GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:43:45

Sequence gi568815580r:32312217_32513176 : 200960 bp : 38.81% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    456    451    6                               1.05
 1.05 Term -   6572   6417  156  2  0   48   54    89 0.003  -1.55
 1.04 Intr -  18282  18199   84  0  0   70  103    25 0.041   1.30
 1.03 Intr -  19500  19410   91  2  1   94   89    38 0.061   3.58
 1.02 Intr -  20647  20459  189  0  0  109   40    89 0.061   3.98
 1.01 Init -  29070  28922  149  0  2   83   74    40 0.155   1.71
 1.00 Prom -  32503  32464   40                              -5.45

 2.00 Prom +  35865  35904   40                              -2.95
 2.01 Init +  40110  40192   83  2  2   70   61   149 0.993  10.89
 2.02 Intr +  40468  40567  100  1  1  140  -24    38 0.030  -3.01
 2.03 Intr +  51478  51577  100  0  1  126   84    61 0.915   8.26
 2.04 Intr +  55467  55619  153  1  0    8   94   191 0.907  10.82
 2.05 Intr +  65073  65244  172  1  1   30   57   122 0.114   1.38
 2.06 Term +  71079  71193  115  0  1   75   38   100 0.286   0.76
 2.07 PlyA +  72978  72983    6                               1.05

 3.00 Prom +  83381  83420   40                              -4.75
 3.01 Init +  84268  84694  427  0  1   81   58   335 0.674  26.31
 3.02 Term +  87087  88507 1421  1  2   78   45   443 0.628  29.14
 3.03 PlyA +  89110  89115    6                               1.05

 4.02 PlyA -  89763  89758    6                               1.05
 4.01 Sngl - 100960  99998  963  1  0   83   32  1135 0.724 103.82
 4.00 Prom - 107949 107910   40                              -4.55

 5.00 Prom + 112528 112567   40                              -3.25
 5.01 Init + 123957 124024   68  2  2   67   58    63 0.347   1.80
 5.02 Term + 128460 128631  172  0  1   73   42   184 0.978   8.62
 5.03 PlyA + 128845 128850    6                               1.05

 6.04 PlyA - 129450 129445    6                               1.05
 6.03 Term - 132817 132718  100  0  1   68   49    83 0.009  -0.98
 6.02 Intr - 153290 153086  205  0  1   71  100    59 0.221   2.74
 6.01 Init - 158212 158092  121  1  1   91  113   115 0.426  14.98
 6.00 Prom - 160676 160637   40                              -4.15

 7.03 PlyA - 160846 160841    6                               1.05
 7.02 Term - 172683 172618   66  0  0  108   39   119 0.837   5.96
 7.01 Init - 185109 184729  381  0  0   59   -3   197 0.032   4.62
 7.00 Prom - 187573 187534   40                              -4.05

 8.00 Prom + 193176 193215   40                              -5.45
 8.01 Init + 199976 200316  341  1  2   30   66   267 0.960  15.48
 8.02 Intr + 200341 200450  110  1  2  -36  -48   234 0.043  -3.59
 8.03 Intr + 200628 200815  188  1  2   82   87   268 0.101  24.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  40468  40573  106  1  1  140   49    34 0.893   1.60
S.002 Init + 140886 140984   99  2  0   86   85    72 0.806   7.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_1|222_aa
MDEAGNHHSQQTIARMENQTLHALTHRWELNNENTWTQGGEHHTPGPVMGKESTQASGAQ
TGGTSFKSLETTGSISEASSAKHCTELFSRFTTFNPDSVPSDGVVGDTAGTVWPGVLKGE
PCHLGTCYRCVLDPHPTPSESDTIQGIHVQVCYMSTLHDADVCDTNDPVTHMDTVGLSCH
SISFYLIHKVDCHAEGMADSKTTAAKEGPPQVMLTATGDGEQ

