GENSCAN 1.0	Date run:  7-Nov-116	Time: 15:30:54

Sequence gi568815581f:57987091_58189276 : 202186 bp : 43.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   1020   1694  675  2  0   86   46   240 0.226  13.85
 1.02 PlyA +   1931   1936    6                               1.05

 2.00 Prom +  14652  14691   40                              -0.96
 2.01 Sngl +  18285  18488  204  2  0   79   40   320 0.978  21.49
 2.02 PlyA +  18578  18583    6                              -3.74

 3.04 PlyA -  18616  18611    6                              -5.80
 3.03 Term -  18883  18657  227  2  2   26   42   132 0.234  -0.66
 3.02 Intr -  19437  19253  185  2  2   86  105   188 0.710  19.73
 3.01 Init -  20047  19854  194  1  2   92   77   408 0.975  38.54
 3.00 Prom -  51082  51043   40                              -0.56

 4.08 PlyA -  56349  56344    6                               1.05
 4.07 Term -  60898  60788  111  1  0  108   50    59 0.749   2.66
 4.06 Intr -  66295  66119  177  1  0   22   81    95 0.368   2.32
 4.05 Intr -  70674  70590   85  2  1   57   70    28 0.075  -2.28
 4.04 Intr -  72468  72370   99  2  0  119   99    14 0.409   4.83
 4.03 Intr -  73714  73533  182  1  2  113   81    39 0.420   4.37
 4.02 Intr -  80797  80678  120  1  0  128   90     6 0.729   5.49
 4.01 Init -  81387  81337   51  0  0   65   52    30 0.283  -2.58
 4.00 Prom -  82886  82847   40                              -5.26

 5.00 Prom +  89434  89473   40                              -2.36
 5.01 Init +  91907  92028  122  1  2   54   93    40 0.204   0.76
 5.02 Intr +  93964  94050   87  1  0  103   52    43 0.202   1.29
 5.03 Intr +  96566  96600   35  2  2  110   64    67 0.252   4.37
 5.04 Intr +  96795  97226  432  1  0   70   28   247 0.504  10.52
 5.05 Intr +  97582  97664   83  2  2   31   99    48 0.855  -0.44
 5.06 Intr +  99992 100132  141  1  0   81   75   278 0.991  26.35
 5.07 Term + 102052 102189  138  0  0  121   43    78 0.885   4.56
 5.08 PlyA + 102492 102497    6                               1.05

 6.03 PlyA - 103778 103773    6                               1.05
 6.02 Term - 130685 130293  393  2  0  -20   38   801 0.919  59.33
 6.01 Init - 136029 135970   60  0  0   60   90    67 0.777   3.35
 6.00 Prom - 139199 139160   40                              -5.76

 7.00 Prom + 141855 141894   40                              -1.36
 7.01 Sngl + 144418 144864  447  0  0   82   39   256 0.979  16.33
 7.02 PlyA + 144886 144891    6                               1.05

 8.00 Prom + 145647 145686   40                              -2.46
 8.01 Init + 165102 165150   49  2  1   86   58    59 0.304   1.81
 8.02 Intr + 168110 168978  869  0  2   51  -10   683 0.283  45.86
 8.03 Intr + 169954 170294  341  0  2  -42   68   489 0.287  28.17
 8.04 Term + 170321 170714  394  2  1  -41   49   275 0.860   5.21
 8.05 PlyA + 170986 170991    6                               1.05

 9.00 Prom + 177410 177449   40                              -4.06
 9.01 Sngl + 182566 183489  924  0  0   83   54   876 0.764  80.09
 9.02 PlyA + 184039 184044    6                               1.05

10.03 PlyA - 184124 184119    6                               1.05
10.02 Term - 198541 198435  107  2  2   69   53   123 0.926   5.47
10.01 Intr - 199982 199939   44  1  2  110   94    26 0.885   3.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_1|224_aa
MAAAADPPPPHSPRSGSLLSRRRRQQSGGGGGGNGSGGSSTWQRRARPLPVTSGTHHRGG
ERGRGGSPGPAAAAPSRPDPLWASPLPARRLGAQPVPAGGGVRAPAGGLGWGPGRGWGAA
SPPAGVCGAAVRGSGSWSRGSSGEKMEDARVWRWPAGHSWAVSRDSDTVSSTVASLLDPQ
RRAQATADTRLFSRSCTAWSPPPNWGKPFRLRASLPFGISSPAG

