GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:11:02

Sequence gi568815583f:75803964_76033099 : 229136 bp : 39.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    970    965    6                               1.05
 1.06 Term -   2420   2258  163  1  1   65   47   105 0.726   0.53
 1.05 Intr -   4567   4499   69  0  0   46   91    79 0.335   1.38
 1.04 Intr -   6578   6330  249  1  0   76   35   140 0.733   3.13
 1.03 Intr -  11360  11211  150  1  0   69   76   169 0.783  12.16
 1.02 Intr -  12174  11978  197  0  2  118   20   137 0.631   7.19
 1.01 Init -  23707  23549  159  1  0   79  116   111 0.864  12.87
 1.00 Prom -  29943  29904   40                              -5.25

 2.00 Prom +  38455  38494   40                              -6.25
 2.01 Init +  38806  39013  208  0  1   50   80    96 0.501   4.03
 2.02 Intr +  39051  39257  207  1  0   28   53   141 0.600   2.73
 2.03 Intr +  39693  39883  191  1  2   15   89   242 0.695  15.38
 2.04 Intr +  40352  40626  275  1  2   68   60   148 0.889   5.41
 2.05 Intr +  40689  40824  136  0  1   10   36   172 0.780   3.85
 2.06 Intr +  50423  50524  102  1  0   98   91   109 0.948  11.65
 2.07 Intr +  55915  56019  105  0  0   63  103    60 0.907   4.49
 2.08 Intr +  64988  65047   60  1  0   85   50   126 0.491   6.51
 2.09 Intr +  67079  67178  100  1  1   65   98    76 0.871   5.06
 2.10 Intr +  67274  67461  188  0  2   60   49    65 0.803  -1.71
 2.11 Intr +  69465  69605  141  2  0  102  101   146 0.997  16.93
 2.12 Intr +  79403  79461   59  1  2  119  110    45 0.917   6.56
 2.13 Intr +  99764  99915  152  2  2   59    6   138 0.019   1.59
 2.14 Intr + 100047 100140   94  1  1   53   81    93 0.131   3.20
 2.15 Intr + 100528 100703  176  1  2   74   77   205 0.189  16.66
 2.16 Intr + 101615 101643   29  0  2   86   72    27 0.024  -2.18
 2.17 Intr + 109240 109327   88  0  1  108   84    72 0.268   7.42
 2.18 Intr + 113267 113431  165  0  0   67   97    44 0.083   2.21
 2.19 Intr + 125921 126086  166  0  1  132   53    98 0.961   8.80
 2.20 Intr + 128722 129067  346  1  1   77   83   323 0.425  25.17
 2.21 Intr + 130497 130516   20  2  2   71  115     5 0.158  -4.01
 2.22 Term + 136512 136659  148  0  1   76   37   128 0.167   2.89
 2.23 PlyA + 136713 136718    6                               1.05

 3.05 PlyA - 137811 137806    6                               1.05
 3.04 Term - 141085 141066   20  2  2  110   49    14 0.248  -2.80
 3.03 Intr - 152048 151969   80  1  2   78   79    93 0.738   5.68
 3.02 Intr - 158011 157865  147  0  0   79  111    93 0.968   9.13
 3.01 Init - 168483 168239  245  0  2   85   11   165 0.457   5.75
 3.00 Prom - 168537 168498   40                              -4.95

 4.02 PlyA - 169157 169152    6                               1.05
 4.01 Sngl - 172500 172108  393  0  0   78   42   382 0.840  28.59
 4.00 Prom - 174870 174831   40                              -4.95

 5.07 PlyA - 175463 175458    6                               1.05
 5.06 Term - 183221 183141   81  2  0   65   39    68 0.637  -3.69
 5.05 Intr - 183748 183587  162  1  0   -7  100   172 0.888   8.15
 5.04 Intr - 186519 186427   93  0  0   36   85   105 0.278   4.24
 5.03 Intr - 193816 193732   85  0  1   75   39    36 0.047  -3.70
 5.02 Intr - 201846 201781   66  2  0  120   55    87 0.220   5.70
 5.01 Init - 210457 210213  245  1  2   64   87   150 0.878   9.75
 5.00 Prom - 210511 210472   40                              -5.65

