GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:21:58

Sequence gi568815581f:45508571_45708915 : 200345 bp : 45.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -    404    399    6                               1.05
 1.12 Term -    486    462   25  2  1   41   50    67 0.007  -4.10
 1.11 Intr -   1723   1674   50  1  2   91   94    33 0.030   1.68
 1.10 Intr -   4719   4615  105  0  0  103   79    57 0.974   6.71
 1.09 Intr -   5585   5298  288  2  0    6   78   253 0.578  13.54
 1.08 Intr -   6597   6182  416  1  2   42   94   217 0.593  11.52
 1.07 Intr -   6809   6669  141  0  0   30   38   175 0.674   7.02
 1.06 Intr -   8712   8586  127  0  1  103    5    41 0.742  -2.45
 1.05 Intr -   9578   9291  288  2  0    6   78   253 0.563  13.54
 1.04 Intr -  10590  10433  158  1  2   42   59   118 0.713   4.03
 1.03 Intr -  10802  10662  141  0  0   30   38   175 0.470   7.02
 1.02 Intr -  12855  12737  119  2  2   98   72     5 0.462   0.01
 1.01 Init -  20520  20459   62  0  2  106   36    58 0.626   3.12
 1.00 Prom -  30211  30172   40                              -1.86

 2.03 PlyA -  30908  30903    6                               1.05
 2.02 Term -  41485  39153 2333  2  2  103   48  1197 0.069 102.58
 2.01 Init -  47286  47142  145  0  1   67   66    98 0.048   5.78
 2.00 Prom -  52923  52884   40                              -3.06

 3.00 Prom +  55532  55571   40                              -3.56
 3.01 Init +  77424  78339  916  2  1   75   69   986 0.946  87.63
 3.02 Intr +  78379  78456   78  2  0  129   81    40 0.944   6.92
 3.03 Term +  88430  88476   47  0  2   33   40    91 0.006  -3.83
 3.04 PlyA +  89112  89117    6                               1.05

 4.03 PlyA -  89400  89395    6                               1.05
 4.02 Term -  93316  92299 1018  0  1   69   42  1648 0.730 149.89
 4.01 Init -  93830  93445  386  2  2   82   26   419 0.563  31.41
 4.00 Prom -  96622  96583   40                              -5.66

 5.00 Prom +  99062  99101   40                              -8.56
 5.01 Init + 100001 100344  344  1  2   75   75   382 0.139  32.31
 5.02 Intr + 107469 107569  101  0  2   71   26    46 0.002  -3.55
 5.03 Intr + 124480 124604  125  2  2  109   55    51 0.688   4.20
 5.04 Term + 127713 127874  162  2  0   70   43   158 0.893   7.44
 5.05 PlyA + 129362 129367    6                               1.05

 6.09 PlyA - 129809 129804    6                               1.05
 6.08 Term - 148061 147990   72  2  0   94   41    67 0.159   0.51
 6.07 Intr - 162191 162069  123  2  0   52   86    90 0.353   5.98
 6.06 Intr - 163627 163548   80  2  2  105   64    23 0.196   0.87
 6.05 Intr - 164051 163970   82  2  1  133   68    25 0.162   4.21
 6.04 Intr - 193307 193223   85  1  1   88  105    71 0.796   8.62
 6.03 Intr - 196100 196025   76  0  1  103   91    10 0.360   1.37
 6.02 Intr - 196968 196896   73  0  1  105   49    35 0.274   0.28
 6.01 Init - 197172 197107   66  0  0  110   98    14 0.678   5.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  76398  76254  145  0  1   92   94   181 0.991  17.53
S.002 Sngl + 100001 100348  348  1  0   75   49   395 0.839  30.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:45508571_45708915|GENSCAN_predicted_peptide_1|639_aa
MPSISIVFEEKSAINLIEDPLILPSHMACCLCQLKNSIEAVCKTVKLHCNSACLTNTIHC
PEEESVGNPEGAFMKMLQARKNYTSTELTVEPEEPSDSSGINLSGFGTVNLDVESMLLPF
IKLPTTGNSLAKIQTVGQNRQKVNRVLMGPMSIQKRHFKEFEIQLTQQLQSLIPNNNVRR
LISHVIRTLKMDCSGAHVQVTCAKLISRTGHLMKLLSGQQEVKASEIEWDTDQWKTENYI
NESTEAQSEQKEKSLELTKEVPGYGYTDKLILALIVTEILMILIILFCLIVVRTIINSAE
EESVGNPEGAFMKMLQARKNYTSTELTVEPEEPSDSSGINLSGFGTVNLDVESMLLPFIK
LPTTGNSLAKIQTVGQNWQKVNRVLMGPMSIQKRHFKEVGRQSIRREQGAQASVENAAEE
KRLGSPAPRELEQPHTQQGPEKLAGNAIYTKPSFSQEHKAAVSVLTPFSKGAPSTSSPAK
ALPQFEIQLTQQLQSLIPNNNVRRLISHVIRTLKMDCSGAHVQVTCAKLISRTGHLMKLL
SGQQEVKASEIEWDTDQWKTENYINESTEAQSEQKEKSLELTKEVPGYGYTDKLILALIV
TEILMILIILFCLIVMCCHRRSLQEDEEGFSSDSQPYED

