GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:01:49

Sequence gi568815581f:16317669_16536886 : 219218 bp : 48.91% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    107    240  134  0  2  102  100   203 0.995  23.26
 1.02 Term +   8132   8230   99  1  0   94   48    81 0.979   2.83
 1.03 PlyA +  10135  10140    6                               1.05

 2.06 PlyA -  13749  13744    6                               1.05
 2.05 Term -  25273  25149  125  2  2   78   49   178 0.954  11.45
 2.04 Intr -  27043  26929  115  1  1   58  109    80 0.994   7.12
 2.03 Intr -  31017  30948   70  2  1   58   86    65 0.729   2.48
 2.02 Intr -  32361  32263   99  2  0   59   89    52 0.712   1.63
 2.01 Init -  35768  35359  410  2  2   94   70   552 0.984  50.03
 2.00 Prom -  41535  41496   40                              -3.86

 3.00 Prom +  56960  56999   40                              -4.66
 3.01 Init +  61414  61446   33  0  0  107   77    75 0.141   6.23
 3.02 Term +  64234  64929  696  0  0   67   31  1342 0.168 119.95
 3.03 PlyA +  65050  65055    6                               1.05

 4.04 PlyA -  65814  65809    6                               1.05
 4.03 Term -  73945  73827  119  2  2  105   47   168 0.962  13.10
 4.02 Intr -  87661  87611   51  2  0  108   63    20 0.287   0.38
 4.01 Init -  89425  89347   79  1  1   58   89    38 0.404   0.78
 4.00 Prom -  91924  91885   40                              -8.66

 5.00 Prom +  93006  93045   40                              -4.96
 5.01 Init +  96791  96794    4  1  1   97   68     0 0.276  -0.94
 5.02 Intr +  98104  98173   70  2  1  103   60    43 0.694   1.24
 5.03 Intr + 100033 100200  168  1  0   62   94   174 0.700  14.46
 5.04 Intr + 102447 102580  134  0  2   53   74   233 0.999  18.69
 5.05 Intr + 104931 105221  291  1  0  117  109   323 0.997  34.41
 5.06 Intr + 105801 106099  299  1  2   93   83   323 0.992  28.89
 5.07 Intr + 108431 108601  171  1  0   30  105   226 0.969  18.64
 5.08 Intr + 109054 109217  164  0  2   81   41   202 0.014  13.57
 5.09 Intr + 111149 111314  166  2  1   62  100   209 0.982  19.46
 5.10 Intr + 114116 114182   67  1  1   68   71    99 0.911   4.68
 5.11 Intr + 114298 114632  335  2  2   92   50   681 0.810  59.99
 5.12 Intr + 115906 116030  125  0  2  106  109   150 0.999  18.28
 5.13 Intr + 118563 118648   86  0  2   66   55   122 0.724   6.16
 5.14 Intr + 121659 121746   88  1  1   69  106    45 0.603   3.43
 5.15 Intr + 122517 122585   69  0  0   65   99    59 0.377   3.00
 5.16 Term + 123406 123412    7  1  1   97   54     0 0.337  -5.16
 5.17 PlyA + 123510 123515    6                               1.05

 6.04 PlyA - 123904 123899    6                              -0.45
 6.03 Term - 126463 125920  544  0  1  111   44   704 0.996  62.04
 6.02 Intr - 130292 130177  116  2  2   93  105   129 0.868  14.35
 6.01 Init - 130603 130601    3  1  0   91  101     0 0.846   1.60
 6.00 Prom - 135086 135047   40                              -4.86

 7.00 Prom + 136418 136457   40                              -5.66
 7.01 Init + 137465 137475   11  1  2   41   77    15 0.037  -4.89
 7.02 Term + 138293 138872  580  2  1   63   35   486 0.259  34.76
 7.03 PlyA + 141223 141228    6                               1.05

 8.04 PlyA - 143090 143085    6                              -0.45
 8.03 Term - 144718 144449  270  1  0  135   51   293 0.510  25.78
 8.02 Intr - 145939 145846   94  0  1   69   43    75 0.842   1.07
 8.01 Init - 146998 146937   62  1  2   57  100    64 0.919   5.22
 8.00 Prom - 154404 154365   40                              -5.26

