GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:20:34

Sequence gi568815580f:31918864_32168381 : 249518 bp : 42.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -  12660  12466  195  1  0   78   68   183 0.354  13.76
 1.01 Init -  23901  23577  325  0  1  103   56   170 0.053  12.84
 1.00 Prom -  29423  29384   40                              -4.55

 2.00 Prom +  33410  33449   40                              -4.65
 2.01 Init +  43315  43721  407  0  2   90   60   378 0.885  31.31
 2.02 Intr +  43873  44246  374  1  2    1   14   360 0.852  13.68
 2.03 Term +  44320  44816  497  2  2   33   52   283 0.970  12.94
 2.04 PlyA +  45412  45417    6                               1.05

 3.00 Prom +  46739  46778   40                              -8.75
 3.01 Sngl +  48118  48507  390  0  0   17   42   574 0.957  41.67
 3.02 PlyA +  49435  49440    6                               1.05

 4.04 PlyA -  51303  51298    6                               1.05
 4.03 Term -  55874  55567  308  0  2   66   36   162 0.237   3.09
 4.02 Intr -  59435  59181  255  0  0   46   64   197 0.454   9.59
 4.01 Init -  59734  59674   61  1  1   55  116    44 0.208   5.37
 4.00 Prom -  71326  71287   40                              -3.15

 5.00 Prom +  75147  75186   40                              -7.45
 5.01 Init +  82168  82225   58  0  1   42  114    23 0.918   1.82
 5.02 Intr +  83060  83235  176  0  2  135   50    27 0.883   2.34
 5.03 Intr +  83429  83536  108  1  0   12   80   120 0.866   3.16
 5.04 Intr +  84210  84291   82  2  1   61  110   127 0.958  10.49
 5.05 Intr +  85808  85974  167  0  2   51   65    82 0.379   0.96
 5.06 Term +  87405  87464   60  2  0  102   45    37 0.337  -2.37
 5.07 PlyA +  89153  89158    6                               1.05

 6.00 Prom +  92348  92387   40                              -6.65
 6.01 Init + 100001 100164  164  1  2   85   86   260 0.996  22.75
 6.02 Term + 100403 100997  595  2  1   57   37   190 0.765   3.81
 6.03 PlyA + 102186 102191    6                               1.05

 7.05 PlyA - 103288 103283    6                               1.05
 7.04 Term - 108291 108218   74  1  2   96   29    30 0.282  -5.01
 7.03 Intr - 108809 108760   50  1  2   66   92    94 0.435   5.01
 7.02 Intr - 115508 115435   74  2  2   83   67   115 0.482   6.19
 7.01 Init - 119037 118843  195  0  0   42   52   127 0.093   2.64
 7.00 Prom - 122509 122470   40                              -2.65

 8.04 PlyA - 122568 122563    6                               1.05
 8.03 Term - 129991 129702  290  2  2   77   38   102 0.927  -1.35
 8.02 Intr - 130353 130237  117  1  0   71   86   167 0.512  14.32
 8.01 Init - 136596 136587   10  0  1   73   74     3 0.288  -1.85
 8.00 Prom - 140555 140516   40                              -3.05

 9.00 Prom + 143758 143797   40                              -4.15
 9.01 Init + 144072 144125   54  2  0   56   90    48 0.757   1.13
 9.02 Intr + 147039 147146  108  2  0   93   92   107 0.997  11.16
 9.03 Term + 149435 149521   87  1  0   85   28   101 0.972   0.48
 9.04 PlyA + 150633 150638    6                               1.05

10.02 PlyA - 150889 150884    6                               1.05
10.01 Sngl - 157409 157197  213  2  0   90   40   231 0.996  13.43
10.00 Prom - 160170 160131   40                              -6.95

11.03 PlyA - 163559 163554    6                               1.05
11.02 Term - 173315 173042  274  1  1   73   45   163 0.172   4.46
11.01 Init - 173915 173866   50  2  2  101   51    64 0.312   4.50
11.00 Prom - 188974 188935   40                              -6.05

12.00 Prom + 189304 189343   40                              -5.75
12.01 Init + 192919 193056  138  0  0   61   80    58 0.774   2.49
12.02 Intr + 194882 194997  116  1  2   56  115    58 0.769   3.63
12.03 Intr + 204655 204711   57  1  0   71  121    44 0.606   3.08
12.04 Intr + 221383 221585  203  1  2   20    9   262 0.361   9.51
12.05 Term + 221920 222095  176  2  2  -17   44   202 0.590   2.24
12.06 PlyA + 223351 223356    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_1|174_aa
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEGMWYPPFS
SGLPQSRGREKEVAGGQGREGQCLRPGAGTVASGAVAPRCSGGGWRRDLHMRDPNNQLHV
IKNLKIAVSNIVTQPPQPGAIRKLLNDVVSGSQPAEGLVANVITAGDYDLNISX

