GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:55:36

Sequence gi568815583f:32630691_32831242 : 200552 bp : 40.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3243   3351  109  0  1   93   86    89 0.996   8.57
 1.02 Intr +   5087   5225  139  1  1  105   83   137 0.999  14.02
 1.03 Term +   5567   7155 1589  0  2   58   32   903 0.966  71.10
 1.04 PlyA +   7186   7191    6                               1.05

 2.00 Prom +   7823   7862   40                              -9.25
 2.01 Init +  12903  13128  226  2  1   62   63   232 0.705  14.78
 2.02 Intr +  21453  21655  203  1  2  -23  103    86 0.002  -2.92
 2.03 Intr +  28624  28728  105  0  0   93   73    88 0.861   7.29
 2.04 Term +  32961  33290  330  2  0   63   37   158 0.495   1.87
 2.05 PlyA +  33994  33999    6                               1.05

 3.00 Prom +  34036  34075   40                              -2.05
 3.01 Init +  35588  35664   77  1  2   87   92    19 0.820   2.81
 3.02 Intr +  39415  39624  210  1  0   48   48   115 0.055   0.61
 3.03 Intr +  41208  41379  172  0  1  104   38    82 0.319   3.82
 3.04 Intr +  42330  42451  122  2  2   49   94    58 0.303   0.87
 3.05 Intr +  47014  47171  158  1  2   64   76    77 0.751   2.83
 3.06 Intr +  49076  49225  150  0  0  112   92   163 0.993  18.31
 3.07 Intr +  53867  53979  113  0  2   70  106   108 0.943   9.98
 3.08 Intr +  55572  55720  149  2  2   -8   76   111 0.368  -1.59
 3.09 Intr +  60279  60484  206  0  2  105   20    71 0.165  -0.08
 3.10 Intr +  61020  61073   54  1  0  104   54    96 0.096   5.83
 3.11 Term +  75414  75553  140  1  2   99   37   122 0.487   5.34
 3.12 PlyA +  75805  75810    6                               1.05

 4.08 PlyA -  76079  76074    6                               1.05
 4.07 Term -  86911  86690  222  1  0    7   47   267 0.020  10.43
 4.06 Intr -  87235  87193   43  0  1   42   41    47 0.017  -7.28
 4.05 Intr -  87464  87336  129  1  0   34   38   222 0.045  10.69
 4.04 Intr -  87674  87488  187  0  1  118   73    50 0.489   4.33
 4.03 Intr -  88088  87729  360  0  0   44   -2   308 0.182  11.67
 4.02 Intr -  88459  88301  159  2  0   40   45   116 0.368   1.54
 4.01 Init -  95023  94459  565  1  1   71   15   201 0.157   6.35
 4.00 Prom -  98734  98695   40                              -7.05

 5.00 Prom +  99086  99125   40                              -8.65
 5.01 Sngl + 100001 100555  555  1  0   20   46   733 0.991  56.17
 5.02 PlyA + 101821 101826    6                               1.05

 6.08 PlyA - 102114 102109    6                               1.05
 6.07 Term - 106351 106144  208  0  1   76   41   117 0.251   1.63
 6.06 Intr - 123872 123801   72  1  0   84   67   106 0.165   5.70
 6.05 Intr - 130343 130090  254  2  2   48   61   146 0.059   3.21
 6.04 Intr - 146229 146145   85  2  1  122   85    60 0.652   8.00
 6.03 Intr - 168263 168114  150  1  0   88  116    61 0.799   7.26
 6.02 Intr - 173642 173591   52  0  1   60  121    47 0.892   2.25
 6.01 Init - 176156 175949  208  2  1   54   80   169 0.933  11.73
 6.00 Prom - 181653 181614   40                              -3.85

