GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:22:01

Sequence gi568815583f:31227213_31472296 : 245084 bp : 49.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4506   4567   62  2  2   97  110     3 0.325   4.12
 1.02 Intr +  17182  17392  211  1  1   86  115   136 0.922  15.02
 1.03 Intr +  21414  21550  137  2  2   41    3   150 0.329   1.17
 1.04 Intr +  22760  22809   50  2  2   76  105     1 0.250  -1.08
 1.05 Intr +  24021  24117   97  1  1   91   93    30 0.364   2.87
 1.06 Intr +  29133  29245  113  0  2   98   39    76 0.242   3.72
 1.07 Intr +  34168  34449  282  2  0  101   98    10 0.134   0.69
 1.08 Intr +  39698  39789   92  0  2  118   45    62 0.760   4.61
 1.09 Term +  40758  40952  195  2  0   59   42   172 0.869   7.11
 1.10 PlyA +  44976  44981    6                               1.05

 2.00 Prom +  65020  65059   40                              -5.16
 2.01 Init +  73738  73836   99  0  0   49   48   182 0.342   8.68
 2.02 Intr +  76977  77085  109  2  1   56   85    52 0.449   1.56
 2.03 Term +  79610  79707   98  0  2   65   44   146 0.494   6.03
 2.04 PlyA +  83826  83831    6                               1.05

 3.00 Prom +  89832  89871   40                              -3.06
 3.01 Init + 100001 100577  577  1  1   85   82   795 0.980  73.90
 3.02 Intr + 107050 107137   88  2  1   42  105    24 0.005  -1.47
 3.03 Intr + 120575 120660   86  2  2  106   93    21 0.011   3.86
 3.04 Term + 144798 145087  290  1  2  135   52   578 0.999  54.44
 3.05 PlyA + 147607 147612    6                               1.05

 4.00 Prom + 148355 148394   40                              -3.56
 4.01 Init + 148605 148718  114  2  0   95   61    64 0.444   4.61
 4.02 Intr + 151129 151228  100  0  1   57   41    76 0.184  -0.52
 4.03 Intr + 152635 152702   68  2  2  115   94    22 0.316   4.12
 4.04 Intr + 157442 157565  124  1  1   40    8   112 0.015  -1.44
 4.05 Intr + 165994 166109  116  2  2   64   53    96 0.167   3.87
 4.06 Intr + 166396 166479   84  0  0   82  100    24 0.666   3.02
 4.07 Intr + 175348 175466  119  0  2   53   49   139 0.170   5.76
 4.08 Intr + 177545 177646  102  2  0   56   72    85 0.235   2.99
 4.09 Intr + 192972 193427  456  0  0   16   30   343 0.203  13.64
 4.10 Intr + 211294 211348   55  1  1  108   77    44 0.531   4.28
 4.11 Term + 213458 213604  147  1  0   67   55    83 0.345   0.80
 4.12 PlyA + 215413 215418    6                               1.05

 5.10 PlyA - 215950 215945    6                               1.05
 5.09 Term - 226991 226414  578  0  2   34   55   308 0.067  16.73
 5.08 Intr - 228653 228468  186  0  0   67   33   216 0.749  13.66
 5.07 Intr - 229559 229400  160  2  1   33   76    50 0.412  -2.14
 5.06 Intr - 230803 230612  192  1  0   80   47    67 0.305   1.49
 5.05 Intr - 234937 234730  208  0  1  104  116    50 0.396   8.48
 5.04 Intr - 238536 238419  118  1  1  152   99    25 0.888   9.52
 5.03 Intr - 240406 240361   46  1  1   24   89    31 0.520  -5.22
 5.02 Intr - 241579 241433  147  1  0  104   42   150 0.785  12.43
 5.01 Init - 242538 242272  267  0  0   55   91   113 0.561   3.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 166754 166882  129  1  0   63   48    90 0.830   0.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:31227213_31472296|GENSCAN_predicted_peptide_1|412_aa
MTYKYQAGHMFLERRPKHVCSNYTHLEEASAAVKCCCLVLASQDSSIPPAPGEPCSVVAS
PTTRPGLLRMATTELFSNTGATLTSKLLVTMRPSEAIGVHEHSPGPEKTIETAEGGMPSF
HQKLSALQGQRAVIVVGKLRLSELEIPHLSPAAGMQPCLGRGLQTLEDLLSAMDKQPFCQ
TLPIGRKLTSSEEDVQKTAAGDSAAPVGLGKPLPEMAYVPHPESQLVGALYMMGSLRLYL
CLWLLLHFLTDLYDRTAGTCRNPRDSPWLLDLPSALVYSSTQLPLGNQGGPPRMRGHSRQ
QEQHVSGYGAVKGMHLWVVGHCYIAEGISGYTGTCSEQLPQASEQNWAAEGPCGDSGSPS
TQIRVAFESSCCTCGPNLNTCRQLQTWGTMPVQQENVTKCLLHDRGGPEELS

