GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:56:14

Sequence gi568815581r:9798098_10005180 : 207083 bp : 47.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   2410   2405    6                               1.05
 1.05 Term -   4547   4289  259  1  1   82   42   162 0.648   6.02
 1.04 Intr -   9504   9393  112  1  1   72  111    47 0.917   4.84
 1.03 Intr -  10885  10733  153  2  0   81   80    91 0.954   7.64
 1.02 Intr -  12521  12474   48  0  0   87   94    21 0.508   1.25
 1.01 Init -  23974  23665  310  1  1   92  105   381 0.985  35.68
 1.00 Prom -  29100  29061   40                              -6.96

 2.00 Prom +  29506  29545   40                              -2.56
 2.01 Init +  29887  29919   33  0  0   55   96    29 0.304   0.34
 2.02 Intr +  35710  35797   88  0  1   85  107    30 0.769   4.14
 2.03 Intr +  44398  44519  122  2  2   82   92    89 0.737   8.91
 2.04 Intr +  45530  45712  183  1  0   97   37    59 0.500   1.68
 2.05 Intr +  56398  56504  107  0  2  101  109    66 0.273   9.01
 2.06 Intr +  59326  59479  154  1  1   60   74   202 0.899  16.07
 2.07 Intr +  61845  62004  160  2  1  138   84   166 0.990  20.76
 2.08 Intr +  65664  65859  196  1  1  110   75    41 0.612   3.47
 2.09 Intr +  72404  72649  246  2  0   90   44    97 0.072   2.07
 2.10 Intr +  82281  82419  139  0  1  102  103   129 0.999  16.27
 2.11 Intr +  89835  89876   42  2  0  101   64    83 0.979   5.64
 2.12 Term +  91273  91608  336  0  0  104   46   341 0.992  26.07
 2.13 PlyA +  92645  92650    6                               1.05

 3.05 PlyA -  93444  93439    6                               1.05
 3.04 Term - 100107  99998  110  1  2   50   44   134 0.945   3.87
 3.03 Intr - 100312 100286   27  2  0   97   90    27 0.759   1.89
 3.02 Intr - 103003 102892  112  1  1   86   23   161 0.960   9.35
 3.01 Init - 107083 106703  381  1  0   56   61   981 0.822  89.07
 3.00 Prom - 112129 112090   40                              -5.56

 4.12 PlyA - 112440 112435    6                               1.05
 4.11 Term - 119244 119131  114  0  0  117   37   213 0.984  17.67
 4.10 Intr - 120002 119904   99  2  0   87   75   183 0.891  17.21
 4.09 Intr - 121608 121529   80  1  2   75   99   131 0.912  12.17
 4.08 Intr - 127502 127379  124  2  1   64  119   219 0.953  22.76
 4.07 Intr - 128672 128544  129  2  0   84  100   355 0.956  37.19
 4.06 Intr - 136147 136069   79  0  1  111   86    63 0.987   7.95
 4.05 Intr - 142103 142029   75  1  0  116   96    86 0.997  10.83
 4.04 Intr - 145139 145024  116  2  2  117   67   175 0.998  17.55
 4.03 Intr - 148886 148797   90  2  0  113   94   144 0.828  17.69
 4.02 Intr - 161231 161105  127  1  1   78   98    97 0.563  10.38
 4.01 Init - 163771 163617  155  1  2   99   53    60 0.920   3.06
 4.00 Prom - 164146 164107   40                              -2.16

 5.07 PlyA - 164494 164489    6                               1.05
 5.06 Term - 167408 167340   69  2  0   97   54    21 0.495  -2.46
 5.05 Intr - 171665 171580   86  0  2   97  110    51 0.439   7.74
 5.04 Intr - 181366 181278   89  0  2  121   77    -9 0.297   0.91
 5.03 Intr - 188018 187952   67  0  1   90   72    74 0.719   3.96
 5.02 Intr - 189903 189825   79  0  1   33   52    99 0.615  -0.08
 5.01 Init - 190448 190401   48  2  0   84   66    70 0.688   5.35
 5.00 Prom - 194992 194953   40                              -2.46

 6.00 Prom + 195123 195162   40                             -10.84
 6.01 Sngl + 195299 196687 1389  1  0   35   48   461 0.702  32.88
 6.02 PlyA + 197122 197127    6                               1.05

 7.02 PlyA - 198038 198033    6                               1.05
 7.01 Term - 200367 200250  118  2  1  103   38   102 0.423   4.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  54763  54566  198  1  0  -57   41   300 0.805   8.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:9798098_10005180|GENSCAN_predicted_peptide_1|293_aa
MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQDQPGGQHCIHFKRDNS
SNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNGEDEKCRSFRSVVPAEEQG
VLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVDALVAIFMVLAGLLGMVAHMM
YTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCLAVSVSAMSRFTAARLEFTEKQQ
AQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFRNVSGHLPPGAPGKVSIC

>gi568815581r:9798098_10005180|GENSCAN_predicted_CDS_1|882_bp
atggacagggccaagcagcagcaggcgctgctcctcctccctgtctgcctcgccctcacc
ttctccctcaccgccgtggtcagcagccactggtgtgaggggacccgacgggtggtgaag
ccactgtgccaggaccagccgggagggcagcactgcattcacttcaaacgggacaacagc
agcaatggcaggatggacaacaatagccaggctgtcctgtacatttgggagctgggtgat
gacaagttcattcagcgggggttccatgtggggctctggcagtcctgcgaggagagcctc
aacggtgaagatgaaaagtgtaggagtttccggagtgtagtgccagctgaagaacaaggt
gttttgtggctgtccatcgggggcgaggtcctggatatcgttctgatactgacaagcgcc
atcctcctgggctccagagtgagttgtcgcagccctgggttccactggctcagggtggat
gccttggtagccatcttcatggtgctggcagggcttctaggcatggtggcccacatgatg
tacacaaccatttttcaaatcactgtgaaccttggaccagaagattggaagcctcagacc
tgggactatggctggtcatattgccttgcctggggttctttcgccctctgcctggctgtg
tcggtctcggccatgagcaggttcacggcagcccgcctggaattcaccgagaagcagcag
gcacagaacggcagtcggcactctcaacacagcttcctggaacccgaggcttcggagagc
atttggaaaacaggagctgctccttgccctgctgaacaagccttcaggaatgtttctgga
cacctcccaccaggcgccccaggcaaggtgtccatatgctag

>gi568815581r:9798098_10005180|GENSCAN_predicted_peptide_2|601_aa
MAVFLLRSMGRVTGSLLEETTRKWAQYKQACLRDLLKEPSESSGRAYRHCLAQGTWQTIE
NATDIWQDDSECSENHSFKQNNPSAPYFLVGLLLFSLRTSCLSNICSLSFKVQCKRLHKA
EEQVFGDQTDIYGHTLVSFIPMVDRYALLSTLQLMYTVGYSFSLISLFLALTLLLFLRKL
HCTRNYIHMNLFASFILRTLAVLVKDVVFYNSYSKRPDNENGWMSYLSEMSTSCRSVQVL
LHYFVGANYLWLLVEGLYLHTLLEPTVLPERRLWPRYLLLGWDPVQASAPALANTISSIS
LKPIFCHCKPHVLIILAASPSIWWVLDKHIQCTLMAYILDPERFLLTRLSVQMTFGTLEI
QMAFGTVEIQMAFRTVEITAKHLLPGQLTAELPLVYIELMELMAEPSLTLKFTAMWNSSL
TYPILLFFSRLAKSTLVLIPLLGVHEILFSFITDDQVEGFAKLIRLFIQLTLSSFHGFLV
ALQYGFANGEVKAELRKYWVRFLLARHSGCRACVLGKDFRFLGKCPKKLSEGDGAEKLRK
LQPSLNSGRLLHLAMRGLGELGAQPQQDHARWPRGSSLSECSEGDVTMANTMEEILEESE
I

>gi568815581r:9798098_10005180|GENSCAN_predicted_CDS_2|1806_bp
atggctgtcttcctccttcgttccatgggcagggttacaggatccctccttgaggaaacg
actcggaagtgggctcagtacaaacaggcatgtctgagagacttactcaaggaaccttct
gagagctcaggaagggcctacagacactgcttggctcaggggacttggcagacgatagag
aacgccacggatatttggcaggatgactccgaatgctccgagaaccacagcttcaagcaa
aacaatccttctgcaccatactttctcgttggactcttgctcttctccctgaggacctcc
tgtttgtccaacatctgctcactttccttcaaagtgcaatgcaagaggctgcacaaagcg
gaggaacaggtgtttggggatcagacagatatctacggccacaccttggtttctttcatt
ccgatggtggatcgttatgccttgctgtcaaccttgcagctgatgtacaccgtgggatac
tccttctctcttatctccctcttcctggctctcaccctcctcttgtttcttcgaaaactc
cactgcacgcgcaactacatccacatgaacttgtttgcttctttcatcctgagaaccctg
gctgtactggtgaaggacgtcgtcttctacaactcttactccaagaggcctgacaatgag
aatgggtggatgtcctacctgtcagagatgtccacctcctgccgctcagtccaggttctc
ttgcattactttgtgggtgccaattacttatggctgctggttgaaggcctctacctccac
acgctgctggagcccacagtgcttcctgagaggcggctgtggcccagatacctgctgttg
ggttgggatcctgtgcaggcttctgctccagccctagccaacaccatttcaagtatctct
ttaaaacccattttctgccactgtaagccccatgttctgatcatcctggcagccagccca
agcatatggtgggttcttgataaacatattcagtgcacactcatggcctacattctggac
cctgaaaggttcttgctaaccagactttcagttcagatgacctttgggactttggagatt
cagatggcctttgggacagtggagattcagatggcctttaggacagtggagatcacagct
aagcatttactacctggccagctaactgctgaattgcccctggtttacattgaactgatg
gaactgatggccgagcccagcctgaccttgaagttcacagctatgtggaattcgtcactt
acttacccaattctgctctttttttcaagattggcaaaatcaacactggtcctcattcct
ttattgggcgttcatgagatcctcttctctttcatcactgatgatcaagttgaaggattt
gcaaaacttatacgacttttcattcagttgacactgagctcctttcatgggttcctggtg
gccttgcagtatggttttgccaatggagaggtgaaggctgagctgcggaaatactgggtc
cgcttcttgctagcccgccactcaggctgcagagcctgtgtcctggggaaggacttccgg
ttcctaggaaaatgtcccaagaagctctcggaaggagatggcgctgagaagcttcggaag
ctgcagccctcacttaacagtgggcggctcctacatctagccatgcgaggtcttggggag
ctgggcgcccagccccaacaggaccatgcacgctggccccggggcagcagcctgtccgag
tgcagtgagggggatgtcaccatggccaacaccatggaggagattctggaagagagtgag
atctag