 7.02 PlyA - 181836 181831    6                               1.05
 7.01 Term - 195712 195507  206  2  2   84   44   105 0.414   2.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  25588  25416  173  2  2  120   38   145 0.915   9.71
S.002 Init -  26173  26035  139  1  1   89  -33   120 0.806   0.35
S.003 Intr -  86969  86631  339  0  0  118   76   207 0.923  17.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:32630691_32831242|GENSCAN_predicted_peptide_1|612_aa
XVESGKAGCFSPKISHKEKVRRSLRLKFNLGKNGREVNGCSGVNRYESVGWRLANQQSLK
NRIESVKTGLLFSPDVDEKLPKKGSEKISKSEETLLTPERLVGTNYRMSWTGPNNSSFQE
VDANEASSMVENLEVENSLEPDIMVEKSPATSCELTPSNLNNKHNSNITSSPLSGDENNM
TKETLVKVQKAFSESGSNLHALMNQRQSSVTNVGKVKLTEPSYLEDSPEENLFETNDLTI
VESKEKYEHHTGKGEKCFSERDFSPLQTQTFNRETTIKCYSTQMKMEHEKDIHSNMPKDY
LSKQEFSSDEEIKKQQSPKDKLNNKLKENENMMEGNLPKCAAHSKDEARSSFSQQSTCVV
TNLSKPRPMRIAKQQSLETCEKTVSESSQMTEHRKVSDHIQWFNKLSLNEPNRIKVKSPL
KFQRTPVRQSVRRINSLLEYSRQPTGHKLASLGDTASPLVKSVSCDGALSSCIESASKDS
SVSCIKSGPKEQKSMSCEESNIGAISKSSMELPSKSFLKMRKHPDSVNASLRSTTVYKQK
ILSDGQVKVPLDDLTNHDIVKPVVNNNMGISSGINNRVLRRPSERGRAWYKGSPKHPIGK
TQLLPTSKPVDL

>gi568815583f:32630691_32831242|GENSCAN_predicted_CDS_1|1839_bp
nnagtggaatcaggaaaagcaggctgcttttctcctaaaatcagccataaagaaaaggtt
cgaagatctctgcgtttgaaattcaatctagggaaaaatggcagagaagtaaatggatgt
tctggtgtcaatagatatgaaagtgttggttggcgacttgcaaatcaacaaagtttaaaa
aatcgaattgaatctgtaaaaacaggtttgctttttagcccagatgttgatgaaaagtta
ccaaagaaaggttcagaaaagatcagtaagtctgaggaaaccttactaactccagagcga
ctagttggaacaaattaccggatgtcttggacaggacctaataattcaagttttcaagaa
gtagatgcaaatgaagcttcttcaatggtggaaaatcttgaggtagaaaactctttggag
cctgatattatggtagaaaagtcacctgctacttcatgtgaactcaccccttccaattta
aacaataagcataatagcaacataacaagtagccctcttagcggggatgaaaataacatg
accaaagagactttggtgaaagttcaaaaagcgttttctgaatctggaagtaatcttcac
gcattgatgaatcagaggcagtcatcagtaactaatgtggggaaagtaaaattaactgaa
ccatcttatttagaagatagcccagaggaaaatctatttgaaactaatgatttgactata
gtagaatcaaaggagaaatatgaacaccacactggtaaaggtgaaaaatgtttttcagag
agggacttttcaccccttcaaactcaaacatttaatagagaaacaactataaaatgttat
tcaactcagatgaagatggaacatgaaaaagacattcattcaaatatgccaaaagattat
ttaagcaagcaagaattctccagtgatgaagaaataaagaaacagcagtccccaaaggat
aaactaaataataaattaaaagagaatgagaatatgatggaaggtaacttaccgaagtgt
gcagcacatagcaaggacgaggctagatcctctttctcacagcagagtacatgtgttgta
acaaacttgtcaaaacctaggcctatgagaattgctaaacagcagtcattggaaacatgt
gagaaaacagtttctgaaagttcacaaatgacagaacatagaaaggtttctgatcacata
cagtggtttaacaagctttctttaaatgaaccaaatagaataaaagtcaagtcacctctt
aagtttcagcgtactcctgttcgtcagtccgtcagaagaattaattctttgttggagtat
agcagacaacctacagggcataagttggcgagtcttggtgatacagcttctcctttggtc
aaatcagtgagctgtgacggtgctctttcctcttgtatagaaagtgcatcaaaagattcc
tctgtttcatgtatcaaatcaggtcctaaagaacagaagtccatgtcatgtgaagagtca
aatattggtgcaatttcaaagtcaagcatggagttaccctcgaaatctttcttaaagatg
aggaagcacccagattcagtgaatgcttctcttaggtctactacagtttataaacagaag
atcttatctgatggccaagttaaggttcccttggatgatctgactaatcatgatatagta
aaaccagttgtaaataacaacatgggcatttcttctgggataaataacagggtccttagg
agaccatcagaaagaggaagggcctggtacaaaggttctccaaaacatcctatcggaaaa
actcaattactaccaacaagtaaacctgtagatttgtaa