>gi568815583f:31227213_31472296|GENSCAN_predicted_CDS_1|1239_bp
atgacctacaagtaccaggcaggacatatgttcctagagaggagacctaaacatgtttgc
agtaattatacccaccttgaagaagcaagtgctgcagtgaagtgctgctgcctggtcctt
gctagtcaagattctagcatccctcctgctcctggagagccctgctccgtggtagcatct
ccgaccaccagacctggcttgttgaggatggctaccactgagctttttagcaatactggt
gctaccctcaccagcaagctccttgtcaccatgaggccctcagaggccattggagtccat
gaacattctccagggccagagaagaccatagagacagcagaaggaggaatgccctccttc
caccagaagctcagcgctttgcagggccagagggccgttattgtggtagggaaactgagg
ctcagcgaacttgagatccctcacctgagccctgcagctggcatgcagccttgcctggga
aggggcctgcagaccttggaggacttgctcagcgcaatggacaagcagcccttctgtcaa
acactccccataggaaggaaactcacctctagtgaggaagatgtgcagaaaacagcagca
ggagacagtgcagcccctgtgggcttaggaaagcctcttccagaaatggcctatgtgcca
cacccagagtctcagctagtcggggctctttacatgatgggatcattgaggctttatttg
tgcctttggttgttgctgcacttcctcactgacctttatgaccggacagcaggtacttgt
aggaaccccagagactccccctggcttctggaccttccttctgccttggtgtatagcagc
acccagcttccccttggtaatcagggtggaccaccccggatgagagggcactcaaggcag
caggaacagcacgtttcagggtatggagcagtaaaaggcatgcacctttgggtcgtggga
cactgctatattgccgaagggatctcagggtacactgggacctgctccgagcagctccct
caggcgtcagagcagaactgggcagctgaaggcccctgtggagacagcggcagtccgtcc
acccagataagggtagcgtttgagtccagctgctgcacctgtggccctaatctcaacaca
tgccgccagttgcagacctggggaacaatgccagtgcagcaggagaatgtcaccaaatgc
ctgcttcatgacagaggaggtcctgaggagctgagttag

>gi568815583f:31227213_31472296|GENSCAN_predicted_peptide_2|101_aa
MWLLKPPNIDPSVLAGLAGRLVQAQLGSRGEQLPGTAWSGRAPPENLQEEDHWGRRQKLA
AMETVALPLATPADKSHIVGLTAAASTCSLHRGCLEALRRA

>gi568815583f:31227213_31472296|GENSCAN_predicted_CDS_2|306_bp
atgtggctcctgaagcccccaaacatcgacccctcggtgctggctgggctggctgggcgc
ctcgtgcaggcgcagctgggcagccgtggggaacagttgccaggcacagcctggagtggg
agggcaccgcctgagaacctgcaggaggaagaccactggggacgtcgccagaaattggca
gccatggagacagtggcccttcccctcgctaccccggccgacaaaagccacattgtgggg
ctgacggcagctgccagcacctgctccctgcaccgcggctgcctcgaggctctgcgccgc
gcctga

>gi568815583f:31227213_31472296|GENSCAN_predicted_peptide_3|346_aa
MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDGKDSAS
LFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPSP
AWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEKVYGK
SSHLKAHLRTHTAHLNAGPVATGSLSPRAGEGLRRVTLSKSCLWGPGAAYRLQGLGAASV
VVAAALVEQEGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRFMRSDHL
TKHARRHANFHPGMLQRRGGGSRTGSLSDYSRSDASSPTISPASSP

>gi568815583f:31227213_31472296|GENSCAN_predicted_CDS_3|1041_bp
atggcagccgccgcctatgtggaccacttcgccgccgagtgcctcgtgtccatgtcgagc
cgcgcggtcgtgcacgggccgcgggaggggccggagtcccggcccgagggcgcggccgtg
gccgccacccccacgctgccccgcgtcgaggagcgccgcgacggtaaggacagcgcctcg
ctcttcgtggtggcgcggatcctagcggacctcaaccagcaagcgccggcgcccgccccg
gcggagcgcagggagggcgccgcggcccggaaggcgaggaccccctgccgcctgccgccg
cccgcccccgagcccacctcccccggcgccgaaggcgcggcggccgcgccccccagcccg
gcgtggagcgagccggagcccgaggcggggctggagcccgagcgggagccggggcccgcg
gggagcggcgagcccggcctcagacaaagggtccggcggggccgaagtcgcgccgacctc
gagtccccgcagaggaagcacaagtgccactacgcgggctgcgagaaagtttacgggaaa
tcttcgcacctcaaggcgcacctgagaactcacacagcccacctgaatgccggccctgtg
gccacaggcagcctgtctcctagggctggggagggcctacggcgggtgacactctctaag
tcctgcctctggggccctggggcagcatataggctgcaggggttgggggctgcctctgtt
gtagtggctgcagcgctggtggaacaggaaggtgagaggcccttcgcctgcagctggcag
gactgcaacaagaagttcgcgcgctccgacgagctggcgcggcactaccgcacacacacg
ggcgagaagaagttcagctgccccatctgcgagaagcgcttcatgcgcagcgaccacctg
accaagcacgcgcgccgccacgccaacttccacccgggaatgctgcagcggcgcggcggg
ggctcgcggaccggctccctcagcgactacagccgctccgacgccagcagccccaccatc
agcccggccagctcgccctga