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_1|675_bp
atggctgcggcggccgacccccctcctccccactccccccgctcggggagcctcctcagc
cggaggaggcgacaacaaagcggcggcggcggcggcggcaacggcagcggcggctcctca
acatggcagcgccgagcgcggccacttccggtaacctccgggacgcaccaccgcggcggc
gagcgcgggcggggggggagccccggcccggccgccgccgcccccagtcgcccggacccc
ctctgggcgtccccgctgccggctcgccgcctcggagctcagccagtgcccgctggcggt
ggggtcagggcccccgcgggggggctggggtggggcccggggcggggatggggcgcggcg
tccccccccgcgggggtgtgtggtgctgcggtccgtggctcaggcagctggagcaggggg
agctcaggagagaagatggaggacgccagggtctggcgctggcccgctgggcacagctgg
gccgtctcccgtgactcagacacggtgtccagcaccgtcgcgtccctgttagaccctcag
cggagggcacaggccacggcggacactcggctcttcagtcgctcatgcacagcatggtcc
ccacctccaaactgggggaagccctttcgacttcgagcctctcttccttttggcatttcc
tccccggccggctaa

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_2|67_aa
MGSTKSVTNHLMYESEICYDGENSVVILCFSLGSNCDSCCCFCYGFCYDYGFEIEIFHNL
DFWAHQL

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_2|204_bp
atgggttctacaaaaagtgtcaccaatcatcttatgtacgagagcgagatctgctatgac
ggggagaatagcgtggtgatcctctgcttctccttggggagtaactgcgactcctgctgt
tgcttctgctacggcttctgctacgactacggcttcgagatcgagatcttccataacttg
gacttctgggcccatcaactttaa

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_3|201_aa
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEVGYTRILFFDQNWIQWS

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_3|606_bp
atgtcgggaggtggtgtgattcgtggccccgcagggaacaacgattgccgcatctacgtg
ggtaacttacctccagacatccgaaccaaggacattgaggacgtgttctacaaatacggc
gctatccgcgacatcgacctcaagaatcgccgcgggggaccgcccttcgccttcgttgag
ttcgaggacccgcgagacgcggaagacgcggtgtatggtcgcgacggctatgattacgat
gggtaccgtctgcgggtggagtttcctcgaagcggccgtggaacaggccgaggcggcggc
gggggtggaggtggcggagctccccgaggtcgctatggccccccatccaggcggtctgaa
aacagagtggttgtctctggactgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gagtttgtacggaaagaagatatgacctatgcagttcgaaaactggataacactaagttt
agatctcatgaggtaggttatacacgtattcttttctttgaccagaattggatacagtgg
tcttaa

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_4|274_aa
MLFTVPGTLLPLFACLKEGQTALALLPGKHPGVYPTFSARAILRILAGDEHLKSGVECTV
ALFSCQLGSSSLLLLSTPPREKGEESALIAWRTVQQIHVRASLGMSPKLPRLLVRRKRSL
SPRCETDPKTPCNFLLKISTKKHSHSHSSSWSSRTSGKEHLPTWIWQPKPSKPPEHHVQY
ADGNDPVEMENLMLQMREWIIAGVMLFNKQEKKGSSVREEGLASDRHMDDSFIMRGGKQN
EDQMFSGVAPSSSFIRSTNMHHAIMLYCSGQSFC

