GENSCAN 1.0	Date run:  5-Nov-116	Time: 09:47:45

Sequence gi568815582f:14611689_14750812 : 139124 bp : 46.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   3863   3858    6                               1.05
 1.05 Term -  12265  12261    5  2  2  136   49     0 0.171  -2.03
 1.04 Intr -  18031  17909  123  2  0  104   68   154 0.480  15.56
 1.03 Intr -  18238  18112  127  1  1   23   12    91 0.246  -4.75
 1.02 Intr -  18647  18468  180  2  0   63   39   105 0.176   3.16
 1.01 Init -  18851  18804   48  2  0   84   58    14 0.413  -1.04
 1.00 Prom -  23730  23691   40                              -2.66

 2.00 Prom +  28559  28598   40                              -5.56
 2.01 Init +  32659  32921  263  0  2   68   95    65 0.350   1.74
 2.02 Intr +  36700  36904  205  1  1  114   92    59 0.997   8.10
 2.03 Intr +  38116  38285  170  0  2  101  100   130 0.984  14.24
 2.04 Intr +  43378  43522  145  1  1   93   61   129 0.998  10.98
 2.05 Intr +  50204  50377  174  1  0  112   82   191 0.998  21.04
 2.06 Intr +  53181  53383  203  2  2   74  100    99 0.907   7.78
 2.07 Term +  55947  56139  193  0  1  116   42    52 0.469   0.29
 2.08 PlyA +  57174  57179    6                               1.05

 3.05 PlyA -  57246  57241    6                               1.05
 3.04 Term -  61061  60919  143  0  2  107   42   131 0.961   8.49
 3.03 Intr -  76583  76477  107  1  2   93  101   162 0.981  17.86
 3.02 Intr -  78957  78807  151  1  1   99  105   103 0.905  12.32
 3.01 Init -  82541  82445   97  2  1   51   96   243 0.569  19.87
 3.00 Prom -  84947  84908   40                              -7.16

 4.02 PlyA -  86899  86894    6                               1.05
 4.01 Sngl -  91869  91309  561  0  0   84   40   351 0.273  26.04
 4.00 Prom -  94232  94193   40                              -4.16

 5.00 Prom +  94745  94784   40                              -5.46
 5.01 Init +  97256  97375  120  1  0   39  113   143 0.936  11.19
 5.02 Intr + 104380 104508  129  0  0   82   56    48 0.765   1.89
 5.03 Intr + 108139 108238  100  0  1   95   86    37 0.977   3.88
 5.04 Intr + 108402 108546  145  1  1   49   61   140 0.918   6.74
 5.05 Intr + 111504 111611  108  0  0  100   84    84 0.401   8.60
 5.06 Intr + 112800 112835   36  0  0   88  114     7 0.200   0.68
 5.07 Term + 114195 114270   76  0  1   88   42    45 0.169  -2.79
 5.08 PlyA + 114611 114616    6                               1.05

 6.05 PlyA - 115038 115033    6                               1.05
 6.04 Term - 115402 115398    5  2  2   65   40     0 0.346 -10.03
 6.03 Intr - 115700 115594  107  1  2   93  101   162 0.961  17.86
 6.02 Intr - 118074 117924  151  1  1   99  105   103 0.905  12.32
 6.01 Init - 121659 121563   97  0  1   51   96   243 0.569  19.87
 6.00 Prom - 124065 124026   40                              -7.16

 7.02 PlyA - 126017 126012    6                               1.05
 7.01 Sngl - 130991 130431  561  2  0   84   40   351 0.239  26.04
 7.00 Prom - 133354 133315   40                              -4.16

 8.00 Prom + 133867 133906   40                              -5.46
 8.01 Init + 136378 136497  120  0  0   39  113   143 0.222  11.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_1|160_aa
MGQGARLPVHHCISTPEGKEPSLGPAPAAAQALTQAQQARAVSGSRGRRHRCGCLSYCRS
RRGIRRVEPLRRARAREPCTYSSNPGTIRGLVLLRAGHPPGLVPPDPCTPRGLDSPRPGI
QATGSEPLFGFSADFKSNLHKVYQAIEEADFFAIDGEFSG

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_1|483_bp
atggggcagggagcacgtcttcctgttcatcactgtatctccacccctgagggaaaggag
cccagccttggccccgcccccgccgccgcgcaggcgctgacgcaagcgcagcaggcgcgc
gctgtttccggaagtcgcggccggcgtcaccgctgcggctgcctcagctactgccgcagt
cgccgcggaattcggcgagtagaaccgctgaggcgggcgcgggcccgggagccttgtact
tactcctccaaccccggcaccatccggggccttgtccttctccgggccgggcaccccccg
gggcttgtcccccctgacccatgcacccctcgaggacttgattcccctcgccccggaatt
caggccactggttctgagcctcttttcggtttctccgcagattttaagagtaatcttcac
aaagtgtaccaggccatagaggaggccgacttcttcgccatcgatggggagttttcaggc
tga