>gi568815583f:31227213_31472296|GENSCAN_predicted_peptide_4|494_aa
MVLEVPYLHPAAPPPTTLECKIASLLTLTLFPGPTPRQLPKFLQPTTGTDPKVCSSEDES
QDTGSLGSRKAGLGLEVRFVAVRRSAVSGCIVTQMSTNIHERTFGHTPNALNMSTQGQTR
PKAVHTLVQRDDIELTPTLLGLLGPPSGMQRSVSSRRARPSAFAFPGPDMEVTELQPLRC
SKTREEAKTELSQPGIAALALKGLVLRSDLAVSGTGTQGCPAIPPPGAEELSPAAAAAQS
PRAVTLTVKVQDFILAVSETTNPLERTNSRHGKAARAELSGGAAQNPVGKRLQQELMTLM
ISGDKGISAFLESDNLFKWVGTIHGAAGTVYEDLRYKLLLEFPSGYPYNEPTVKFLTSCY
HPNIDTQGNICLDIWKDKSSVLYGIRTILVSIQSLLGEPNIDSPLNMHAVEFWKNPTAFT
FKKPIQSRLLPQTSSPSSKLIINNSKVHYGHPSRQDQIPRGLSQRPDPKPGLWQLAPFLQ
VSWNRFALAGLVVD

>gi568815583f:31227213_31472296|GENSCAN_predicted_CDS_4|1485_bp
atggtcctggaggtgccctacctgcatcctgctgcacccccacccacgacactcgagtgc
aagatcgcctcactcctaaccctgactttattcccaggccccacaccgaggcagctacca
aagttcctacaacctaccacgggcactgaccccaaagtgtgctccagcgaggacgagtcc
caggacactgggagtctggggagtaggaaggcaggacttggattagaagtcaggtttgtg
gcagttaggcgaagtgctgtgtctggctgcatagtgacccagatgtccaccaacattcat
gagcgtacttttggacataccccaaatgccctcaacatgtccacacaaggacagacacgc
ccaaaggctgtccacacgttggtgcaaagggatgacatagagctgacccccaccctgctg
gggctactgggacctcctagcggcatgcagcgttcagtaagcagccgccgggcccggcct
tcggcctttgcatttcccggtccagatatggaggtgacggagctgcagccgcttcggtgc
tccaagaccagagaggaagcaaagacagagctttcccagccaggcatcgctgctttggcc
ttgaagggtctcgtgctcaggtccgacctggctgtcagcggcactgggacccagggctgc
cccgccatcccaccgccaggagcggaggagctgtctccagcagcagctgctgcacagagc
cccagagctgtaacactcactgtgaaggtccaggacttcattcttgcggtcagcgagacc
acgaacccactggaaagaaccaactcccgacacggaaaggctgcaagagccgagctgagt
gggggtgctgcccagaatcctgtgggcaaaagactacagcaggagctgatgaccctcatg
atatctggtgacaaagggatttctgctttccttgaatcagacaaccttttcaaatgggta
gggaccatccatggagcagctggcacagtgtatgaagacctgaggtataagctcttgcta
gagttccccagtggctacccttacaatgagcccacagtgaagttcctcacatcctgctac
caccccaacatagacacccagggtaacatatgcctggatatctggaaagacaagtcgtct
gtactgtatggcatcaggaccattctggtctccatccagagcctgctaggagaacccaac
attgatagccctttgaacatgcatgctgttgagttctggaaaaaccctacagcttttacc
ttcaagaaacctattcaaagcaggcttcttcctcagaccagctctcccagcagcaagctg
atcatcaataactccaaggtgcactacggccatccttcaaggcaggatcaaattcctcgt
ggactttcccagcgtccagaccccaagcctgggctctggcagctggctcctttcttgcag
gtctcttggaatcgcttcgcgcttgccggcctggttgtggactga