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_1|669_bp
atggatgaagctggaaaccatcattctcagcaaactatcgcaaggatggaaaaccaaaca
ctgcatgctctcactcacaggtgggaattgaacaatgagaacacttggacacagggtggg
gaacatcacacaccggggcctgtcatggggaaagagtccacacaggcttctggggcacag
acaggagggaccagctttaagagcttagaaacaacaggttccatctctgaagcctcaagt
gccaagcactgcactgaactcttctctaggtttactacgtttaatcccgacagtgtcccg
tcagatggtgtggtaggagacacagcagggacagtgtggccaggagttctcaaaggggaa
ccttgtcacctgggaacttgttatagatgcgttcttgatccccatccgacaccttctgaa
tcagacacgattcaggggatacatgtgcaggtttgttatatgagtacattgcatgatgct
gacgtttgtgatacaaatgatcctgtcacccatatggacactgtgggcctcagctgtcat
tccatttctttttatttgatacacaaagtagactgccatgctgaagggatggcagacagt
aaaactacagctgcaaaagagggcccaccgcaggtcatgctgactgccactggtgatggc
gaacagtga

>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_2|240_aa
MHPVASDTWGGKSILPRWPEQGILFLSLTRLRRSQLGTPVITPVKTTPVIMREGKNLHGR
REHWNTVNFLRQSLTAYDFQSSTCKRKGYFEEAQGIQGWQTRFSPNSKQARETHTNHDDH
TKQQGDKEEKPSTFTGGMAVCLREPAIRKKGMNLSLRQASQRTCSKVVPTTWTSQSLCHP
RSSILIGRVRHYPAAKREDSGVSTLNNYRNGSGLTESQHKTSLDSDSQRQVIPSLRNGAE

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_2|723_bp
atgcatcccgtggccagcgacacctggggcggcaagagcatcctgcctcgctggcctgag
cagggaatcctgttcctttcattgaccagattaagaagatcacagctgggaacacctgtg
atcacacctgtgaagaccacacctgtgattatgagagaaggaaagaatctccatggaaga
agggaacactggaacactgtgaactttttgagacaaagccttacagcttatgattttcag
tcatcaacatgtaaaaggaaaggttattttgaagaggctcaagggatacaaggatggcag
acacggttcagtcccaattctaagcaagccagggagacacatacgaaccatgatgaccat
acaaagcaacagggagataaggaggagaagccaagcaccttcacaggagggatggctgtc
tgcctacgggagccagccataaggaagaaggggatgaacttgagtctccgccaggcatca
cagagaacgtgttccaaggtggttcctaccacctggacatctcagagcctgtgtcatcca
aggtctagcattcttattgggcgagtgaggcactacccagctgccaaacgtgaagacagt
ggtgtaagtacactcaacaactacagaaatgggtcagggttaacagaaagccagcacaag
acttccctggatagtgactcacaaaggcaagtgattccaagcctaagaaatggagcagag
tga

>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_3|615_aa
MARELRDECTSFSSRCDQLEERVSVIEDQMNEMKREEKFREKRVKRNEQSLQEIWDYVKR
PNLRLIGVPESDRENGTKVENTVQDIIQENFPNLARPANIQIQEIQRMPQRYSSRRATPR
HITVRFTKAEMKEKMLRAAREKVLEVLARAIRQEKEIKGIQLGKEEVKLSVFTDDMIVYL
ENPIVSAQNLLKLIGNFSKVSGYKINVQKSQAFLYNSNRQTESQLMSEHPFTIASKRIKY
LGIQLRREVKDLFKENYKPLLNEIKQDTNKWKNIPCSWIGRINIVKMAILPKVIYRFNAI
PIKLPMTFFTELEKTTLKFIWNQKRACTVKSILSKKNKAGGITLPDFKLYYKATVTKTAW
YWYQNRDIDQWNRTEPSEIIPHIYNHLLFDKPNKNKQWGKDSLFNKWCWENWLAICRKLK
LDLFLTPYTKINSRWIKDLHVRPKTIKTLEENLGNTIQDTGMGKGFMSKTPKAMATKAKI
DKWDLIKLKSFCTAKETTIRVNRQPTEWEKILTIYSSDKGLISRIYKELKQIYKKKTNNP
INKWVKDMNRHFSKEDIYAANRHMKKCSSSLAIRDMQIKTTIRYHLTPVRMAIIKKSGNN
RCWRGCGEIGTLLHC

