaaggggctcccacagtgcagcgcacagagccagacacatagctgctgtgcacaaa
tcctgttgtgatgaaatcaataaatttcatcgtgagaacacgtgctttctgcacatgcca
gccggctccacggacccacggaagggcaagggggcggcctcggggcggcgggacagttgt
cggagggcgccctccaggcccaagccgccttctccggcccccgccatggcccggggcggc
agtcagagctggagctccggggaatcagacgggcagccaaaggagcagacgcccgagaag
cccagacacaagatggtgaaggagacccagtactatgacatcctgggcgtgaagcccagc
gcgtccccggaggagatcaagaaggcctatcggaagctggcgctcaagtaccacccggac
aagaacccggatgagggcgagaagtttaaactcatatcccaggcatatgaagtgctttca
gatccaaagaaaagggatgtttatgaccaaggcggagagcaggcaattaaagaaggaggc
tcaggcagccccagcttctcttcacccatggacatctttgacatgttctttggtggtggt
ggacggatggctagagagagaagaggcaagaatgttgtacaccagttatctgtaactctt
gaagatctatataatggagtcacgaagaaattggccctccagaaaaatgtaatttgtgag
aaatgtgaaggtgttggtgggaagaagggatcggtggagaagtgcccgctgtgcaagggg
cgggggatgcagatccacatccagcagatcgggccgggcatggtacagcagatccagacc
gtgtgcatcgagtgcaagggccagggtgagcgcatcaaccccaaggaccgctgcgagagc
tgcagcggggccaaggtgatccgtgagaagaagattatcgaggtacatgttgaaaaaggt
atgaaagatgggcaaaagatactatttcatggagaaggagatcaggagcctgagctggag
cctggtgatgtcataattgtgcttgatcagaaggatcatagtgtctttcagagacgaggc
catgacttgatcatgaaaatgaaaattcagctttctgaagctctttgtggcttcaagaag
acgataaaaacattggacaatcgaattcttgttattacatccaaagcaggtgaggtgata
aagcacggggacctgagatgcgtgcgcgatgaaggaatgcccatctacaaagcacccctg
gaaaaagggattctgatcatacagtttttagtaatctttcctgaaaaacactggctttct
ctggaaaagcttcctcagctggaagctttactccctcctcgacagaaagtgaggattaca
gatgacatggatcaggtggagctgaaggagttttgtcccaatgagcagaactggcgtcag
cacagggaggcctacgaggaggacgaagacgggccccaggctggagtgcagtgccagacg
gcatga

>gi568815583f:78240429_78447974|GENSCAN_predicted_peptide_2|245_aa
MPRPFDSSSLRVAVARSPASDVQPGSAVYGILFKQEQAHDDAIWSVAWGTNKKENSETVV
TGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG
KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY
SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI
YDVGL

>gi568815583f:78240429_78447974|GENSCAN_predicted_CDS_2|738_bp
atgccccgccccttcgatagctcatctttgcgcgtcgcagtcgcgcggagcccggcttcc
gacgtgcagcctggcagtgcagtgtacggtattctcttcaaacaagagcaagcccatgat
gatgccatttggtcagttgcttgggggacaaacaagaaggaaaactctgagacagtggtc
acaggctccctagatgacctggtgaaggtctggaaatggcgtgatgagaggctggaccta
cagtggagtctggagggacatcagctgggagtggtgtctgtggacatcagccacaccctg
cccattgctgcatccagctctcttgatgctcatattcgtctttgggacttggaaaatggc
aaacagataaagtccatagatgcaggacctgtggatgcctggactttggccttttctcct
gattcccagtatctggccacaggaactcatgtcgggaaagtgaacatttttggtgtggaa
agtgggaaaaaggaatattctttggacacgagaggaaaattcattcttagtattgcatat
agtcctgatgggaaatacctagccagtggagccatagatggaatcatcaatatttttgat
attgcaactggaaaacttctgcataccctggaaggccatgccatgcccattcgctccttg
accttttccccggactcccagctccttgtcactgcttcagatgatggctacatcaagatc
tatgatgtgggcctgtga