>gi568815583f:32630691_32831242|GENSCAN_predicted_peptide_2|287_aa
MVSRMVSTMLSGLLFWLASGWTPAFAYSPRTPDRVSEADIQRLLHGVMEQLGIARPRVEY
PAHQAMNLVGPQSIEGSAERSHEIVKTTGCQVFTGGSNTEVTALWGLWAEPALGSSGGPP
YLQGIEGINKEEMQRINVFPECQVIVHLDIFDYKLPECQTRTSHGKLDDPRCPVGGSAEF
KYGSSRESELLGIFFSATSDSNDCLAVSSGTQVLNRGMRRKWHFPADGLYQLQLQVQCLL
WERSHSLVIRHIYTATLVYVRLSSLTRHDNSAYLKAIKPMILALFTV

>gi568815583f:32630691_32831242|GENSCAN_predicted_CDS_2|864_bp
atggtctccaggatggtctctaccatgctatctggcctactgttttggctggcatctgga
tggactccagcatttgcttacagcccccggacccctgaccgggtctcagaagcagatatc
cagaggctgcttcatggtgttatggagcaattgggcattgccaggccccgagtggaatat
ccagctcaccaggccatgaatcttgtgggcccccagagcattgaaggatcagcagagagg
tcacatgaaatagtaaaaaccactgggtgtcaagtgttcactgggggtagcaacacagaa
gttactgctttgtgggggctttgggcagagccggctctggggagtagtgggggcccacca
tacctgcagggcattgaggggataaacaaggaagaaatgcaacgtataaatgtgttccca
gaatgtcaggtgattgttcacttggacatatttgattataagctcccagagtgtcagaca
cggacttctcatggcaagttagacgatcccaggtgcccagtgggtggcagtgcagaattc
aaatatggtagttccagggagtctgagctgcttgggatttttttcagtgccaccagtgat
tctaatgattgtctagctgtaagcagtgggactcaagttttgaacagaggcatgagaaga
aaatggcatttccctgcagatgggctgtaccagctgcagcttcaagtccagtgcctcttg
tgggaaaggagccactcccttgtcattcgccacatctacactgcaacgctggtttatgtc
agactatcatctttgactcggcatgacaacagtgcatatttgaaggccatcaaaccaatg
atattagccttgtttacggtttag

>gi568815583f:32630691_32831242|GENSCAN_predicted_peptide_3|516_aa
MPALIKLLVKELQKKHIYWAFSHWLRSLSFLDPSMRGKSRRRKRRNENKCLSRQNIRMGF
ILLICQQAQPNLDLSYKDRIVPARVSALAGYVGQSLLGSLAASPPSLLVSSGALALAPSA
LSESEGKPKEARRCLECPIRLLQAPRPLTKGKLPQPGEPLHRGGTSSGSPTDIAYTMRTH
VQGRCLPLIPTELAGTVSVGLLCPHGVGKYEILLRNDLLWSWKRKLHEPYRMLRLQGKKV
QKLTYIGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPVGKTADDG
CLENTPDTAEFSREFQLHQHLFDPEHDYPGLGKWETEIIKAFYKRSYFDGILKDEVKGEE
TNPRQEENMGSHFSYDDCEHREEGLSVLSFIISIEGKSVEHVSDILELIEAHYVFEIQQC
VETLTQTVVTEPCPPTQHNFPFCQEVFWQFLKEQETPLREDEGRRETKAEVTLIHSEFGE
TLHTIATRNGVRMGEYKSPGGKVVEHRDSTALREAC