>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_2|450_aa
MEEPQKSYVNTMDLERDEPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLAL
WWASSKKTECPECREKWEGFPKVSILLRDAIEKLFPDAIRLRFEDIQQNNDIVQSLAAFQ
KYGNDQIPLAPNTGRANQQMGGGFFSGVLTALTGVAVVLLVYHWSSRESEHDLLVHKAVA
KWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAIL
MELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTFLPFIH
TICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSR
FLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQGLFVAMFWPLIPQFVCN
CLFYWALYFNPIINIDLVVKELRRLETQVL

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_2|1353_bp
atggaggaacctcagaaaagctatgtgaacacaatggaccttgagagagatgaacctctc
aaaagcaccggccctcagatttctgttagtgaattttcttgccactgctgctacgacatc
ctggttaaccccaccaccttgaactgtgggcacagcttctgccgtcactgccttgcttta
tggtgggcatcttcaaagaaaacagaatgtccagaatgcagagaaaaatgggaaggtttc
cccaaagtcagtattctcctcagggatgccattgaaaagttatttcctgatgccattaga
ctgagatttgaagacattcagcagaataatgacatagtccaaagtcttgcagcctttcag
aaatatgggaatgatcagattcctttagctcctaacacaggccgagcgaatcagcagatg
ggagggggattcttttccggtgtgctcacagctttaactggagtggcagtggtcctgctc
gtctatcactggagcagcagggaatctgaacacgacctcctggtccacaaggctgtggcc
aaatggacggcggaagaagttgtcctctggctggagcagctgggcccttgggcatctctt
tacagggaaaggtttttatctgaacgagtaaatggaaggttgcttttaactttgacagag
gaagaattttccaagacgccctataccatagaaaacagcagccacaggagagccatcctc
atggagctagaacgtgtcaaagcattaggcgtgaagcccccccagaatctctgggaatat
aaggctgtgaacccaggcaggtccctgttcctgctatacgccctcaagagctcccccagg
ctgagtctgctctacctgtacctgtttgactacaccgacaccttcctacctttcatccac
accatctgccctctgcaagaagacagctctggggaggacatcgtcaccaagcttctggat
cttaaggagcctacgtggaagcagtggagagagttcctggtcaaatactccttccttcca
taccagctgattgctgagtttgcttgggactggttggaggtccattactggacatcacgg
tttctcatcatcaatgctatgttactctcagttctggaattattctccttttggagaatc
tggtcgagaagtgaactgaagaccgtgcctcagaggatgtggagccatttctggaaagta
tcaacgcaggggctttttgtggccatgttctggcccctcatccctcagtttgtttgcaac
tgtttgttttactgggccctgtactttaacccaattattaacattgatcttgtggtcaag
gaactccggcggctggaaacccaggtgttgtga

>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_3|165_aa
MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI
AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGP
AENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_3|498_bp
atggggccgctacctgtgtgcctgccaatcatgctgctcctgctactgccgtcgctgctg
ctgctgctgcttctacctggccccgggtccggcgaggcctccaggatattacgtgtgcac
cggcgtgggatcctggaactggcaggaactgtgggttgtgttggtccccgaacccccatc
gcctatatgaaatatggttgcttttgtggcttgggaggccatggccagccccgcgatgcc
attgactggtgctgccatggccacgactgttgttacactcgagctgaggaggccggctgc
agccccaagacagagcgctactcctggcagtgcgtcaatcagagcgtcctgtgcggaccg
gcagagaacaaatgccaagaactgttgtgcaagtgtgaccaggagattgctaactgctta
gcccaaactgagtacaacttaaagtacctcttctacccccagttcctatgtgagccggac
tcgcccaagtgtgactga

>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_4|186_aa
MATCGELSVNCCAADFSEQRRRLERRRRQVEPGPRGPGMGQQPLQPGSPGRGAGRQRASR
QPPCGALTSLQAAPQQPPGSAHTSLQGSPLALHLPPPPRGVNCAVCRPGYADPGSPGPQQ
PDEEPRATARGYEKEQDGAPEKCKSSELGPPCQERLGAEDGEMEMEKRQVGRSGAPPVGS
ACAGGA