>gi568815583f:78240429_78447974|GENSCAN_predicted_peptide_3|81_aa
MPHGLFHATDRKLLTNMYNLLWAQSQLLSLASEALCDLPLLLLTPISRRQPSLNVSTLGS
PLLDTHSVLLRALPCQKVGNA

>gi568815583f:78240429_78447974|GENSCAN_predicted_CDS_3|246_bp
atgccccatgggctatttcacgccacggacaggaagttgctgaccaatatgtacaatctg
ctctgggcacagtcccaacttctcagcctggcatctgaggccctctgtgatctgcctctg
cttcttctcacacccatctccagaaggcagcccagtctaaatgtcagcaccctggggagc
cctcttctggacactcacagcgtgctgctccgagcactgccatgccagaaagttggcaat
gcctag

>gi568815583f:78240429_78447974|GENSCAN_predicted_peptide_4|137_aa
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR
TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDELI
LTFGADDVVCTRIYVRE

>gi568815583f:78240429_78447974|GENSCAN_predicted_CDS_4|414_bp
atgcccaacttcgccggcacctggaagatgcgcagcagcgagaatttcgacgagctgctc
aaggcactgggtgtgaacgccatgctgaggaaagtggccgtagcggctgcgtccaagccg
cacgtggagatccgccaggacggggatcagttctacatcaagacatccaccacggtgcgc
accactgagatcaacttcaaggtcggagaaggctttgaggaggagaccgtggacggacgc
aagtgcaggagtttagccacttgggagaatgagaacaagatccactgcacgcaaactctt
cttgaaggggacggccccaaaacctactggacccgtgagctggccaacgatgaacttatc
ctgacgtttggcgccgatgacgtggtctgcaccagaatttatgtccgagagtga

>gi568815583f:78240429_78447974|GENSCAN_predicted_peptide_5|722_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIEAIIKSLPTKKSPGPDGFTAEFYQRYNEEL
VPFLLKLFQSIEKEGILSNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLIHHNQVSFIPGMQGWFNIHKSMKVIQHINRTKDKNYMIISIDAEKAFDKI
QQPFMLKTLKKLGIQLTKDVKDLFKENYKALLNEIKEDTNKWKNIPCSWIGRINIMKMAI
LPKVIYRFNAIPIKPPMTFFTELEKTTLKFIWNQKRVCIAKTILSQKNKAGGITLPDFKL
YYKATVTKAAWYCYQNRDIDQWNRTEPSEIIPHIYNHLIFDKPDKNKQWGKDSLFNKWCW
ENWLAIWRKLKLDPFLTPYTKINSRWIKDLNVRPKIIKTLEENLGNTIQDIDMGKDFMTK
TPKAMATKAKIDKWDLVKLKSFFTAKETTIGVNRQPTEWEKIFTIYPSDKVLISRIHKEL
KQIYKKKPKNPIKKWAKDMNRHFSKEDIYAANRHMKKCSSPLAIREMQIKTTMRYHLTPV
RMAIIKKSGNNSKDLEPTQMSINDDWIKKMWHIYIMEYDAAIKKDEFLSFVGTWMKLETI
ILSKLSQGEKTKHRMFSLIGQGPVQPQHLVLAWHRVECSFPENPHKVPTPGLLSGSENES
IVGPGRQSLPQSTSDDPTVLGLPDPRSQQTQTKESTFCLNAPAAVPERALIGLAWITCLS
QN