 6.04 PlyA - 210628 210623    6                               1.05
 6.03 Term - 214424 214024  401  0  2   55   48   297 0.916  16.69
 6.02 Intr - 219435 219341   95  2  2   53   50    20 0.237  -6.61
 6.01 Init - 220234 220065  170  1  2   60   90   127 0.512   9.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:75803964_76033099|GENSCAN_predicted_peptide_1|328_aa
MQFGVLKVFFKTAQLYLEELQKAFAPRNPVAPLDNNTTYSNDASKDSLLTFRKLLLLLVV
RASMEEKASSLSSGKLLWQLPKQSPLQVHHSTASFGMAVTHCVLVTELPSMVALLTWSSA
YIITSGPCSGAWERDIPNSAKKLATEGSIPREHTAAGGETTARGLAIGGLKEILPVRRTL
SPLRRVTNYGSDLLLTSQSWDLNASLCNYKAHTLLSARSPTPAPIPGPMSYIEAYSQNEG
SKIPQQGKKVAGRLAEALFGVQTYDQDAYGFLTPRKPLENVLQHSERVNQEKRRSGAKEQ
EMQQKRQEEIHTMVQRHARMPDVPWAES

>gi568815583f:75803964_76033099|GENSCAN_predicted_CDS_1|987_bp
atgcagttcggggtcttaaaggtcttcttcaagacagcacaattatatttagaagaactg
caaaaagcatttgcccccagaaatcctgtggccccattggataacaatactacctattcg
aatgatgccagcaaggactctcttctcacattcaggaagctgctactgctgctggtggtg
agggcttccatggaggagaaagcatcctccttatcttctgggaagctcctctggcagctc
cccaaacaaagccctttgcaagtgcaccacagcactgccagctttgggatggctgtaact
cactgtgtgctggtcaccgagctcccctccatggttgccttgttgacatggagcagtgcc
tatatcataaccagtggcccttgctcaggtgcctgggaaagggacataccaaacagtgca
aagaaacttgcaactgaaggcagcatccccagggaacacaccgctgctggtggcgaaacg
acagcaagaggcctcgcaatcggaggtctcaaagagatcttgccggttaggcggacactt
tctccacttcgcagggtaaccaactatggatcagatcttcttctgacatcacagagctgg
gacttgaatgcaagtctgtgtaactacaaagcccacactctgctctctgccaggagcccc
actcctgccccgatccctgggccgatgagttatatcgaggcctatagccaaaatgaaggc
tcaaagattccccagcaggggaagaaagtggctggcaggctggcagaagccctttttggg
gtccagacttatgaccaggatgcctatggcttcctaacccccaggaagccactggaaaat
gtgctgcaacacagtgagagagtaaaccaggaaaaaagaagatctggggccaaggaacag
gagatgcaacagaagaggcaggaggaaattcacacgatggtgcagagacatgccaggatg
ccagatgtgccatgggctgagagctga

>gi568815583f:75803964_76033099|GENSCAN_predicted_peptide_2|1051_aa
MKSWDTSRQQPPGAKPSSWVNGWFESKGGSSESGEKVLTGTQAGEKVLTGTQASEAVART
RVKVAEVTLVRLAGAAPSAKLRSRPQGLALVCSGADVAGAIRHARVRLQAGGGGARGSPA
PPRLLGPGRQLAPSLQSADEGKMSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQF
LVPQQGSPHSLPPPLTLHCNITPIVFKFAFKEKLTMRMDSLTEEKLECRLWCCLSDPSPP
GLAARCCVLERSIVPSLRQVVLSVYSCGPSLVCKPRKWIGERRYAPGLLPGKITNPRLGK
GIEVLSFSIKVYREAIRREIDVGYWSKLQNILLVIIGVKESYPSSSPIWFVDSEDPNLTS
VLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEE
EEEEEMAEVFLREGDVSGSQDNSGERVSRQTREQRSLHHRQALRRFFPISVDGTYNRVLY
RDIPLPRDGQEADAFLLSQLQEACLPLILIFLSTDPLRVSGWGTDIEDLDHYEMKEEEPI
SGKKSEDEGIEKENLAILEKIRKTQRQDHLNDNFPFDPPFVRVVLPVLSGGIRPNLKNEE
NSSERITERSTPRSTGSRRGNAPALPRPPSPSSRKWRGRLLNPRSTFVLSNLAEVVERVL
TFLPAKALLRVACVCRLWRECVRRVLRTHRSVTWISAGLAEAGHLEGHCLVRVVAEELEA
SSKGCHAQSFADSVQILPVVPNVRILPHTVLYMADSETFISLEECRGHKRVTPMGSGSNR
PQEIEIGESGFALLFPQIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFG
YNCCKVGASNYLQQVVSTFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHR
IQSATVLLNEDVSDEKTAEAAMQRLKAANIPEHNTIGFMFACVGRGFQYYRAKGNVEADA
FRKFFPSVPLFGFFGNGEIGCDRIVTGNFILRKCNEDSRTLARNRKTHPEFHVESEGIPN
SQVSLEKEEQIGGLKPAEFKTYYNATVIKTM