>gi568815581r:9798098_10005180|GENSCAN_predicted_peptide_3|209_aa
MGNSKSGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT
DPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKN
EVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDGSSKGHGKGDKLTEKE
FIEGTLANKEILRLIQFEPQKVKEKMKNA

>gi568815581r:9798098_10005180|GENSCAN_predicted_CDS_3|630_bp
atggggaacagcaaaagtggggccctgtccaaggagatcctggaggagctgcagctgaac
accaagttctcggaggaggagctgtgctcctggtaccagtccttcctgaaggactgtccc
accggccgcatcacccagcagcagttccagagcatctacgccaagttcttccccgacacc
gaccccaaggcctacgcccagcatgtgttccgcagcttcgattccaacctcgacggcacc
ctggacttcaaggagtacgtcatcgccctgcacatgaccaccgcgggcaagaccaaccag
aagctggagtgggccttctccctctacgacgtggacggtaacgggaccatcagcaagaat
gaagtgctggagatcgtcatggctattttcaaaatgatcactcccgaggacgtgaagctc
cttccagacgatgaaaacacgccggaaaagcgagccgagaagatctggaagtactttgga
aagaatgatgatgggagctccaagggtcatgggaaaggagataaacttacagagaaagaa
ttcattgaggggacactggccaataaggaaattctgcgactgatccagtttgagcctcaa
aaagtgaaggaaaagatgaagaacgcctga

>gi568815581r:9798098_10005180|GENSCAN_predicted_peptide_4|395_aa
MAEDRGKSYAGLDSNFHSSVYYSLVTLDSFTSASPNFMICKMELMPFNLLGLEPEWGEKM
SNMENSFDDVSCLSPQNLGSSSPSKKQSKENTITINCVTFPHPDTMPEQQLLKPTEWSYC
DYFWADKKDPQGNGTVAGFELLLQKQLKGKQMQKEMSEFIRERIKIEEDYAKNLAKLSQN
SLASQEEGSLGEAWAQVKKSLADEAEVHLKFSAKLHSEVEKPLMNFRENFKKDMKKCDHH
IADLRKQLASRYASVEKARKALTERQRDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGD
DLMRCVDLYNQAQSKWFEEMVTTTLELERLEVERVEMIRQHLCQYTQLRHETDMFNQSTV
EPVDQLLRKVDPAKDRELWVREHKTGNIRPVDMEI