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_3|1848_bp
atggcacgagaactacgtgacgaatgcacaagcttcagtagccgatgcgatcaactggaa
gaaagggtatcagtgattgaagatcaaatgaatgaaatgaagcgagaagagaagtttaga
gaaaaaagagtaaaaagaaacgaacaaagcctccaagaaatatgggactatgtgaaaaga
ccaaatctacgtctgattggtgtacctgaaagtgacagggagaatggaaccaaggtggaa
aacactgtgcaggatattatccaggagaacttccccaatctagcaaggccggccaacatt
caaatacaggaaatacagagaatgccacaaagatactcctcgagaagagcaactccaaga
cacataactgtcagattcaccaaagctgaaatgaaggaaaaaatgttaagggcagccaga
gagaaagtgttggaagttctggccagggcaatcaggcaggagaaagaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccgtgtttacagatgacatgattgtatattta
gaaaaccccatcgtctcagcccaaaatctccttaagctgataggcaacttcagcaaagtc
tcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacaacagtaacagacaa
acagagagtcaactcatgagtgaacacccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttagaagggaagtgaaggacctcttcaaggagaactacaaaccactg
ctcaacgaaataaaacaggacacgaacaaatggaagaacattccatgctcatggatagga
agaatcaatatcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcata
tggaaccaaaaaagagcctgcactgtcaagtcaatcctaagcaaaaagaacaaagctgga
ggcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgg
tactggtaccaaaacagagatatagaccaatggaacagaacagagccctcagaaataata
ccacacatctataaccatctgctctttgacaaacctaacaaaaacaagcaatggggaaag
gattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaa
ctggatctcttccttacaccttatacaaaaattaattcaagatggattaaagacttacat
gttagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacaca
ggcatgggcaagggcttcatgtctaaaacaccaaaagcaatggcaactaaagccaaaatt
gacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcaga
gtgaataggcaacctacagaatgggagaaaattcttacaatctactcatctgacaaaggg
ctaatatccagaatctacaaagaactcaaacaaatttacaagaaaaaaacaaacaacccc
atcaacaagtgggtgaaggatatgaacagacatttctcaaaagaagacatttatgcagcc
aacagacacatgaaaaaatgctcatcatcactggccatcagagacatgcaaatcaaaacc
acaataagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaac
aggtgctggagaggatgtggagaaataggaacacttttacactgttga

>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_4|320_aa
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGHGGNFSGRGGFGGSRAGGRYGGS
GDGSNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRNSGPYGGGGQYFAKPR
NQGGYGGSSSSSSCVSGRRF

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_4|963_bp
atgtctaagtcagagtctcctaaagagcccgaacagctgaggaagctcttcattggaggg
ttgagctttgaaacaactgatgagagcctgaggagccattttgagcaatggggaacgctc
acggactgtgtggtaatgagagatccaaacaccaagcgctccaggggctttgggtttgtc
acatatgccactgtggaggaggtggatgcagctatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagagctgtctccagagaagattctcaaagaccaggtgcc
cacttaactgtgaaaaagatatttgttggtggcattaaagaagacactgaagaacatcac
ctaagagattattttgaacagtatggaaaaattgaagtgattgaaatcatgactgaccga
ggcagtggcaagaaaaggggctttgcctttgtaacctttgacgaccatgactccgtggat
aagattgtcattcagaaataccatactgtgaatggccacaactgtgaagttagaaaagcc
ctgtcaaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggtttcggtgggaatgacaacttcggtcatggagga
aacttcagtggtcgtggtggctttggtggcagccgtgctggtggtagatatggtggcagt
ggggatggctctaatggatttggtaatgatggaagcaattttggaggtggtggaagctac
aatgattttggcaattacaacaatcagtcttcaaattttggacccatgaagggaggaaat
tttggaggcagaaactctggcccctatggcggtggaggccagtactttgcaaaaccacga
aaccaaggtggctatggcggttccagcagcagcagtagctgtgtcagtggcagaagattt
taa

>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_5|79_aa
MEEVLDERSPHKNFRVGEIRKGITYRMSVSSLEENSVDNSGIPKKCCINNALDGTEDHIV
WKYMDICSCVEKQRRRTQL