>gi568815583f:75803964_76033099|GENSCAN_predicted_CDS_2|3156_bp
atgaaatcatgggacacctccaggcaacagcctccaggggctaaaccatcgtcttgggta
aatggatggtttgagagcaaaggcgggagcagcgagtccggtgagaaggtcctcacagga
acccaggctggtgagaaggtcctcacaggaacccaggctagcgaagcggtggctcggact
agggtgaaagtagcggaggtaacgctggtgaggttagcgggtgccgcgccgagcgccaag
ctgaggagccgcccccaggggctggcgctagtctgcagcggcgccgacgtggccggcgcg
atccgccacgcacgtgtccggctccaggccgggggcgggggcgcgcgggggtctccggct
cctccccgacttctggggcccgggcgccagctggccccgagcctccagtccgcggatgag
gggaagatgtccgtgtcagggctcaaggccgagctgaagttcctggcgtccatcttcgac
aagaaccacgagcgattccgcatcgtcagttggaagctggacgagctgcactgccagttc
ctggtgccgcagcagggcagcccgcactcgctgccgccgccactcacgctccactgcaac
atcacgccaattgtttttaagtttgcgtttaaggagaaactgacaatgagaatggactcg
ttgacggaggaaaagttggaatgcagactctggtgctgtttgagcgacccctctcccccg
ggcctggctgcgcgctgctgtgttctggaaaggagcatagtaccgtcgttgcggcaggtg
gtgttgagtgtgtattcgtgtggcccctcccttgtgtgtaagcctcgaaaatggataggt
gaaaggagatacgcgccagggctgctccccggaaagatcacaaacccaaggcttggtaaa
ggaattgaagtattaagtttctccataaaagtgtatcgtgaagctattcgtcgtgaaatt
gatgtaggatattggtccaaactgcagaatattctcttggttataataggcgtcaaggaa
tcctatccatcttcttcaccgatatggtttgtggattctgaagacccaaatctgacatca
gttctggaacgtctagaagatactaagaacaacaatttgcttcgtcagcaattgaagtgg
ttgatatgtgaactctgcagtttatataaccttcctaagcacctggatgttgagatgcta
gatcaaccactacccacgggtcagaatgggacaacagaagaagtgacttcagaagaagag
gaagaagaagaagagatggctgaagtgtttctccgagagggggatgtgtcagggtcacaa
gacaatagtggggagagggtcagcagacaaacacgtgaacaaaggtctttgcatcataga
caagccctaaggcggtttttccctatctcagtagatggaacgtacaatcgggttttatac
cgagacattccattgcccagggacgggcaggaggcagatgccttcctcttgtctcaactg
caagaggcatgccttcctcttatactaatcttcctcagcacagaccctttacgggtgtca
ggctgggggacggatatagaagacttagatcactatgagatgaaggaagaagagcctatt
agtgggaaaaagtcagaggatgaaggaattgaaaaagaaaatttggcaatattagagaaa
attaggaagactcaaaggcaagaccatttaaatgataactttccatttgatcctccattt
gttcgagtggtgttacctgttctctcaggaggcattagacccaatctcaaaaatgaagaa
aacagttccgagcgtattacggaacggagtacacctcggagtacgggctccagacgaggg
aacgcaccggcgttgccacgcccaccttccccgtccagccggaagtggcgcggacgcctg
ctcaacccgcggagcaccttcgtgttgagtaacctggcggaggtggtggagcgtgtgctc
accttcctgcccgccaaggcgttgctgcgggtggcctgcgtgtgccgcttatggagggag
tgtgtgcgcagagtattgcggacccatcggagcgtaacctggatctccgcaggcctggcg
gaggccggccacctggaggggcattgcttggttcgcgtggtagcagaggagcttgaggca
agtagcaaggggtgtcatgcacagtcatttgcagactcggttcagattttgccagttgtc
ccaaatgttcgcatcttaccacatacagttctttacatggctgattcagaaactttcatt
agtctggaagagtgtcgtggccataagagagtgactccaatgggatcaggtagcaatcga
cctcaggaaatagaaattggagaatctggttttgctttattattccctcaaattgaagga
ataaaaatacaaccctttcattttattaaggatccaaagaatttaacattagaaagacat
caactcactgaagtaggtcttttagataaccctgaacttcgtgtggtccttgtctttggt
tataattgctgtaaggtgggagccagtaattatctgcagcaagtagtcagcactttcagt
gatatgaatatcatcttggctggaggccaggtggacaacctgtcatcactgacttctgaa
aagaaccctctggatattgatgcctcgggtgtggttggactgtcatttagtggacaccga
atccagagtgccactgtgctcctcaacgaggacgtcagtgatgagaagactgctgaggct
gcgatgcagcgcctcaaagcggccaacattccagagcataacaccattggcttcatgttt
gcatgcgttggcaggggctttcagtattacagagccaaggggaatgttgaggctgatgca
tttagaaagttttttcctagtgttcccttattcggcttctttggaaatggagaaattgga
tgtgatcggatagtcactgggaactttatattgaggaaatgtaatgaggacagtagaaca
cttgcaagaaatagaaaaacccatcctgaatttcatgtggaatctgaagggatcccaaat
agccaagtcagtcttgagaaagaagaacaaattggaggacttaaacctgcagagtttaaa
acttactataatgctacagtaatcaaaacaatgtga