 9.05 PlyA - 156774 156769    6                               1.05
 9.04 Term - 166927 166825  103  0  1   38   48   109 0.145  -0.35
 9.03 Intr - 170386 170316   71  1  2   40   53   105 0.231   0.18
 9.02 Intr - 173807 173775   33  2  0  119   60    15 0.439   0.22
 9.01 Init - 174322 174077  246  1  0   95   99   367 0.999  34.10
 9.00 Prom - 202047 202008   40                              -1.96

10.02 PlyA - 204472 204467    6                               1.05
10.01 Term - 218252 217974  279  2  0   51   49   192 0.688   7.05

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  64240  64929  690  0  0   82   31  1336 0.821 123.50
S.002 Term + 109054 109221  168  0  0   81   51   196 0.980  13.08
S.003 Init + 109820 109879   60  1  0   46  109   129 0.980  10.54
S.004 Term + 119121 119221  101  1  2   71   45    71 0.885  -0.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_1|77_aa
XCSVLTLQSVNVLRKYISLLDLPLSLLHTQDVLFVLNSKEVAQAKKAMSCHRSQLLWFRR
LYIIFSRYMRINSLSFL

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_1|234_bp
nggtgctctgtgctcacgcttcagtctgtgaatgtgctgcgcaagtacatctcccttctg
gatctgcccttgtctctgcttcatacgcaggatgtcctcttcgtgctcaacagcaaagaa
gtggcacaggccaagaaagccatgtcctgccaccgcagccagctcctctggttccgccgc
ctctacattatcttctcccggtacatgagaatcaactcactgagcttcctctga

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_2|272_aa
MRRSRSSAAAKLRGQKRSGASAAPAASAAAALAPSATRTRRSASQAGSKSQAVEKPPSEK
PRLRRSSPRAQEEGPGEPPPPELALLPPPPPPPPTPATPTSSASNLDLGEQRERWETFQK
RQKLTSEGAAKLLLDTFEYQGLVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNR
HFIVPASRFKLLKGAEHITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDE
GTVRSMVTEEFNGSDWEKAMKEHKTIKNMSKE

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_2|819_bp
atgcggcgatcgaggagctctgcggccgccaagctgcgcgggcagaagcggtccggggcc
tccgcggcccccgcggcctccgcggccgctgccttggcacccagcgccacccgcacacgg
cgctccgctagccaggccgggagcaagagccaggcggtggagaagccgccgtcggagaag
ccgcggctgaggcgctcgtcgccgcgggcccaggaggagggcccgggggagccgccgccg
cctgagctggcgttgctcccgccaccgccgccgccgccgccgactcccgcgaccccgacg
tcctcggcgtccaacctggacctgggcgagcagcgggagcgctgggagacgttccagaag
cggcagaagcttacctccgagggtgccgccaagctcctgctagacacctttgaataccag
ggcctggtgaagcacacaggaggctgccactgtggagcagttcgttttgaagtttgggcc
tcagcagacttgcatatatttgactgcaattgcagcatttgcaagaagaagcagaataga
cacttcattgttccagcttctcgcttcaagctcctgaagggagctgagcacataacgact
tacacgttcaatactcacaaagcccagcataccttctgtaagagatgtggcgttcagagc
ttctatactccacgatcaaaccccggaggcttcggaattgccccccactgcctggatgag
ggcactgtgcggagtatggtcactgaggaattcaatggcagcgattgggagaaggccatg
aaagagcacaagaccatcaagaacatgtctaaagagtga

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_3|242_aa
MGSSLASLGLVVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG
KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ
DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
GC

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_3|729_bp
atgggctccagcctcgcctctctgggcctggtggtcaaaatgcagatcttcgtgaaaacc
cttaccggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaag
gccaagatccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggc
aagcagctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctg
cacctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaag
accatcaccctggaagtggagcccagtgacaccatcgaaaatgtgaaggccaagatccag
gataaagaaggcatccctcccgaccagcagaggctcatctttgcaggcaagcagctggaa
gatggccgcactctttctgactacaacatccagaaggagtcgaccctgcacctggtcctg
cgtctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaagaccatcactctg
gaggtggagcccagtgacaccatcgaaaatgtgaaggccaagatccaagataaagaaggc
atcccccccgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcact
ctttctgactacaacatccagaaagagtcgaccctgcacctggtcctgcgcctgaggggt
ggctgttaa