>gi568815583f:78240429_78447974|GENSCAN_predicted_CDS_5|2169_bp
atggataaattcctggacacatacaccctcccaagactaaaccaggaagaagttgaatcc
ctaaatagaccaataacaggctctgaaattgaggcaataattaagagcctaccaaccaaa
aaaagtccaggaccagacggattcacagctgaattctaccagaggtataacgaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctctctaactca
ttttatgaagccagcatcatcctgataccaaagcctggaagagacacaacaaaaaaagag
aattttagaccaatatccctaatgaacatcgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccacaatcaagttagcttcatccct
gggatgcaaggctggttcaacatacacaaatcaatgaaagtaatccagcatataaacaga
accaaagacaaaaactacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacagcccttcatgctaaaaactctcaaaaaactaggaatccaacttacaaaggatgtg
aaggacctcttcaaggagaactacaaagcactgctcaacgaaataaaagaggacacaaac
aaatggaagaacattccatgctcatggataggaagaatcaatatcatgaaaatggccata
ctgcccaaggtaatttatagattcaatgccatccccatcaagccaccaatgactttcttc
acagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagtctgcattgcc
aagacaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaacta
tactacaaggctacagtaaccaaagcagcatggtactgctaccaaaacagagatatagat
caatggaacagaacagagccctcagaaataataccacacatctacaaccatctgatcttt
gacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgg
gaaaactggctagccatatggagaaagctgaaactggatcctttccttacaccttataca
aaaattaattcaagatggattaaagacttaaatgttagacctaaaatcataaaaacccta
gaagaaaacctaggcaataccattcaggacatagacatgggcaaggacttcatgactaaa
acaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctagttaaactaaag
agcttctttacagcaaaagaaactaccatcggagtgaacagacaacctacagaatgggag
aaaatttttacaatctacccatctgacaaagtgctaatatccagaatccacaaagaactt
aaacaaatttacaagaaaaaaccaaagaaccccatcaaaaagtgggcaaaggatatgaac
agacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcatca
ccactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagtt
agaatggcgatcattaaaaagtcaggaaacaacagcaaagacttggaaccaacccaaatg
tccatcaatgatgactggattaagaaaatgtggcacatatacatcatggaatacgatgca
gccataaaaaaggatgagttcttgtcctttgtagggacatggatgaagctggaaaccatt
attctgagcaaactatcgcaaggagagaaaaccaaacaccgcatgttctcactcataggg
cagggccctgtgcagcctcagcacctggtgctggcctggcaccgagttgagtgctcattc
cctgagaacccgcataaggtgcccacaccaggccttctcagtggctctgaaaatgagagc
atagtgggacctgggaggcagagtctcccgcaaagtaccagtgatgaccccacagttcta
ggcttacctgatccccgtagccagcaaacccagacgaaagagagcaccttctgcctaaat
gctccggctgcggtcccagagagggctctgattggcttagcttggatcacatgcctgtct
cagaactga

>gi568815583f:78240429_78447974|GENSCAN_predicted_peptide_6|177_aa
MLIEFGVVAAPEGQQSTAVYHWCNTAVLDPLALAGMMAVAAPDDPPPPSVSSSKPSTVGT
RQLSGPWHARLCPREADIMELIKPTWTQVPGIQEAVLSHPPQQSPADAGLPGSGQRSSKG
AVPPCRLHIPEVMAAVITDKDVPMLPQSRLLQDAWGLGDPWTAVRATLTDYGKEQSS

>gi568815583f:78240429_78447974|GENSCAN_predicted_CDS_6|534_bp
atgctgattgaatttggtgtggtcgccgcacctgagggccagcagtccacagctgtctac
cactggtgcaataccgcggtgctggacccactggcattggctggcatgatggcagtggct
gctcctgacgacccgccaccgccatcggtatcatcttccaagccatcaacagtgggcacc
aggcagctgtcagggccctggcatgcaaggctgtgcccaagggaagcggacatcatggag
ctaattaaaccaacgtggacccaagtgcctggaattcaggaggctgtcctctcccaccca
ccccaacagagccccgcagacgctggattaccaggaagtggacaaagaagcagcaaaggg
gcagttcctccatgtcgtctgcacatcccagaagtgatggccgcggtcattactgacaaa
gatgtacccatgttgccacagtctcggctgctgcaggatgcctggggtctgggcgatcca
tggacagcagtgagggctacattgacagattacggcaaagagcagagcagttag