>gi568815583f:75803964_76033099|GENSCAN_predicted_peptide_3|163_aa
MGKDFVTKTPKAMATKAKIDKWDLIKLKSFCTAKETIIRVNRQPTECEKIFAIYPSDKGL
ISRIHKELKQIYKKKTNNPIKKCVENYTGARCEEVFLPGSSIQTKSNLFEAFVALAVLVT
LIIGAFYFLCRKGHFQRASSVQYDINLVETSSTSAHHKCSVTW

>gi568815583f:75803964_76033099|GENSCAN_predicted_CDS_3|492_bp
atgggcaaagacttcgtgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtg
aacaggcaacctacagaatgtgagaaaatttttgcaatctatccatctgacaaagggcta
atatccagaatccataaggaacttaaacaaatttacaagaaaaaaaccaacaaccccatc
aaaaagtgcgttgaaaactatacaggagctcgttgtgaagaggtttttctcccaggctcc
agcatccaaactaaaagtaacctgtttgaagcttttgtggcattggcggtcctagtaaca
cttatcattggagccttctacttcctttgcaggaaaggccactttcagagagccagttca
gtccagtatgatatcaacctggtagagacgagcagtaccagtgcccaccacaaatgttca
gtgacatggtaa

>gi568815583f:75803964_76033099|GENSCAN_predicted_peptide_4|130_aa
MRKNQCKKAENSKSQNASSPPKDHNSLPAREQNWMENEFDKLTEVGFRRWVITNSFKLNE
HVLTQYKEAKNLEKRLEELLTGRTSVEKNISDLMELKNIAREFRKAYTGINRQIDQVEER
ISDVEDQLMK