>gi568815581f:45508571_45708915|GENSCAN_predicted_CDS_1|1920_bp
atgcccagcatctccattgtttttgaagagaaatcagctattaatcttattgaggatccc
ttgatcttacctagccatatggcctgctgcctctgccaacttaaaaacagcattgaggct
gtctgcaagacagtcaagctgcattgcaacagtgcatgtctgacaaacaccatacattgt
cctgaagaagaatctgtagggaatccagaaggagcattcatgaagatgttacaagcccgg
aagaattacacaagcactgagctgactgttgagccggaggagccctcagacagcagtggc
atcaacttgtcaggctttgggacagtaaacctagatgtggaatcaatgttactaccgttc
attaaactgccaaccacaggaaacagcctggcaaagattcaaactgtaggccaaaaccgg
caaaaagtgaatagagtcctcatgggcccaatgagcatccagaaaaggcacttcaaagag
tttgaaattcagctaacccagcagctacagtcccttatccccaacaacaatgtgagaagg
ctcatttctcatgttatccggaccttgaagatggactgctctggggcccatgtgcaagtg
acctgtgccaagctcatctccaggacaggccacctgatgaagcttctcagtgggcagcag
gaagtaaaggcatctgagatagaatgggatacggaccaatggaagactgagaactacatt
aatgagagcacggaagcccagagtgaacagaaagagaagtcgcttgagctcacaaaagaa
gttccaggatacggctatactgacaaactcatcttggcattaattgtgactgaaatacta
atgattttgattatacttttctgcctcattgtggtaaggacaataattaattcagctgaa
gaagaatctgtagggaatccagaaggagcattcatgaagatgttacaagcccggaagaat
tacacaagcactgagctgactgttgagccggaggagccctcagacagcagtggcatcaac
ttgtcaggctttgggacagtaaacctagatgtggaatcaatgttactaccgttcattaaa
ctgccaaccacaggaaacagcctggcaaagattcaaactgtaggccaaaactggcaaaaa
gtgaatagagtcctcatgggcccaatgagcatccagaaaaggcacttcaaagaggtggga
aggcagagcatcaggagggaacagggtgcccaggcatctgtggagaacgctgccgaagaa
aaaaggctcgggagtccagccccaagggagctggaacagcctcacacacagcaggggcct
gagaagttagcgggaaacgccatctacaccaagccttcgttcagccaagagcataaggca
gcagtctctgtgctgacacccttctccaagggcgcgccttctacctccagccctgcaaaa
gccctaccacagtttgaaattcagctaacccagcagctacagtcccttatccccaacaac
aatgtgagaaggctcatttctcatgttatccggaccttgaagatggactgctctggggcc
catgtgcaagtgacctgtgccaagctcatctccaggacaggccacctgatgaagcttctc
agtgggcagcaggaagtaaaggcatctgagatagaatgggatacggaccaatggaagact
gagaactacattaatgagagcacggaagcccagagtgaacagaaagagaagtcgcttgag
ctcacaaaagaagttccaggatacggctatactgacaaactcatcttggcattaattgtg
actgaaatactaatgattttgattatacttttctgcctcattgtgatgtgttgtcaccga
aggtcattacaagaagatgaagaaggattctcaagcgacagccagccgtatgaagactga

>gi568815581f:45508571_45708915|GENSCAN_predicted_peptide_2|825_aa
MITQIGILNPLVWVGFKTVVIPMKGKIAQIAIEKALSDAFQKLLIVVLEMPAPPQESTEN
LVPFLDTWDSAGEQPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIG
IARQLSTPQSQKQTLQNEYSSTDTPYPSSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQ
NPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPP
GEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIE
PPVSPMEHELSISEQQQPVQPSESSREVESSLTQQETPGQPPEHHEVTVSPPGHHQTHHL
DSPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATARLSGSGNDVEPPAIQHGGPPLLPES
SEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEF
PNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVY
QGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTAPKRTIVSPKHPEVTL
PHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDK
GQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQPPDLGLAIIPEPTTETGH
STALEKTTAPHPDRVQSLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEQKAS
TSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTIL

>gi568815581f:45508571_45708915|GENSCAN_predicted_CDS_2|2478_bp
atgatcactcagataggcatcttaaatccattagtttgggttggatttaagaccgttgtc
attcctatgaaagggaagatagcccagattgctattgagaaggctttgtcagatgcattc
cagaaactgttgattgtggttctagagatgccagccccaccccaggaatcgactgaaaat
ttggttccattcctggacacctgggattcagctggagagcagcccctggagccagagcag
ttcttggcttcacagcaggatttaaaggacaagctgagtccacaggaaagactccctgtt
tcgcccaagaagctgaagaaagatccagctcagcgttggagccttgctgagattattgga
attgcacgccaattatccacacctcagagtcagaaacagactttgcagaatgaatattcc
agtacagatacaccgtatcccagtagcctgcctccagaactccgggtgaagtcagatgag
cctccagggccctctgagcaagttggaccttctcaattccatctagagcccgaaactcaa
aatccagagacccttgaagacatccagtcctcttcactccagcaagaagccccagcacag
cttccacagctccttgaggaagaaccttcttcaatgcagcaggaggccccagctctgcct
ccagagtcctctatggagagtctaactctaccgaatcatgaggtgtcagttcaacctcca
ggtgaggatcaagcttattatcacttgcccaacattacagttaaacctgcagatgtggag
gttaccataacttcagagcctaccaatgagacagaatcttcccaagcccagcaggagacc
ccaattcagtttccagaggaggtggaaccttctgcaacccaacaggaggccccaattgag
cctccagtttctcctatggagcatgaactttccatcagtgagcagcagcagccagttcag
ccttctgagtcttctagggaggtcgaatcttctctgacccagcaggagaccccaggtcag
cctccagaacatcatgaagtcacagtttcacctccaggtcaccatcaaactcatcattta
gattcacccagtgtctctgtgaagcctccagacgtgcagctcaccatagcagcagagcct
agtgcagaggtgggaacttctctagtccaccaggaggctacagctcggctctcagggtca
ggtaatgatgtagaacctcccgccatccagcacgggggcccacctctgcttccagagtca
tcagaagaagctggacctttagcagttcaacaggagacttcatttcaatctccggaacct
attaataatgagaacccctctccaacccagcaggaggctgcagctgagcatccacagacc
gctgaggagggtgagtcttccctaacccatcaggaggccccagctcagactccagagttc
cctaatgtagttgtagctcaacctccagagcattcacacctgactcaagccacagttcaa
cctttggatctggggtttaccatcactccagaatccatgacagaggttgaactttctcca
accatgaaggagaccccaactcagcctcctaagaaagttgtaccccaacttcgagtatat
caaggggtaacaaatccaacaccaggtcaggatcaagctcagcatccagtgtcacccagc
gttacagttcaacttttggacctgggacttaccatcactccagaacccactacggaggtt
ggacattctacagccccgaagaggactatagtttctccaaagcatcctgaggtgacactt
ccacatccagaccaggttcagactcagcattcacacctgactcgagccacagttcaacct
ttggacctggggtttaccatcactccaaaatccatgacagaggttgaaccttctacagcc
ctgatgactacagctcctcctccaggacaccctgaggtgacacttccaccttcagacaag
ggtcaggctcagcattcacacctgactcaagccaccgttcaacctctggacctggagctt
accataactacaaaacctactacagaggttaaaccatctccaaccacagaggagacctca
actcagcctccagacctgggacttgccatcattccagaacccactacagagactggacat
tctacagccctggagaagactacagctcctcatccagaccgggttcagagtctgcatcga
agcctgactgaagtcacaggtccacctactgaactagaacctgctcaggattcactggtg
cagtctgaaagttacacccaaaataaggctttaactgcaccagaggaacagaaggcctcc
acaagcaccaacatatgtgagctctgtacctgcggagatgagatgttgtcatgtattgat
ctcaacccagagcagaggctccgccaagtgcctgtgccagagcccaacacccacaatggc
accttcaccatcttgtaa