>gi568815583f:31227213_31472296|GENSCAN_predicted_peptide_5|633_aa
MAVAAAITLAAEGRWLGLHTPWSWWEPCVSELGQKLPESRCGRPTHSCRPRPPVLRRRQE
PRPPGQGYSRPNCSCASKPPCALGGGQEQMQDENSDKDAMEVSRKKINTNQLPKDPETKD
PNVLATPVPSGPISIVSMCLEVPQIGDISEPVPGVWCLGARILICPCAFEGSVDGVISTL
SFGAEEKTSSAPSYSWHACCYSGPPCSRCFVAKAPTALGVPSPIRLKGKQERSVMEEGAE
GPGQNLAVNWNAALMSLSKGFKLHLESLPTKAKGEKMASPGVAQLQAEILADPFCNQKAP
CGGLPFVLGHLHLYLQLPVPLRQAGQTLQPEEQGAVDGDNCSRSMSGKQLHSSACRRSSH
IPLYLESQLEVHSIFPGEAEQLNLKGIVENNTTISQQLLELKAGVVRERDSQRGTAKTTA
ITVTVEPKLPEEAIANVQHQGRRRARGGRGLGWRPAQALDCSRMGKAKVPTSKRAPSSPV
AKPGPVKTLTWKKNKKKKRFWKSKAQEVSKKPGSGPGAVVRPPKAPEDFSQNWKVLQEWL
LKQKSQAPEKPFVISQMGSKKKPKIIQQNKKEISPQVKGEEMLAGKDQEASRGSVPSGSK
MDRKAPVPRTKAGGAEHNKKGTKERTNGDIVPE

>gi568815583f:31227213_31472296|GENSCAN_predicted_CDS_5|1902_bp
atggcagtggctgctgccatcacactggctgcagaagggaggtggctggggctgcacact
ccatggagctggtgggagccctgcgtttctgagttggggcagaagctccctgaaagtcgc
tgtggccgcccaacccacagctgcagacccaggcctcctgtgcttcgaagaaggcaggag
ccccgccctcctggacaaggctacagccgtccaaactgtagctgtgcttccaagcctccc
tgtgctcttggaggggggcaggagcagatgcaggatgagaactcggacaaagacgccatg
gaggtttccaggaagaaaatcaacaccaatcaactccccaaagatcccgaaacaaaggat
cctaatgtacttgctactcccgtcccatcaggaccaatcagcatagtgtcaatgtgtctt
gaagtcccccagatcggtgacatctcagagccagtgccaggtgtttggtgtctgggtgcc
aggatcttgatttgcccctgtgcctttgaaggctcagtcgatggtgtgattagcaccctt
tcctttggtgcagaagagaagacttcctctgcgcccagttattcctggcacgcatgttgc
tattctggtccgccgtgtagcaggtgctttgtggccaaggcacccactgctttaggggtg
ccaagccccatcaggctgaagggcaaacaggaaaggtcagtgatggaggagggggcagag
ggccctgggcagaacctggctgtgaactggaatgctgcgctcatgtcgctatccaaaggc
tttaagttgcacctggaatctctgcccacaaaagctaagggggagaaaatggccagtcca
ggtgtcgcacagctgcaggcagagatcctggcggaccccttctgtaaccagaaggcaccc
tgtggggggctcccttttgtcttggggcacctccacctctacttacagctgcctgtgccc
ctgcggcaggcagggcagaccctccagcctgaggagcaaggtgcagtggatggggacaac
tgttccagaagtatgagtgggaagcagctgcattcatctgcatgtaggagaagcagccac
attcccctgtacctggagtctcagctggaggtccacagtatcttcccaggagaggcagag
caattgaatctcaagggcattgttgagaacaacaccacaatcagccagcaattactggag
cttaaagctggtgtggtcagggaaagagacagtcaaagagggactgccaaaaccactgcc
atcactgtgactgtggagccaaagctgcctgaagaagcaatagcaaatgttcaacaccag
gggaggcgccgggcccggggaggccggggtctcgggtggcggccggcccaggcgctggac
tgcagcaggatggggaaggcgaaggtccccacctccaagcgcgccccgagcagccccgtg
gctaagccgggtcctgtcaagacgctcacttggaagaaaaacaagaagaaaaaaaggttt
tggaaaagcaaggcgcaggaagtaagcaagaagccaggaagcggccctggtgctgtggtg
cgacctccaaaggcaccagaagacttttctcaaaactggaaggtgctgcaagagtggctg
ctgaaacaaaaatctcaggccccagaaaagccttttgtcatctctcagatgggttccaaa
aagaagcccaaaattatccagcaaaacaaaaaagagatctcgcctcaagtgaagggagag
gaaatgctggcgggaaaagaccaagaggccagcaggggctctgttccttcaggctccaag
atggacaggaaggcgccagtacctcgcaccaaggccggcggagcagagcacaataagaaa
ggaaccaaggaaaggacaaatggtgatattgttccagaatga