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_4|82_aa
MQADGGTTAFPSGLEGGGRPGSALWSVYKTGEKGESKKLERNRSPAEERAAMLALHLPET
LGQFTFQSHIVTAEVEAQRDAS

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_4|249_bp
atgcaggcggacggcgggaccacagcatttccctccggcttggagggcggaggccgaccc
gggagcgcgctctggagcgtttataagacaggagaaaagggagaaagcaaaaagttggaa
agaaacagaagtcctgcagaagagcgggctgccatgctggctttgcatcttccagagacg
cttggccagttcaccttccagagccacatcgtcacggctgaagtagaagcccagagagat
gccagttga

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_5|747_aa
MAPATEKLRDPSSRHALASACGVSRLETLDGGQEDGSEADRGKLDFGSGLPPMESQFQGE
DRKFAPQIRVNLNYRKGTGASQPDPNRFDRDRLFNAVSRGVPEDLAGLPEYLSKTSKYLT
DSEYTEGSTGKTCLMKAVLNLKDGVNACILPLLQIDRDSGNPQPLVNAQCTDDYYRGHSA
LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTKQWDVVS
YLLENPHQPASLQATDSQGNTVLHALVMISDNSAENIALVTSMYDGLLQAGARLCPTVQL
EDIRNLQDLTPLKLAAKEGKIEIFRHILQREFSGLSHLSRKFTEWCYGPVRVSLYDLASV
DSCEENSVLEIIAFHCKSPHRHRMVVLEPLNKLLQAKWDLLIPKFFLNFLCNLIYMFIFT
AVAYHQPTLKKARALFQALLTVVSQVLCFLAIEWYLPLLVSALVLGWLNLLYYTRGFQHT
GIYSVMIQKVILRDLLRFLLIYLVFLFGFAVALVSLSQEAWRPEAPTGPNATESVQPMEG
QEDEGNGAQYRGILEASLELFKFTIGMGELAFQEQLHFRGMVLLLLLAYVLLTYILLLNM
LIALMSETVNSVATDSWSIWKLQKAISVLEMENGYWWCRKKQRAGVMLTVGTKPDGSPDE
RWCFSPANVDKNHMQPTLHNASHYLEGRTAQNGGPHLPEPGVCEGRDPVPRPTVGVCKPE
RTGLQIREESASCLAAEYWSQEPAMRF