>gi568815581f:45508571_45708915|GENSCAN_predicted_peptide_3|346_aa
MAGHPQAGWAARRRLGQRCSSGGCLRKCMSTSYPAVPARGPPLRVPPDDDLQRPEPRLRI
CPLQLAARRAGRHRPLHNHPLRPSCPLLLCRSTGKCELSVDCLPPNLTRTALQPALQPLG
PGLQEARLLPSPGPAPGQIALLKFSSHWTAAMAKKALEEGQPHLCGEQVAVEWLKPELKQ
RLRQQLVGPSLWSPQPDGSQLALARDKLGSQGARATLQLLCQRMKLGSSVFLTKCLGIGP
AGWHRFWYQVVIPGHPVPFSGLIWVVLILDGRDGHEVAKDAVSVRLLQALIESGANLLWS
AGAEAGSPNGHAQPVSGPNPADLGGHYLTPKVESMDEEPADLEGQL

>gi568815581f:45508571_45708915|GENSCAN_predicted_CDS_3|1041_bp
atggcgggccacccccaggctgggtgggcagcccgccgccggctgggtcagaggtgttca
tcgggcggctgcctcaggaagtgtatgagcaccagctatcctgctgttccagcgcgtggg
ccgcctctacgagttccgcctgatgatgaccttcagcggcctgaaccgcggcttcgcata
tgcccgctgcagctcgcggcgcggcgcgcaggccgccatcgcccgctgcacaaccacccg
ctgcggccgtcctgcccgctgcttctgtgccgcagcaccgggaagtgtgagctgagcgtt
gactgcctgccgccgaatctgacccgcaccgcgctgcagcccgcgctgcagccgctgggt
cccggcctgcaggaggcgcggctgctgcccagccccggaccggcgcccgggcagatcgct
ctgctcaaattcagctcgcactggaccgctgccatggccaaaaaggccctggaggaaggg
cagccacacctctgtggagagcaggtggctgtggagtggctcaagccagaactgaagcag
cgacttcgccagcagcttgtgggtccctccttgtggtccccacagccagacggcagccag
ttggccttggcaagggacaagttagggtcccaaggggctcgggctaccctgcagttgctg
tgccaacgaatgaagctgggcagctctgtgttcctcaccaagtgtttgggcataggacct
gctggctggcaccgcttctggtaccaggtggtgattcctgggcatccggtgcccttcagc
ggcctcatctgggttgtgctgatcctagatggccgggatgggcatgaggtggccaaggat
gctgtgtctgtacggctgctgcaggcactcattgagtctggggccaacctcctgtggtct
gctggggctgaggcaggcagcccgaatgggcatgcacagcctgtgtcaggccccaaccca
gcagacctgggtggccactatctgacccccaaagttgaatccatggatgaggaacctgca
gatctggagggccagctgtag

>gi568815581f:45508571_45708915|GENSCAN_predicted_peptide_4|467_aa
MKRIKKERRKEKKKEKKREGSAGGGGAGSRLQAEMLQMDLIDATGDTPGAEDDEEDDDEE
RAARRPGAGPPKAESGQEPASRGQGQSQGQSQGPGSGDTYRPKRPTTLNLFPQVQLSQDT
LNNNSLGKKSRHLHQQPTLLVDEHAQLEPVSLRPCFGDYSDESDSAIVYDNCASVSSPYE
SAIGEEYEEASRPQPPACLSKDSTPDEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCII
NREEQEQTHRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYA
IEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFN
PPSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHL
ADHRFACHVFVSEDSTKALAESVGRAFQQFHKQFVEYTCPTEDIYLE

>gi568815581f:45508571_45708915|GENSCAN_predicted_CDS_4|1404_bp
atgaagagaataaagaaagaaagaagaaaagaaaagaaaaaagaaaagaaaagggagggc
tctgcgggtggcggcggcgcggggagccggttgcaggccgagatgctgcagatggacctg
atcgacgcgacgggggacactcccggggccgaggacgacgaggaggacgacgacgaggag
cgcgcggcccggcggccgggagcggggccgcccaaggccgagtccggccaggagccggcg
tcccgcggccagggccagagccaaggccagagccagggcccgggcagcggggacacgtac
cggcccaagcggcccaccacgctcaacctctttccgcaggtgcagttgtctcaggacaca
ctgaataataattctctgggcaaaaaatcgaggcacctccaccaacagcccacgctgctg
gtagatgagcacgcgcagctggagccggtgagcctgcggccgtgcttcggagactacagt
gacgagagtgactcggccatcgtctatgacaactgtgcctccgtctcctcgccctatgag
tcagccatcggagaggaatatgaggaggcctcccggccccagcctcctgcctgcctctcc
aaggactccacgcctgacgaacccgacgtccatttctccaagaagttcctgaacatcttc
atgagtggccgctcccgctcctccagtgccgagtccttcgggctgttctcctgcatcatc
aaccgggaggagcaggagcagacccaccggaccatattcaggtttgtgcctcgacacgaa
gacgaacctgagctggaagtggatgaccctctgctagtggagctccaggctgaagactac
tggtacgaggcctacaacatgcgcactggtgcccggggcttctttactgcctattacgcc
atcgaagtcaccaaggagcccgagcacatggcagccctggctaaaaacagtgactgggtg
gaccagttccgggtgaagttcctgggctcagtccaggttccctatcacaagggcgatgtc
gtcctctctgccgctatgcaaaagattgccaccacccgccggctaaccgtgcactttaac
ccgccctccagctgtgtcctggagatcagcgtgcggggtgtgaagataggtgtcaaggcc
gatgactcccaggaggccaaggggaataaatgtagccactttttccagttaaaaaacatc
tctttccgcggatatcatccaaagaacaacaagtactttgggttcatcaccaagcacctc
gccgaccaccggtttgcctgccacgtctttgtgtctgaagactccaccaaagccctggca
gagtccgtggggagagcattccagcagtttcacaagcagtttgtggagtacacctgcccc
acagaagatatctacctggagtag