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_4|825_bp
atgctgttcactgtgcctggaacactcttgcccctcttcgcctgcttaaaggaaggacaa
acagcactggctctcctcccaggaaagcaccctggcgtttaccccacattttcagcaaga
gccatattgaggattcttgctggagatgagcatcttaagagtggggtggagtgcacagtc
gctctgttctcctgccaacttggcagctcatcgctgctgttactatcaacacctccaagg
gaaaagggagaggagtcagctctgatcgcctggcgcactgtgcagcaaattcatgtcaga
gccagccttggaatgtctcccaagctcccaaggctcctggtgaggaggaaaaggagcctt
tctcccagatgtgaaactgatcctaagaccccctgtaatttcctgctgaaaatctccacc
aagaaacacagccacagccacagttcttcctggagttcaagaacctcaggcaaagaacac
ctgcccacatggatctggcagcccaagccctctaagcccccagagcatcatgttcaatat
gctgatgggaatgatccagttgagatggaaaatttgatgctgcagatgagagagtggata
attgctggagtgatgctttttaacaagcaagagaagaagggatccagtgtgcgagaggag
gggctggcctcagacagacacatggacgattcattcatcatgagaggaggaaagcaaaat
gaggaccagatgttctctggtgttgctcccagctcttcattcattcgctccacaaatatg
caccatgctatcatgctctactgctctgggcagtcattctgctag

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_5|345_aa
MSYKVTQEISKELRWISAVLVTWDLRGETGTRVCIAMGVSRMQYSIMAKIVGSGNNLELN
PAADKLDNLGAQCGLASVKVSARAAPPFAPATLVALLEARAAELPLPPPPGVSLRCVEAP
DVRGRGRGGGEGSGVTRLLLPPPPPSGASFLQRGRPVTPALFQAGWGRAADRPGPADLAG
GAGGRSGGRRMLPRSPGAALRDRSALEDGIVEGYGPLGEPEEGSRSSFLESKVAFNYCNK
VAPLDFGNEAVEQCHTMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKK
EFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_5|1038_bp
atgtcttacaaggtcacccaagaaatcagcaaagaattgaggtggatttcagcagttcta
gtcacatgggacttgagaggggagactggcaccagggtctgcattgcaatgggagtgtca
aggatgcagtatagtataatggctaagattgtaggcagtggaaacaatctggagttgaat
cctgccgctgacaaactggataatcttggggcccagtgcggactcgcctccgtgaaggtg
agcgcccgggctgcgccaccctttgccccggccaccctcgtggcgctgctggaggcccgg
gctgcggagctgccgctgcccccgcccccgggagtctctctgcgctgcgtggaggcccct
gatgtcaggggccggggaagagggggtggagagggctcgggcgtgacgcggctcctcctg
ccgccaccgccaccctctggggcgtccttcctgcagcgaggacgcccagtcactccggcg
ctgttccaggccgggtgggggagggcggccgaccggccggggcctgcggacctggccggc
ggcgcgggcgggaggtcggggggaaggaggatgcttcctcgttccccaggtgctgccctt
cgggaccgcagcgctctggaggatgggatagtggagggatacggcccacttggagagccc
gaagagggaagtagaagctctttcctggagagtaaggtggcttttaattactgtaacaaa
gttgctcctttggactttgggaatgaggcagtggagcagtgtcacaccatgtctgaccgg
aaggcagtgatcaagaacgcagacatgtctgaggacatgcaacaggatgccgttgactgc
gccacgcaggccatggagaagtacaatatagagaaggacattgctgcctatatcaagaag
gaatttgacaagaaatataaccctacctggcattgtatcgtgggccgaaattttggcagc
tacgtcacacacgagacaaagcacttcatctatttttacttgggtcaagttgcaatcctc
ctcttcaagtcaggctag

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_6|150_aa
MKKSRMRWLTPVIPALWEAERPALNHYIHLLELNKCSYHHPHHHHHCNHHHHHHHHCHIT
ITTIIITITVTVTITVITIIIAVTITIITITITSITIIGSITIITIITVTITIITITDTI
TITIITIIITITITITIIIIAITCFRPIDL