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_1|522_bp
atggcccagtgtgtacaatcagtgcaggagctaatcccggactccttcgtcccctgtgtc
gctgcgctgtgcagcgacgaagccgagcggctcactcgtctcaatcacctcagcttcgcg
gagctgcttaagcccttctcccgcctcacttccgagggtatgtggtatcctcccttttcc
agtgggctcccgcaaagccgtggtcgggagaaggaagttgcgggcgggcagggaagagaa
gggcagtgtttacgtcctggagccggtaccgtggcgtctggggctgtggccccgcggtgc
tccgggggcggctggaggagggaccttcacatgagagatcctaataatcaacttcacgta
attaaaaatttgaagatagcagtaagcaacattgtcacccagccacctcagcctggagcc
atccggaagcttttgaatgatgttgtttctggcagtcagcctgcagaaggattagtagct
aatgtgattacagcaggagattatgaccttaacatcagtgnn

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_2|425_aa
MAQADIVLIRLAVMGQNLILTMKDHGFVVCAFNRTVSEVDDFLANEAKGTKVVGAQSLKE
MVSKLKKPQRIILLVKAGQAVDYFIKKLIPLLDIGDIIIDGGNSEYRDTTRRCQDLKAKG
ILFVGSGVSGGEEGAWIEYGDMQLICEAYHLMKDVLGMAQDKMAQAFEDWNKTELDSFLI
EITANILKFQGADGKHLLPKIRDSAGQKGMGKWTTISALEYGIPVTLIGEAVFAWCLSSL
KDGRIQASKKLKGPQKFQFDGFMLLRQGATEFGWTLNYGDIALMWRGGCIIRSVFLGKIK
DAFDRNPEPQNLLLDDFLSQLLKTTRTLGGGQSALGSRLAFPCPVLSLPSPSMTSTDTRC
FQPTSSRLSGIPLGLTPMNSWPNQGSLSTPTGQATVAVYHPRHTMPDDDDAAPVTLHDST
DQDIP

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_2|1278_bp
atggcccaagctgacatcgtgctgatcagattggcagtcatgggccagaacttaattctg
accatgaaagaccatggctttgtggtctgtgcttttaataggactgtctccgaagtggat
gatttcttggccaatgaggcaaagggaaccaaagtggtgggtgcccagtccctgaaagag
atggtctccaagctgaagaagccccagcggatcatcctcctggtgaaggctgggcaagct
gtggattatttcatcaaaaaactgataccattgttggacattggtgacatcatcattgat
ggaggaaattctgaatatagggacaccacaagacggtgccaagacctcaaggccaaggga
attttatttgtggggagcggagtcagtggtggagaggaaggggcctggatagagtatggg
gacatgcagctgatctgtgaggcataccacctgatgaaagacgtgctgggcatggcacag
gacaagatggcccaggcctttgaggattggaataagacagagctagactcattcctgatt
gaaatcacagccaatattctcaagttccaaggtgctgatggcaaacacttgctgccaaag
atcagggacagtgcagggcagaagggcatggggaagtggaccaccatctctgccctggag
tatggcatacccgtcaccctcattggagaagccgtctttgcttggtgcctgtcatctctg
aaggatgggagaattcaagctagcaaaaagctgaagggtccccaaaagttccagtttgat
ggctttatgctgctaaggcagggagccaccgagtttggctggaccctcaattatggtgat
attgccctgatgtggagagggggctgcattattagaagtgtattcctaggaaagataaag
gatgcgtttgatcgaaacccagaacctcagaacctcctactggacgacttcttaagtcag
ctgttgaaaaccactaggactcttggtggtgggcagtcagcactggggtccaggctggca
ttcccatgccctgttttgtcactgccctctccttctatgacaagtacagacacgagatgc
ttccagccaacctcatccaggctcagcgggattcctttggggctcacacctatgaactct
tggccaaaccagggcagtttatccacaccaactggacaggccacggtggcagtgtatcat
cctcgtcatacaatgcctgatgatgatgatgctgctcctgtcaccctccacgattccaca
gaccaggacattccatga

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_3|129_aa
MKNIVKNYSEAEIKVQEATSNDPWGPSSSLMTEIADLTYNMVAFSGIMSMMWKRLNDHSK
NWQHVYKELLLLDYPIKTGSECMAQQCREIIFAIQTLKDFQYIDQDGKDQGINVHEKSKQ
LVALLKDEE