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_5|240_bp
atggaagaggttttagatgagcgctctcctcacaagaatttcagagttggggaaatacga
aaagggataacttacagaatgagtgtcagtagcttggaagaaaattctgtagacaacagt
ggcattcctaagaaatgctgtatcaacaatgctcttgatggcacagaggaccatattgtg
tggaaatacatggacatctgcagctgcgtggaaaagcaacgcagaagaactcaactgtga

>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_6|141_aa
MDPAPSLGCSLKDVKWSSVAVPLDLLVSTYRLPQIARLDNGIRSDSKSRMCWDCGKFGPY
FVLRGFCSFIIYWPLGAKTWTLRPQGGSKWLFVNIRGLSRIHVLSLKLKCSGISGHGQIH
TDGWEGRQDTLQEGSIAYAES

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_6|426_bp
atggacccggcgccctcgctgggctgcagcctcaaggatgtgaagtggagctcggtggcc
gtgccgctcgacctcctggtcagcacttaccggctgccccagatcgcgcgcctggacaac
ggaatcagatcagattctaagtcccggatgtgttgggactgtgggaaatttggtccttac
tttgtgctcagaggcttctgcagctttatcatttactggcctctaggagcaaaaacatgg
acacttaggccccagggaggctccaagtggctgtttgtaaacatcagaggtctttctcgg
atccatgttttatcattgaaattgaagtgttctgggatctcaggtcatggacagatccat
actgatggttgggaagggaggcaggatacgctacaagaaggaagtattgcctatgctgag
tcttga

>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_7|148_aa
MIISIDTEKAFNKIQHCFMIKTLSKIGIEGTYLSVIKAIYDKLTANIILNGEKLKAFPVR
MGTRQRCPLSSLLFNIVLEVLARAIRQEKKIKGIQIGKEEIKLSLIADDMIIYLENAKDF
SRRLLELPTQCEDDEDKGFYDDPLPLNE

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_7|447_bp
atgatcatctcaatagatacagaaaaagcattcaacaaaatccagcattgctttatgatt
aaaactctcagcaaaattggcatagaagggacatacctcagtgtaataaaagccatatat
gacaaactcacagccaacataatactgaatggggaaaaattgaaagcattccctgtgaga
atgggaacaagacaaagatgcccactctcatcactcctcttcaacatagtactggaagtc
ctagccagagcaatcagacaagagaaaaaaataaaaggcatccaaatcggtaaagaggaa
atcaaactgtcactgattgctgatgatatgatcatttaccttgaaaacgctaaagacttc
tccagaaggctcctggaactacctactcaatgtgaagatgatgaggacaaaggcttttat
gatgatccacttccacttaatgaatag

>gi568815580r:32312217_32513176|GENSCAN_predicted_peptide_8|213_aa
MNRRGLNQYLNAVENAQHVEVESIPLPDMPHASSNILIQEIPLPGAQPPSILKKPSACGP
PTQAVSILLFLGRGVPHLPPGRKPLGPPPGPPPPQVVQMYGRKVGVALDLPPPSPEIAQR
GHDDDVFSTSEDDGYPEDVDQDKHDDSTDDSQEIPEEGREVEEFSEDNDEDDSDDSKAEK
QSQKHNQEELHSDGTSTASSQQQAPRQSVPPSQ

>gi568815580r:32312217_32513176|GENSCAN_predicted_CDS_8|639_bp
atgaacagaagaggactcaaccaatatttgaatgctgtcgagaatgcccagcacgtggaa
gtggagagtattcctttaccagatatgccacatgcttcttctaacattttgatccaggaa
attccacttcctggtgcccagccaccctccatccttaagaaaccctcagcctgtggacct
ccaactcaggcagtttctatccttctcttcttgggacgtggtgttccacatttgcctcct
ggcagaaaacctcttggccctccccctggtccaccccctcctcaagtcgtgcagatgtat
ggccgtaaagtgggtgttgccctagatcttccccctcctagtcctgaaattgcccagcga
ggtcatgatgatgatgtttttagcaccagtgaagatgatggctatcctgaggacgtggat
caagataagcatgatgacagtactgatgacagtcaagaaatccctgaggagggacgggaa
gtagaggaattttcagaggacaatgatgaagatgattctgatgactctaaagcagaaaaa
caatcacaaaaacacaatcaagaggaactgcattctgatggcacatccactgcttcttca
cagcagcaggctccccggcagtctgttcctccttctcag