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_6|453_bp
atgaagaagagccggatgcggtggctcacgcctgtaatcccagcactttgggaggccgag
agaccggctctgaaccattacatccatctgctggagctcaacaaatgtagttaccatcat
cctcaccatcatcatcactgtaaccatcaccatcatcatcaccatcactgtcacatcacc
atcaccaccatcatcatcaccatcactgtcactgtcaccatcaccgtcatcactatcatc
atcgccgtcactatcaccatcatcaccatcactatcaccagcatcaccatcatcggcagc
atcaccatcatcaccatcatcactgtcaccatcaccatcatcaccatcactgacaccatc
actatcaccattatcaccatcattatcaccatcaccatcactatcaccatcatcatcatt
gccattacttgctttaggcccattgatctctga

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_7|148_aa
MKDLFKEKYKPLLNEIKEDTNKWKNIPCSWAGRINIMKMAILPKVIYTFSAIPIKLPTTF
FIELEKTTLKFIWNQKRARIAKPILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDI
DQWNRTEPSEIMPPIYNHLTFDKPDKKK

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_7|447_bp
atgaaggacctcttcaaggagaagtacaaaccactgctcaatgaaataaaagaggataca
aacaaatggaagaacattccatgctcatgggcaggaagaatcaatatcatgaaaatggcc
atactgcccaaggtaatttatacattcagtgccatccccatcaagctaccaacgactttc
ttcatagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatt
gccaagccaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaa
ctatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatata
gaccaatggaacagaacagagccctcagaaataatgccacctatctacaaccatctgacc
tttgacaaacctgacaaaaagaagtaa

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_8|550_aa
MGFHHVGQAALELLTSGFSQTQELQKFLFLLFLLVYVTTIVGNLLIMVTVTFDCRLHTPM
YFLLRNLALIDLCYSTVTSPKMLVDFLHETKTISYQGCMAQIFFFHLLGGGTVFFLSVMA
YDRYIAISQPLRYVTIMNTQLCVGLVVAAWVGGFVHSIVQLALILPLPFCGPNILDNFYC
DVPQVLRLACTDTSLLEFLMISNSGLLVIIWFLLLLISYTVILVMLRSHSGKARRKAAST
CTTHIIVVSMIFIPCIYIYTWPFTPFLMDKAVSISYTVMTPMLNPMIYTLRNQDMKAAMR
RLGKCLKGPAVAVGPGPGPGDAEAAAEERRVKVSSLPYSVDALVSDKKPPKEASPVPAKS
ASSGATLRLLLLPGHGAREAHSPGPLIKPFETASVKWENSLRRSGVDAGTLLIIRRRQDT
KHKTNPKPRTAFTTSQLLALEGKLLQKQYLSIAEGADFSSSPNLTETQVKILFQNRRAKT
KRLQESELEKLKMAAKPMLPSSFSLPFPISSPLQAASIYAASYPFHRPVLPIPPVGLYAT
PVGYGMYHLS

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_8|1653_bp
atggggtttcaccacgttggccaggctgctctcgaactcctgacctcagggttttcacag
acccaagagctccagaaattcctgttccttctgttcctgttagtctatgttaccaccatt
gtgggaaacctccttatcatggtcacagtgacttttgactgccggctccacacacccatg
tattttctgctccgaaatctagctctcatagacctctgctattccacagtcacctctcca
aagatgctggtggacttcctccatgagaccaagacgatctcctaccagggctgcatggcc
cagatcttcttcttccaccttttgggaggtgggactgtcttttttctctcagtcatggcc
tatgaccgctacatagccatctcccagcccctccggtatgtcaccatcatgaacactcaa
ttgtgtgtgggcctggtagtagccgcctgggtggggggctttgtccactccattgtccaa
ctggctctgatacttccactgcccttctgtggccccaatatcctagataacttctactgt
gatgttccccaagtactgagacttgcctgcactgatacctccctcctggagttcctcatg
atctccaacagtgggctgctagttatcatctggttcctcctccttctgatctcttatact
gtcatcctggtgatgctgaggtcccactcgggaaaggcaaggaggaaggcagcttccacc
tgcaccacccacatcatcgtggtgtccatgatcttcattccctgtatctatatctatacc
tggcccttcaccccattcctcatggacaaggctgtgtccatcagctacacagtcatgacc
cccatgctcaaccccatgatctacaccctgagaaaccaggacatgaaagcagccatgagg
agattaggcaagtgcctaaaggggccagcggtggcggtcgggccaggtccggggcctggg
gacgccgaggcggccgcggaggagcgccgcgtcaaggtctccagcctgccctacagtgtg
gatgcgctcgtgtcggacaagaagccgcccaaggaggcatccccagtgccggccaaaagc
gcctcttccggggccaccctgcggctactgctgctgccggggcacggcgctcgggaagcg
cacagccccgggccgctgatcaagcccttcgagaccgcctcggtcaagtgggaaaactcc
ctaagacggagcggcgtggatgcaggaaccctgctgataattcgccgccgccaagacaca
aaacacaagaccaatccgaagccgcgcacagcctttaccacgtcccagctcctcgctctg
gagggcaagttgctccagaaacagtacctctccattgcagagggtgcggacttctccagc
tctccgaacctcacggagactcaggtcaaaatcttgttccagaaccgaagggccaagacg
aaaagactgcaggagtcagaactggaaaagctgaaaatggctgcaaaacctatgctaccc
tccagcttcagtctccctttccccatcagctcgcccctgcaggcagcgtccatatacgca
gcatcctacccgttccatagacctgtgcttcccatcccgcccgtgggactctatgccacg
ccagtgggatatggcatgtaccacctgtcctaa