>gi568815583f:32630691_32831242|GENSCAN_predicted_CDS_3|1551_bp
atgcctgctcttataaagcttctagtaaaggaactacaaaagaaacacatctactgggca
ttctcacactggctgaggagcctgagttttttagatcctagtatgagggggaaaagcaga
agaagaaagagaaggaatgaaaacaaatgcctttcaagacaaaatatccgaatgggtttc
attttgcttatctgccaacaggctcaacccaatttagatctctcctacaaggacaggata
gtgccagccagggtgtctgcccttgccggctatgtggggcagtccctcctggggagcctt
gccgcctctccaccttctctcctggtctcctcgggcgctctcgcgctggcaccttcagct
ctgtcagagtctgaggggaaaccaaaggaggccaggcggtgtctggaatgccccatccga
ctgcttcaggctcccagaccgctgacaaaaggaaaactgccccagccaggagagccgttg
catcgtggtgggacatcatcaggctctccaacggacatcgcttatactatgagaactcac
gttcaagggaggtgtttacctctaattcccacagaactagcgggaactgtgagtgtgggg
ctcctctgtcctcatggagttggtaagtatgaaatccttctaagaaatgatctgctgtgg
tcctggaaaaggaagcttcatgagccttatagaatgttaaggctacaaggaaagaaagtc
cagaaattaacatacattggtggagctcatgaaggacttcagcatttgggtccttttggc
aacatccccaacatcgtggcagagttgactggagacaacattcctaaggactttagtgag
gatcaggggtacccagaccctccaaatccctgtcctgttggaaaaacagcagatgatgga
tgtctagaaaacacccctgacactgcagagttcagtcgagagttccagttgcaccagcat
ctctttgatccggaacatgactatccaggcttgggcaagtgggagactgaaataataaaa
gccttctataaaagaagttattttgatggcatattaaaggatgaagtaaaaggagaagag
actaaccctagacaggaagaaaatatggggagtcatttcagttatgatgactgtgaacac
cgtgaagaagggttaagtgttctgtcttttataatctcaatagaagggaaatctgttgag
catgtgtctgatattctagagctcattgaagcccactatgtgtttgaaatacagcaatgt
gtggaaacacttacacaaactgtggtaacagagccctgccccccgacccaacataacttt
cctttctgccaagaagttttttggcagtttttaaaagaacaagaaactcctttacgagaa
gatgaagggaggagagagacgaaagcggaggtgactctgatacacagtgaatttggggaa
acattgcacacaattgcaaccagaaatggtgtgagaatgggtgaatacaaaagccccgga
gggaaggttgtagaacacagggactccactgctctacgagaagcctgctaa

>gi568815583f:32630691_32831242|GENSCAN_predicted_peptide_4|554_aa
MGKDFMTKTPKAMATKAKTDKLDLIKLNSFCMAKETTIRVNRQPTEWEKIFAVYPSDKGL
ISRIYQELKQIYKKKANNPIKKWAKDMNRHFSKEDIYGASKHMRKSSSSVVIREMQIKTT
MRYHFTPVRMAVIKESGNNRCWRGCGEIGMLLHCWWECKLVQPLWKTVWQFLKDLEPEIP
FDPGILLLAVEGPAEPARQRERTKDAQLVAAANPPQPPVPSPQELVRRCKARLGPLEHSL
RAVGLPTVRFSAVAEHSGSALASLHLTSGIGKCTHHGFSGCSNPRTPMGAPRRPQTQRGA
PSTWDPLKATRRAVSGRLAGPDAPALWRPGLRALAKRARLPGAAATSTRSVFGGLREVET
GYPEQRGHGVRGLSRKDPAMVLHNSPPRTTHPSLRARRAAARGTERVLGWFAALFPPPTH
IPAGAAGPRGLRFRRVALSAAAARAAGARRGVSGTESDAAAVHWVARRRRRRQTRYPPPF
PRRLRWEERDLRGIVPDSAILPLWRERDCGMLWSSGRRGSPAAPPEAPNFEGADPGAPVN
LAGSLAASRSLSPT