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_5|2244_bp
atggcccctgctactgagaagctccgggatcccagcagccgccacgccctggcctcagcc
tgcggggtaagtcggttggagacattagatggaggccaagaagatggctctgaggcggac
agaggaaagctggattttgggagcgggctgcctcccatggagtcacagttccagggcgag
gaccggaaattcgcccctcagataagagtcaacctcaactaccgaaagggaacaggtgcc
agtcagccggatccaaaccgatttgaccgagatcggctcttcaatgcggtctcccggggt
gtccccgaggatctggctggacttccagagtacctgagcaagaccagcaagtacctcacc
gactcggaatacacagagggctccacaggtaagacgtgcctgatgaaggctgtgctgaac
cttaaggacggagtcaatgcctgcattctgccactgctgcagatcgacagggactctggc
aatcctcagcccctggtaaatgcccagtgcacagatgactattaccgaggccacagcgct
ctgcacatcgccattgagaagaggagtctgcagtgtgtgaagctcctggtggagaatggg
gccaatgtgcatgcccgggcctgcggccgcttcttccagaagggccaagggacttgcttt
tatttcggtgagctacccctctctttggccgcttgcaccaagcagtgggatgtggtaagc
tacctcctggagaacccacaccagcccgccagcctgcaggccactgactcccagggcaac
acagtcctgcatgccctagtgatgatctcggacaactcagctgagaacattgcactggtg
accagcatgtatgatgggctcctccaagctggggcccgcctctgccctaccgtgcagctt
gaggacatccgcaacctgcaggatctcacgcctctgaagctggccgccaaggagggcaag
atcgagattttcaggcacatcctgcagcgggagttttcaggactgagccacctttcccga
aagttcaccgagtggtgctatgggcctgtccgggtgtcgctgtatgacctggcttctgtg
gacagctgtgaggagaactcagtgctggagatcattgcctttcattgcaagagcccgcac
cgacaccgaatggtcgttttggagcccctgaacaaactgctgcaggcgaaatgggatctg
ctcatccccaagttcttcttaaacttcctgtgtaatctgatctacatgttcatcttcacc
gctgttgcctaccatcagcctaccctgaagaaggcaagggccctgttccaggccctgctc
acagtggtgtcccaggtgctgtgtttcctggccatcgagtggtacctgcccctgcttgtg
tctgcgctggtgctgggctggctgaacctgctttactatacacgtggcttccagcacaca
ggcatctacagtgtcatgatccagaaggtcatcctgcgggacctgctgcgcttccttctg
atctacttagtcttccttttcggcttcgctgtagccctggtgagcctgagccaggaggct
tggcgccccgaagctcctacaggccccaatgccacagagtcagtgcagcccatggaggga
caggaggacgagggcaacggggcccagtacaggggtatcctggaagcctccttggagctc
ttcaaattcaccatcggcatgggcgagctggccttccaggagcagctgcacttccgcggc
atggtgctgctgctgctgctggcctacgtgctgctcacctacatcctgctgctcaacatg
ctcatcgccctcatgagcgagaccgtcaacagtgtcgccactgacagctggagcatctgg
aagctgcagaaagccatctctgtcctggagatggagaatggctattggtggtgcaggaag
aagcagcgggcaggtgtgatgctgaccgttggcactaagccagatggcagccccgatgag
cgctggtgcttcagtcctgctaatgtggacaaaaaccacatgcagcccacgctacacaat
gcctcccactacctggaaggccgcactgctcagaatggagggccacatctgccagagcct
ggagtctgcgaaggccgggacccggttccccggcccacagtgggggtgtgcaaacccgag
agaactgggttgcaaattcgtgaagaatcagcatcatgtttggcagctgagtattggagc
caggagcctgccatgaggttttga

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_6|220_aa
MEGDALGAMEKLCRQLTYHLSPHSQWRRHRGLVKRKPQACLKAVLAGSPPDNTVDLSGIP
LTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGNRLTR
AVLRDLTDILKDPSKFPNVTWIDLGNNVDIFSLPQPFLLSLRKRSPKQGHLPTILELGEG
PGSGEEVREGTVGQEDPGGGPVAPAEDHHEGKETVAAAQT

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_6|663_bp
atggaaggcgatgcactgggcgccatggagaagctgtgccggcagctgacataccacctc
agcccccactcccagtggaggcggcaccgggggctggtgaaaaggaagccacaggcctgc
ctcaaggctgtcctggccggaagccccccagacaacacagtggacctgtcgggaatccca
ctgacctcccgagacctggagcgggtgaccagctacctacagcgctgtggggagcaggta
gacagcgtggagctgggcttcacaggcctcacggacgacatggtcctgcagctgctgcca
gcactcagcaccctgccccgcctcaccacactggcactcaatggcaaccggttgacccgg
gccgtgctgcgcgacctcactgacatccttaaggatcccagcaagttccccaatgtcacg
tggattgacctgggcaacaacgtggacatcttctccttgccccagcccttcctgctcagc
ctgcgcaagcgctccccaaagcagggccacctacccaccatcctggagctgggtgagggc
ccaggcagtggggaggaggtccgggaagggacagtaggccaggaggaccctggagggggc
cctgtggcacctgccgaagaccaccatgagggcaaggagactgtagctgcagctcagacg
tga

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_7|196_aa
MLARTPPGLPPAENRTRQHWPRSGAVRRWGTGGGRGGEGGRGRGRGGGGRGGGGGGVAVV
GGGGRGGRGGGRGGVGGGRGGRRRKRRRKRRKKRRKEEKKEEDQEEEEEEEEEEEKEEEE
EEEEKKEEEEEEKEEEEEEKEEEEEEKKEKEEEEEEEEEQKKEEEEEEEEEEKEKEEEEE
EEEEEEAGLDTETHIP