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_4|561_bp
atggcgacctgcggcgagctgagcgtcaactgctgcgccgccgacttctcggagcagcga
aggcgactcgagagaagacgccgccaagtggaacccgggccccgcggccctgggatgggg
cagcagccactgcagccaggaagccctgggcggggcgctgggcgccaacgagcgtcacgg
caacctccatgcggcgccctcaccagcctacaggcggcaccgcagcagcctccaggcagc
gcccacaccagcctacaggggtcgccgctcgcactgcacctgcctccgccgccccggggt
gtgaactgcgctgtctgtcggcctggctacgctgacccgggcagcccaggcccgcagcag
ccggacgaggagcccagggccactgcccggggttacgagaaggagcaggacggtgcccca
gaaaaatgcaagagctcagagctagggcccccgtgccaggaaaggctaggagcagaagat
ggagagatggagatggagaagcggcaggtgggaaggagcggcgctccaccggtggggtca
gcatgcgctggcggggcttag

>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_5|237_aa
MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI
VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
RQVSEAEENGKLDMKEIHTYISPLLQESLFATGSEWRQRSIVILQDCPTGPTSQLKL

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_5|714_bp
atggtgaagctctctattgtcctgaccccacggttcctgtcccatgaccagggccagctc
accaaggagctgcagcagcacgtaaagtcagtgacatgcccatgcgagtacctgaggaag
gttatcaatactctggctgaccatcgtcatcgtgggactgactttggtggaagtccttgg
ttacttatcattactgtgtttctgagaagttataaatttgccatctccctctgcacaagt
tacctttgtgtgtctttcctgaagactatcttcccgtctcaaaatggacatgatggatcc
acggatgtacagcagagagccaggaggtccaaccgccgtagacaggaaggaattaaaatt
gtcctggaagacatctttactttatggagacaggtggaaaccaaagttcgagctaaaatc
tgtaagatgaaggtgacaacaaaagtcaaccgtcatgacaaaatcaatggaaagaggaag
accgccaaagaacatctgaggaaactaagcatgaaagaacgtgagcacggagaaaaggag
aggcaggtgtcagaggcagaggaaaacgggaaattggatatgaaagaaatacacacctac
atatcaccccttctgcaagaaagcctctttgcaaccgggtcagaatggcggcagcggagc
atcgtcattcttcaggattgccctactggccctacctcacagctgaaactttaa

>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_6|119_aa
MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI
AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCG

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_6|360_bp
atggggccgctacctgtgtgcctgccaatcatgctgctcctgctactgccgtcgctgctg
ctgctgctgcttctacctggccccgggtccggcgaggcctccaggatattacgtgtgcac
cggcgtgggatcctggaactggcaggaactgtgggttgtgttggtccccgaacccccatc
gcctatatgaaatatggttgcttttgtggcttgggaggccatggccagccccgcgatgcc
attgactggtgctgccatggccacgactgttgttacactcgagctgaggaggccggctgc
agccccaagacagagcgctactcctggcagtgcgtcaatcagagcgtcctgtgcggctag

>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_7|186_aa
MATCGELSVNCCAADFSEQRRRLERRRRQVEPGPRGPGMGQQPLQPGSPGRGAGRQRASR
QPPCGALTSLQAAPQQPPGSAHTSLQGSPLALHLPPPPRGVNCAVCRPGYADPGSPGPQQ
PDEEPRATARGYEKEQDGAPEKCKSSELGPPCQERLGAEDGEMEMEKRQVGRSGAPPVGS
ACAGGA

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_7|561_bp
atggcgacctgcggcgagctgagcgtcaactgctgcgccgccgacttctcggagcagcga
aggcgactcgagagaagacgccgccaagtggaacccgggccccgcggccctgggatgggg
cagcagccactgcagccaggaagccctgggcggggcgctgggcgccaacgagcgtcacgg
caacctccatgcggcgccctcaccagcctacaggcggcaccgcagcagcctccaggcagc
gcccacaccagcctacaggggtcgccgctcgcactgcacctgcctccgccgccccggggt
gtgaactgcgctgtctgtcggcctggctacgctgacccgggcagcccaggcccgcagcag
ccggacgaggagcccagggccactgcccggggttacgagaaggagcaggacggtgcccca
gaaaaatgcaagagctcagagctagggcccccgtgccaggaaaggctaggagcagaagat
ggagagatggagatggagaagcggcaggtgggaaggagcggcgctccaccggtggggtca
gcatgcgctggcggggcttag

>gi568815582f:14611689_14750812|GENSCAN_predicted_peptide_8|40_aa
MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRK

>gi568815582f:14611689_14750812|GENSCAN_predicted_CDS_8|120_bp
atggtgaagctctctattgtcctgaccccacggttcctgtcccatgaccagggccagctc
accaaggagctgcagcagcacgtaaagtcagtgacatgcccatgcgagtacctgaggaag