>gi568815583f:32630691_32831242|GENSCAN_predicted_CDS_4|1665_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaactgac
aaattggatctaattaaactaaacagcttctgcatggcaaaagaaactaccatcagagtg
aacaggcaacctacagaatgggagaaaatttttgcagtctatccatctgacaaagggcta
atatccagaatctaccaggaactcaaacaaatttacaagaaaaaagcaaacaaccccatc
aaaaagtgggcaaaggatatgaacagacatttctcaaaagaagacatttatggggccagc
aaacatatgagaaaaagctcatcatcggtggtcattagagaaatgcaaatcaaaaccaca
atgagataccatttcacgccagttagaatggccgtcattaaagagtcaggaaacaacaga
tgttggagaggatgtggagaaataggaatgcttttacactgttggtgggagtgtaaatta
gttcaaccgttgtggaagacagtgtggcaattcctcaaggatctagaaccagaaatacca
tttgacccaggaatcctattactggctgtggaggggccagcggagccagccaggcagcga
gagagaacgaaagacgcccagctcgttgcagccgccaacccgcctcagccgccagtccct
agtcctcaggagctagtgaggcgctgcaaggcgaggctggggcctctagaacacagttta
agggctgtcggattacccaccgttcggttttccgctgtggctgaacacagcggctctgcc
cttgccagtctccatctcacctcggggatcggcaaatgcacacatcatggattctccgga
tgctccaacccgcggactccaatgggcgccccaagacgcccccagacccagcgcggcgcc
ccaagcacatgggaccctctcaaggcaactcgccgcgcagtcagcggccgactagcaggt
ccggatgctcctgcgctctggcggcctggacttcgcgccctcgctaagcgggcgcgtctg
ccaggcgctgctgccaccagcaccaggagcgtgttcgggggcctccgggaggtggaaacg
ggatacccagagcagcgaggtcacggtgtccgcggcctcagcaggaaggaccccgcgatg
gttcttcacaattcacccccgcgaacaacgcacccgagcctgcgcgcacggagggctgcc
gcgcgtggaactgagcgggtcctgggttggtttgcggccctcttccctccgcccactcac
atccctgccggtgcggcgggtcctcggggcctgcgctttcgacgcgtggcgctgagtgcg
gccgcggccagagccgccggggctcggcgcggggtcagcgggaccgagagtgacgcggcg
gccgtgcactgggtcgcccggcgccgccgccgccgccagacccgctatccgccccctttc
ccgcggagactgcgctgggaagagcgagatctccgtgggatcgtgccagattcggccatt
cttcccctctggagggaacgggactgcgggatgctctggtcgagcggccgtcgtggctcc
ccggcggccccgcccgaggcccccaacttcgagggcgctgaccccggcgcccccgttaac
ctggcgggctcgctggccgccagcaggagcctgtcgccaacatga

>gi568815583f:32630691_32831242|GENSCAN_predicted_peptide_5|184_aa
MSRTAYTVGALLLLLGTLLPAAEGKKKGSQGAIPPPDKAQHNDSEQTQSPQQPGSRNRGR
GQGRGTAMPGEEVLESSQEALHVTERKYLKRDWCKTQPLKQTIHEEGCNSRTIINRFCYG
QCNSFYIPRHIRKEEGSFQSCSFCKPKKFTTMMVTLNCPELQPPTKKKRVTRVKQCRCIS
IDLD