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_7|591_bp
atgttggccagaacccctccagggctccctcctgcagagaacaggactaggcagcactgg
cccagaagtggagcagtaagaaggtggggaacggggggagggagaggaggagaaggagga
agaggaagagggagaggaggaggaggaaggggagggggaggaggaggagtagcagtagta
ggaggaggaggaagaggagggagaggaggaggaagaggaggggtaggaggaggaagagga
ggaaggaggaggaagaggaggaggaagaggaggaagaagaggagaaaggaggagaagaag
gaagaggatcaggaagaggaggaggaggaagaggaggaggaagagaaggaagaggaggag
gaggaagaggagaagaaggaagaggaggaggaagagaaggaagaggaggaggaagagaag
gaagaggaggaggaagagaagaaggaaaaggaggaagaggaggaggaggaagaggagcag
aagaaggaagaggaggaggaagaggaagaagaggagaaggagaaagaagaggaggaggaa
gaggaagaggaggaggaagctggacttgacactgagacacacataccctaa

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_8|141_aa
MAFDTFSIGSVVQEIENPCRRALDPSHLGWEPFSGLCWGSCGSPQNEDSLQWDLGMESTS
LDDVLYRYASFRNLVDPITHDLIISLARYIHCPKPVGWLWSEPARSRGVRWVPFWAEQLY
AQGGLADRPKEDKPVLQAPRA

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_8|426_bp
atggcttttgacacattctcaattgggtctgtggtccaggagatcgagaacccctgcaga
agggcactggaccccagccacctgggctgggagcctttctctgggctgtgctggggcagc
tgtgggagcccccagaatgaggacagcctgcagtgggacctgggcatggagtcgacctcg
ctagacgacgttctgtatcgctacgccagcttccggaacctggtggaccccatcacacac
gacctcatcatcagcctggcacgctacatccactgtcccaagccggtagggtggctgtgg
tccgagccagccaggtcccggggtgtgcggtgggtgcctttctgggcagagcagctgtat
gcccaaggaggactggcagacaggcccaaggaggacaagcccgtcctccaggcaccaaga
gcttga

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_9|150_aa
MGTRQTKGSLAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQE
LLRMVRQGRREEAGTLLQHLRQAEKEAGLRGQSTELSACVMEQQKKASVSLGYTQLSLPS
FASGKVGEWGHENWKWLVAVKKGARLDLIV

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_9|453_bp
atgggcacccggcagaccaagggcagcctggcggagagagccagccccggcgccgcgccg
ggcccccgacgcgaacggccggacttctgggcgtcgctgctgctgcgcgccggggacaag
gcggggcgcgcgggcgcggggatgcccccctaccaccggcgagtcggcatggtccaggag
ctgctgcggatggtgcgccagggccggcgggaggaggcggggacgctgctgcagcacctg
cgccaggcagagaaggaggctggtctccggggacagtcgactgagctgtcggcctgcgtc
atggagcagcagaaaaaggcgtctgtttccctgggatacacccagctgagcctcccatcc
tttgccagcgggaaggtgggggagtggggccatgagaactggaagtggttggtggcggtc
aagaagggtgcccggctcgatttgattgtctga

>gi568815581f:16317669_16536886|GENSCAN_predicted_peptide_10|92_aa
VSERTAPRPRKRRREEPSFRLERDSGTLGGPRNAVFLGNVVHSLRCAGAVALLHTRTAED
PYLRERARTLPGYEKAWRMLRQALPVSVAVLW

>gi568815581f:16317669_16536886|GENSCAN_predicted_CDS_10|279_bp
gtttcagagcggacagctccacggcccagaaagagacgcagggaggagcccagcttccgc
ctcgaaagggactctgggacactgggcgggcccaggaacgcagtgttcttgggaaatgtg
gtccacagcctccgctgcgcaggcgccgtggccctgctccacacgcgcacggctgaagac
ccctatctccgagagcgcgcacgcacccttccggggtacgagaaggcgtggcggatgctg
aggcaggccctaccggtctcggtggcggtgttgtggtga