>gi568815583f:75803964_76033099|GENSCAN_predicted_CDS_4|393_bp
atgaggaaaaaccagtgcaaaaaggctgaaaattccaaaagccagaacgcctcttctcct
ccaaaggatcacaactccctgccagcaagggaacaaaactggatggagaatgagtttgac
aaattgacagaagtaggcttcagaaggtgggtaataacaaactccttcaagctaaacgag
catgttctaacccaatacaaggaagctaagaaccttgaaaaaaggttagaggaactgcta
actggaagaaccagtgtagagaagaacataagtgacctgatggagctgaaaaacatagca
cgagaatttcgtaaagcatacacgggtatcaatagacaaatcgatcaagtggaagaaagg
atatcagatgttgaagatcaattgatgaaataa

>gi568815583f:75803964_76033099|GENSCAN_predicted_peptide_5|243_aa
MGKDFVTKTPKAMATKAKTDKWDLIKPKSFCTAKETLVRVNRQPTEWEKIFAIYSSEKGL
ISRIYKELKQIYKKKTNNPIKNLHENENDNNEDLYDDLLPLNEYDLGGHVLQVSGPRDGE
GLPDWHWALDSSTVDNRQYGTVIPERRRTSLEIPLIFRAPFLETRWLKHQKLLRFLEDGK
SKVKVLADSVGGEGPLSGLQMDIFVLHTYMAERGRAEASSELVIEIYFFPGDRKAFIAHF
LLL

>gi568815583f:75803964_76033099|GENSCAN_predicted_CDS_5|732_bp
atgggcaaagacttcgtgactaaaacaccaaaagcaatggcaacaaaagccaaaactgac
aaatgggatctaattaaaccaaagagcttctgcacagcaaaagaaactctcgtcagagta
aacaggcaacctacagaatgggagaaaatttttgcaatctattcatctgagaaagggcta
atatccagaatctacaaggaacttaaacaaatttacaagaaaaaaaccaacaaccccatc
aaaaatctacacgaaaatgaaaatgacaacaatgaagacctttatgatgatctacttcca
cttaatgaatatgaccttggaggccatgttctccaggtgtcagggccaagagatggagaa
gggctgcctgactggcattgggcattagacagtagtacagttgacaacaggcagtacggg
acagtgatccctgagagaaggagaacaagcttagagatccctctaatcttccgggctccc
ttcctggagacaagatggcttaaacatcagaaacttctccgatttctggaggatgggaag
tccaaggtcaaggtgctagctgattcagttggtggtgagggccctctttctggtttgcag
atggacatcttcgtgctgcatacttacatggcagagagagggagagcggaagcctcatct
gagttagtgattgaaatatacttctttcctggggaccgcaaagctttcatagctcacttc
ctgctgttgtga

>gi568815583f:75803964_76033099|GENSCAN_predicted_peptide_6|221_aa
MLARGSLQGCFLGPRLTCWQLGGLGAGELGVAHESVSQALIAGMGPLGKPEVSQQERESL
SCLQINLIQAWQTVPQRLDDSPLLPITVGSHSSPAREQNWMENEFDKSTELGFRRWVITN
SSKLKEDILTQCKEAKNHEKRLEELLTGISSLEKNISDLIELKNIARELQQAYTSINSQI
DQVEERISEIEDQLNEIKCEDKIREKRLKRNKRASKKYGTM

>gi568815583f:75803964_76033099|GENSCAN_predicted_CDS_6|666_bp
atgctagccaggggcagcctgcagggctgtttcttaggcccaagacttacatgttggcag
cttggaggcctaggggcaggtgagctaggagtagcccatgaatctgtttctcaggctctg
attgcaggcatggggcctttgggcaagccagaggtgtctcagcaggagagggaaagtctc
tcctgtctccaaatcaatctgatccaggcatggcagacagtgccacagaggctagatgac
tctccgttgcttccaatcactgtaggatcacactcctcgccagcaagggaacaaaactgg
atggagaatgagtttgacaaatcgacagaattaggcttcagaaggtgggtaataacaaac
tcctccaagctaaaggaggatattctaactcaatgcaaggaagctaagaaccatgaaaaa
aggttagaggaattactaactggaataagcagtttagagaagaacataagtgacctgatt
gagctgaaaaacatagcacgagaacttcaacaagcatacacaagtatcaatagccaaatc
gatcaagtggaagaaaggatatcagagattgaagatcaacttaatgaaataaagtgtgaa
gacaagattagagaaaaaagattgaaaagaaacaaacgagcctccaagaaatatgggact
atgtga