>gi568815583f:32630691_32831242|GENSCAN_predicted_CDS_5|555_bp
atgagccgcacagcctacacggtgggagccctgcttctcctcttggggaccctgctgccg
gctgctgaagggaaaaagaaagggtcccaaggtgccatccccccgccagacaaggcccag
cacaatgactcagagcagactcagtcgccccagcagcctggctccaggaaccgggggcgg
ggccaagggcggggcactgccatgcccggggaggaggtgctggagtccagccaagaggcc
ctgcatgtgacggagcgcaaatacctgaagcgagactggtgcaaaacccagccgcttaag
cagaccatccacgaggaaggctgcaacagtcgcaccatcatcaaccgcttctgttacggc
cagtgcaactctttctacatccccaggcacatccggaaggaggaaggttcctttcagtcc
tgctccttctgcaagcccaagaaattcactaccatgatggtcacactcaactgccctgaa
ctacagccacctaccaagaagaagagagtcacacgtgtgaagcagtgtcgttgcatatcc
atcgatttggattaa

>gi568815583f:32630691_32831242|GENSCAN_predicted_peptide_6|342_aa
MVFYLRKLEKEILLLRPQCSEGAHRADCGQGVPERRNSKCKDPPMCTLSALKPEAAASEA
GKEGVWERGAKKEHKMEESHLENAQKSFETTVRYFGMKPKSGEKEITPSYVFMVWYEFCS
DFKTIWKRESKNISKERLKMAQESVSKLTSEKKVETKKINPTASLGVVLKYQGHLAMSRD
IFDSQDWEGMLLASSGERPGKLLNFLQGIGHPFHNKQLSDRNFNSPEIRRYQMASALKCL
EQQQHNPFWRLYKKHGTSTCIWREPQAVSTYGGRCGGHLHKQDEMSPKFGLDAETDDVTH
TPREYETFITHMRLFVESSSRLLTWSENDLREPGKETGLGFL

>gi568815583f:32630691_32831242|GENSCAN_predicted_CDS_6|1029_bp
atggtcttttatttacggaagctggagaaggagatacttctgctgagacctcaatgcagt
gagggagcccatcgtgcagactgtggtcagggtgtcccagagaggaggaacagcaagtgc
aaagatcctccaatgtgcacgctcagtgcgctcaagccagaggcagctgccagcgaagct
ggaaaggaaggggtgtgggaaagaggagccaaaaaagagcataagatggaagaaagtcac
ttggagaatgcacagaaaagttttgaaacaacagtacgatattttgggatgaagccaaag
tctggtgagaaggagatcacacccagctacgtgtttatggtgtggtatgagttctgcagt
gacttcaagacaatttggaaacgggagagtaaaaacatatctaaagaaagattgaaaatg
gctcaggaatcagtcagcaagttgacttcagagaagaaagtggagacaaagaaaatcaat
cccactgctagcctgggagtggttctcaagtaccagggacatttggcaatgtctagagac
atctttgatagtcaggactgggaagggatgctgttagcatctagtggggagaggccaggg
aaactcctaaacttcctacaaggcataggacatcccttccacaataaacaattatcagac
agaaatttcaatagtcctgaaataaggcgataccagatggctagtgctctcaagtgcctg
gaacaacagcagcacaatcctttctggaggctgtacaagaagcatggcaccagcacctgc
atctggcgagagcctcaggctgtttccacttatggtggaaggtgtggtggacatctgcat
aaacaagatgaaatgtcaccaaaatttggtttagatgctgagactgatgatgttacacac
accccaagagagtatgaaacatttattactcacatgaggctttttgtggagagcagctca
cgtctcctaacctggtctgaaaatgacttgagagagccaggaaaggagactggtttgggc
tttttatga

>gi568815583f:32630691_32831242|GENSCAN_predicted_peptide_7|68_aa
XQRFSPREFDLSVFQHLHCWPVASQAALSRALESLPLSLESCFSMGCGTLDLTCLPTTLV
KEAAIRPS

>gi568815583f:32630691_32831242|GENSCAN_predicted_CDS_7|207_bp
nggcagcgtttttcccccagggaattcgatctcagtgtctttcaacaccttcactgttgg
cctgtagcctctcaggctgcgctaagcagggccctggagagtcttccactctccctggag
agctgcttctctatgggctgtgggacacttgacctcacgtgtctccccaccacccttgtg
aaagaagcagccattaggccctcttga