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_9|307_aa
METGNLTWVSDFVFLGLSQTRELQRFLFLMFLFVYITTVMGNILIIITVTSDSQLHTPMY
FLLRNLAVLDLCFSSVTAPKMLVDLLSEKKTISYQGCMGQIFFFHFLGGAMVFFLSVMAF
DRLIAISRPLRYVTVMNTQLWVGLVVATWVGGFVHSIVQLALMLPLPFCGPNILDNFYCD
VPQVLRLACTDTSLLEFLKISNSGLLDVVWFFLLLMSYLFILVMLRSHPGEARRKAASTC
TTHIIVVSMIFVPSIYLYARPFTPFPMDKLVSIGHTVMTPMLNPMIYTLRNQDMQAAVRR
LGRHRLV

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_9|924_bp
atggaaacagggaacctcacgtgggtatcagactttgtcttcctggggctctcgcagact
cgggagctccagcgtttcctgtttctaatgttcctgtttgtctacatcaccactgttatg
ggaaacatccttatcatcatcacagtgacctctgattcccagctccacacacccatgtac
tttctgctccgaaacctggctgtcctagacctctgtttctcttcagtcactgctcccaaa
atgctagtggacctcctctctgagaagaaaaccatctcttaccagggctgcatgggtcag
atcttcttcttccactttttgggaggtgccatggtcttcttcctctcagtgatggccttt
gaccgcctcattgccatctcccggcccctccgctatgtcaccgtcatgaacactcagctc
tgggtggggctggtggtagccacctgggtgggaggctttgtccactctattgtccagctg
gctctgatgctcccactgcccttctgtggccccaacattttggataacttctactgtgat
gttccccaagtactgagacttgcctgcactgacacctcactgctggagttcctcaagatc
tccaacagtgggctgctggatgtcgtctggttcttcctcctcctgatgtcctacttattc
atcctggtgatgctgaggtcacatccaggggaggcaagaaggaaggcagcttccacctgc
accacccacatcatcgtggtttccatgatcttcgttccaagcatttacctctatgcccgg
cccttcactccattccctatggacaagcttgtgtccatcggccacacagtcatgaccccc
atgctcaaccccatgatctataccctgaggaaccaggacatgcaggcagcagtgagaaga
ttagggagacaccggctggtttga

>gi568815581f:57987091_58189276|GENSCAN_predicted_peptide_10|50_aa
XWQFSHSQGFDLDKPAQNFKLLLSQEPSMVELLATGLIRSLYLLSSNGPN

>gi568815581f:57987091_58189276|GENSCAN_predicted_CDS_10|153_bp
nnatggcagttcagccactcccagggttttgaccttgataagccagctcaaaacttcaag
cttctgctttcacaagaaccgtccatggtggagctgctggccacaggcctgattagatct
ctttatctgctcagctccaacggccccaactga