>gi568815581r:9798098_10005180|GENSCAN_predicted_CDS_4|1188_bp
atggcggaagatagaggaaagagttatgcaggcttggattctaatttccactcctctgtt
tactatagccttgtgaccctggacagttttacttctgcaagccccaatttcatgatctgc
aaaatggagttgatgccatttaacttgctggggttggaacctgaatggggggaaaaaatg
tccaatatggagaacagctttgacgatgtttcttgcctctctccccagaacctgggatcc
tcatcgccaagcaaaaagcagagcaaggaaaacaccatcacaataaactgtgtgacgttc
cctcacccagacacgatgccggaacagcagctgctgaaaccaaccgagtggagctactgc
gactacttctgggctgataagaaggacccccaaggcaacggcaccgtggctgggtttgaa
ctactgctccagaaacagctgaagggcaaacaaatgcagaaggaaatgtcagaattcatc
cgggaaaggataaagattgaagaagactatgcgaagaacttagctaagctctctcagaac
tccttggcttcacaggaggaaggctccttgggagaggcgtgggcccaggtgaagaagagc
ctggcggacgaagcagaagttcacctcaagttctctgccaagcttcacagcgaggtggag
aagcccctgatgaacttccgtgagaacttcaagaaagacatgaagaagtgcgaccaccac
attgccgaccttcgcaagcagctcgccagccgctatgcctcggtggagaaggcccggaaa
gccctcacagagcggcagagagacctggagatgaagacccagcagctggagatcaagctg
agcaacaagacagaggaggacatcaagaaggcgcggagaaagtccacacaggctggagac
gacctcatgcgctgtgtggatctctacaaccaggcccagtccaaatggtttgaagagatg
gtgaccaccacattggagctagagcggctggaggtggagagggtagagatgatccggcag
cacctgtgccagtacacgcagctgcggcatgaaacagacatgttcaaccaaagcacagtc
gagcccgtggatcagctgcttcgaaaagtggacccggccaaagacagggagctgtgggtc
agagagcacaagacgggcaacatccgccctgtggacatggagatctag

>gi568815581r:9798098_10005180|GENSCAN_predicted_peptide_5|145_aa
MAVLEGIEKPEMEETLGAAESRHKPRKVDEPQQEATGGQRLVGQVPYLRGRTSRGFDPQG
DKVSRCIKSLSLSSAALCAGPLKGAEKGGEMGGEVNGYHASGTPAHPPETAHMSVRKSTG
DSQVLVCDVPPPVSIWSHCSSPTYE

>gi568815581r:9798098_10005180|GENSCAN_predicted_CDS_5|438_bp
atggctgtactggaaggcattgaaaaaccagagatggaggaaactctgggggcagcagag
agccggcacaagccaagaaaagtggacgagccccagcaggaggccactgggggccagagg
cttgtaggccaggtgccgtatttgagagggcgaaccagccgtggcttcgaccctcaagga
gataaggtgtcaaggtgcatcaagagcctctctctgtccagcgctgcactgtgtgctggg
cccctaaagggggctgagaaaggtggggagatgggtggagaagtgaatggataccacgca
tcagggaccccagcgcaccctccagagactgcccacatgagtgtccgaaaatccaccggt
gattcccaggtcctggtgtgtgatgttcccccaccggtgtccatatggtcccattgttca
tctcccacttatgagtga

>gi568815581r:9798098_10005180|GENSCAN_predicted_peptide_6|462_aa
MSSFEKCLFMSFAHFLMDAEKAFDKIQQPFMLETLNKLGIDGTYFKIIRAIYDKPTANIM
LNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFAD
DMIVYLENPIVSAQNLLRLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMNELPLTIA
SKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVI
YRFNAIPIKLPMPFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLPDFKLYYKAT
VTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKHWGKDSLFNKWCWENWLA
ICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFRSKTPKAM
ATKAKIDKWDLIKLKSFCTAKDYHQSEQATYKMGENFHNLLT

>gi568815581r:9798098_10005180|GENSCAN_predicted_CDS_6|1389_bp
atgtcttcttttgagaagtgtctgttcatgtcctttgcccactttttgatggatgcagaa
aaggcctttgacaaaattcaacaacccttcatgctagaaaccctcaataaattaggtatt
gatgggacgtatttcaaaataataagagctatctatgacaaacccacagccaatatcatg
ctgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccct
ctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggag
aaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagac
gacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaggctgata
agcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattctta
tacaccaataacagacaaacagagagccaaattatgaatgaactcccactcacaattgct
tcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacatt
ccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatt
tacagattcaatgccatccccatcaagctaccaatgcctttcttcacagaattggaaaaa
actactttaaagttcatatggaaccaaaaaagagcccacatcgccaagtcaatcctaagc
caaaagaacaaagctggaggcatcacgctacctgacttcaaactatactataaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaaca
gagccctcagaaataacgccgcatatctacaactacctgatctttgacaaacctgagaaa
aacaagcattggggaaaggattccctatttaataaatggtgctgggaaaactggctagcc
atatgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaaga
tggattaaagacttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggc
attaccattcaggacataggcatgggcaaggacttcaggtctaaaacaccaaaagcaatg
gcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagca
aaagactaccatcagagtgaacaggcaacctacaaaatgggagaaaattttcacaaccta
ctcacctga

>gi568815581r:9798098_10005180|GENSCAN_predicted_peptide_7|39_aa
XLAFSSSAAIWQKWPLIVEEDHPKSCSIQLLAGPVAVAK

>gi568815581r:9798098_10005180|GENSCAN_predicted_CDS_7|120_bp
nntcttgccttttcttcttcagcagccatttggcagaagtggccactcatcgtggaagag
gaccaccccaagtcctgttctatacaactcttggcaggtccagtagcagtagccaagtag