>gi568815581f:45508571_45708915|GENSCAN_predicted_peptide_5|243_aa
MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEVSVFD
AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPGPPPKPIQDLST
YYLQDSPYVNLYSNSRMDVLLLRELRDRGLIFMVDSNDREQIDEAWEVLTYLLEDDELRN
AVLLVFANKQDLPNTMNAAEITDKLGLHSLRYRNWHIQATCATTGHGLYEGLNWLANQFQ
NQN

>gi568815581f:45508571_45708915|GENSCAN_predicted_CDS_5|732_bp
atgacaaagaaaagaaggaacaatggtcgtgccaaaaagggccgcggccacgtgcagcct
attcgctgcactaactgtgcccgatgcgtgcccaaggacaaggccattaagaaattcgtc
attcgaaacatagtggaggccgcagcagtcagggacatttctgaagtgagcgtcttcgat
gcctatgtgcttcccaaactgtatgtgaagctacattactgtgtgagttgtgcaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccccaggtcccccaccaaagcccatacaggatcttagcacc
tactatttgcaagactccccctatgttaacctttacagcaactctcggatggatgtttta
ttattgagagaactgagagacagaggtctgatttttatggttgacagtaatgacagagag
cagattgatgaggcctgggaagtgctaacttacttgttagaggacgatgagctcagaaat
gcagttttattggtatttgccaataaacaagatctccctaatactatgaacgcggcagag
ataacggacaagctcggcctccattccctccgctacagaaactggcacattcaggctact
tgtgccactactggacatgggctttacgaaggcctgaactggctcgccaaccagttccag
aaccagaactga

>gi568815581f:45508571_45708915|GENSCAN_predicted_peptide_6|218_aa
MASVSTSWACSKSPEFPHSLGQVPRLAPDADGAAVVNPRFGSCVAAARWSPLELSRSPNT
SDLPITASVFTRTSSRARVNIGAKHSFAEWMNGSCRSLDLGSHPLSHIPDPAASTCWAPP
AAYAVPTRCTCARTEPKRHSEGQLLELGLEEGQGSCNTHAKVRGSIPEVGETTNPPEGTN
SVHTRAAFSLVEKAKIFPQGKFRLKVQSMDALCGHDFM

>gi568815581f:45508571_45708915|GENSCAN_predicted_CDS_6|657_bp
atggcatcagtaagcaccagctgggcctgctccaagtcccctgagtttccacattccctt
gggcaggtcccaagactggcccctgatgcagatggggcagcagtggtaaatcccaggttt
ggctcctgtgttgctgcagcccgctggagcccactggaactctcccgctccccaaataca
agtgacttgccaattactgcttctgtctttacaaggacgtcttctagggctagagttaac
ataggtgccaaacactcgtttgctgaatggatgaacggctcctgccgatcattggatctg
gggtctcaccctctctcgcacatcccagatcccgccgcctccacgtgctgggcaccacct
gcagcctacgcagtgcctacacgttgcacctgtgcaaggactgagccgaaaaggcacagt
gaggggcagctgctggagctggggttggaagagggccaagggagctgtaacactcatgcg
aaggtccgtggctccattcctgaagttggtgagaccacgaacccaccggaaggaaccaac
tccgtacacactagggctgccttcagcctggtcgaaaaagccaagatctttccacaaggc
aaattccgcttgaaggtccaatccatggatgcactgtgtggacatgacttcatgtga