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_3|390_bp
atgaaaaacattgtgaaaaattactcagaggcagaaatcaaagtccaggaggccacctcc
aatgacccatggggcccatccagctctctgatgaccgagattgcagacctgacctacaac
atggtggccttctcggggatcatgagcatgatgtggaagcggctcaatgaccatagcaag
aactggcagcatgtgtacaaggagctgctgctgctggactaccccatcaagacaggctcc
gagtgcatggcccagcagtgccgtgagatcatctttgccatccagaccctgaaggacttc
cagtacattgaccaagatggcaaggaccagggcatcaacgtgcatgagaagtcaaagcaa
ctggtggccctcctcaaagatgaggaatga

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_4|207_aa
MWAERILTYCSNQVTLCTDQGSKSETNSSEKNRVLTSKQSTRVWDPVDHLPLLNAPDPNF
PPPQTATTAPDPSLTHVVPPPYDPDFWELSLHEPAPKYPSLKGFQRCCIIPCIHGLVQRL
IETALTKTFNSPPPYSDKLLLLENQAEQQSQDMLKSLKRKNYENQEGEVVGNIEFLFKDP
LSSIFKAYLPCLLAPSYGKKFPAIPNL

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_4|624_bp
atgtgggcagaaaggatcctcacatactgcagcaaccaggtaactctgtgcacagaccaa
ggaagtaagtcagaaaccaactcctcagaaaagaatagggtccttacctccaaacagtcc
accagagtatgggatcctgtagaccaccttcccctgcttaatgcccctgatcctaacttc
cctccccctcagacagccactactgccccagatccttcccttactcacgttgttcctcct
ccttatgaccctgacttttgggaactatcattgcatgagcctgctcctaagtacccttcc
ctaaaaggatttcaacgatgctgcatcataccctgtattcatggattggtgcagagactt
atagaaacagctctcaccaaaacctttaattctcccccaccttactcagataaactccta
cttttagaaaaccaagcagaacagcagagtcaagacatgttaaagagtttgaagaggaag
aattatgaaaatcaagagggggaagtagtaggaaacattgagttcctcttcaaagatcca
ttgtcctctattttcaaagcctatcttccttgcctccttgcccctagttatggtaaaaaa
tttccagccattcccaatctgtaa

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_5|216_aa
MTSGPQTNQPKEHLTNFKSGCCQVPVLPQPLLPNPIILLSPPLPTPRPGLQFRFATSPPP
PAQQFPLGEVAGAEGIVRPNLTLTTAGFMSQTSRKALEQFPEKIPNGTIRQIPQWLKTDA
ARSPWKPPRPSRMLWVTLTVEERNFLTMQGSSSIINTSLIKTLLKAALLPKEAGVIHCKG
HQKASDPITQGNTYADKGHLRQFIVINQNATRWILA

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_5|651_bp
atgacctcgggtcctcagaccaaccaacccaaggaacatctcaccaatttcaaatcgggc
tgctgccaggtcccggttcttcctcagcctctgctccccaatcctataatccttctatca
cctcccctcccaacacccaggcctggcttacagtttcgttttgcgactagccctccccca
cctgcccaacaatttcctcttggagaggtggctggagctgaaggcatagtcaggcccaat
ctcacactgacaaccgccggcttcatgagccagacctccaggaaggcattagagcagttc
cctgagaagatccccaatggaactatcaggcagattccccagtggctgaagactgacgct
gcccgatcgccttggaagccccctagaccatcacggatgctttgggtaactctcacagtg
gaggaaagaaatttcctcactatgcaagggtcctcctccatcattaacacttctttaata
aaaactcttctcaaagccgctttacttccaaaggaagctggagtcattcactgcaagggc
catcagaaggcatcagatcccatcactcagggcaacacttatgctgataagggacacctg
agacagttcatagtaatcaatcaaaatgctacccgttggatattggcttga

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_6|252_aa
MGSVLSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVSRSPG
AELQRRGSRHGSRPEPGLANWGGCSWLENQRSPRHGKETSSSYKAGAPAKRSYPAEHGRT
GCASLCPRNPGPFCFAGAVHVFPECPQRLVLSKQGSVQSVFPPPPLLPFPNTDTQPLKGQ
VKLELPSDFPQLLEFNNLLGWGLDVSRQAPECTPSKPSHNVTGGGRLPALRTVSPNRRKL
QSKITFSKPHST

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_6|759_bp
atgggctccgtgctgagcaccgacagcggcaaatcggcgcccgcctctgccaccgcgcgg
gccctggagcgcaggagggacccggagttgcccgtcacgtccttcgactgcgccgtgtgc
cttgaggtgttacaccagcctgtccggacccgctgtggccacgtctcccgaagcccaggt
gcggaactccagagaaggggatccaggcacgggtcccgcccagagccagggctcgccaac
tggggagggtgctcttggctggagaaccagcgctcgcccaggcacggaaaggaaacgagc
tccagctacaaggcaggggctcccgcaaagcgcagttaccccgctgaacacggtagaacg
ggctgcgcttccctctgccccagaaacccgggtccgttttgttttgctggagctgtgcac
gtgttcccagaatgcccacagaggctcgtcttaagcaaacaaggatctgtgcaaagtgtc
tttccacccccacccctgctaccctttcccaacacagacacccagcccctcaaagggcaa
gtcaaactggagcttccgagtgactttccacagttgttagagtttaacaacctgctaggg
tggggcttggacgttagccgccaagcccctgaatgtactccttcaaaacccagccacaac
gtaacaggaggtggcaggctacctgctttacgcacggtctctccaaaccggcggaaatta
cagagtaaaataactttctcaaaaccgcatagtacttag

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_7|130_aa
MFRFCPIRVQFFQSSLRLATFRILLIGAFYRVLIGALYRALIDAFYRALIGAFYRALIGV
FYNPLGLCPAAAAALLKRKTERDAKEITPRANEWDLGTTDEKPAKKGNKTPGDVNPLTQE
GKIKEILGKN

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_7|393_bp
atgttccgtttctgtcctatcagagtgcagtttttccaatcctccctgcgattggctact
ttcagaatcctgctgattggtgcgttttacagagtgctgattggtgcactttacagagca
ctgattgatgcgttttacagagcactgattggtgcattttacagagcgctaattggtgtg
ttttacaatcctcttggcttatgtcccgctgcagctgccgccctgctcaagagaaagact
gagcgggatgctaaggagataacgccaagagccaatgaatgggatcttggaacaacggat
gaaaagccagcaaagaaagggaacaagaccccaggagatgtaaatcctttaactcaggaa
ggaaaaataaaagaaatacttggaaaaaattag

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_8|138_aa
MCNCQLSSMTLKTCKIMEDLASWATFNLGQTEQHVDWISAGAAPQGPIVKQLPSPVPPTE
QLEQEKPVTIGSAPSTPNKLLLSHSNCQLPRPLRSITNISACFSLELAIDHRGFPHSPGA
RSLYSNSVFVTYQLCDLV

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_8|417_bp
atgtgcaactgtcagctgtcttcaatgaccctgaagacctgtaaaatcatggaggaccta
gcttcatgggccaccttcaatttgggccaaactgagcagcatgtggactggatttctgct
ggagcagctccccagggacctattgtgaaacaactccctagcccagttcctcctacagag
caacttgagcaggaaaagcccgtgaccatcggctctgctccctcaacacctaacaagctc
ctacttagccattccaattgccaactccctaggccattaagatcaataacaaatatctct
gcatgcttttctcttgaacttgctatagaccacaggggtttcccacacagccctggagct
agatcactgtattcaaattctgtctttgttacttaccagctgtgtgaccttgtatga

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_9|82_aa
MGRVGWLMLVIPALWEAEFCPLCRLIPDENPSSFSGSLIRHLQVSHTLFYDDFIDFNIIE
EALIRRVLDRSLLEYVNHSNTT

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_9|249_bp
atgggccgggtggggtggctcatgcttgtaatcccagcactttgggaggcagagttctgt
ccactttgccgtttaatacccgatgagaatccaagcagcttcagtggcagtttaataaga
catctgcaagttagtcacactttgttttatgatgatttcatagattttaatataattgag
gaagctcttatccgaagagtcttagaccggtcacttcttgaatatgtgaatcactcgaac
accacataa

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_10|70_aa
MVRINVLADALKSINNAKKRGKHQVLIGPCSKVIIRFLTVIMKHGYIGESEIIDDQSWED
CEPHRQAKQV

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_10|213_bp
atggtgcgcataaatgtcctggctgatgctctcaagagcatcaacaatgccaaaaagaga
ggcaaacaccaggttcttattgggccatgctccaaagtcatcatccggtttctaactgtg
ataatgaagcatggttacattggcgagtctgaaatcattgatgatcagagctgggaagat
tgtgaacctcacaggcaggctaaacaagtgtag

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_11|107_aa
MAGDGETRRWRQRQRPRDPAQRFPRASCPAAAIFAAEAPGQMEGGVRCAYRPLTGPEPRL
MVQGDSPAAASSSVLALRCLQPTRPSPNAGAPGIWAEEPGEAGRHGV

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_11|324_bp
atggcgggggatggggaaacaaggcgatggcgacagcggcagcggccgagagacccggcc
cagcgctttcctcgagcttcctgtccggccgccgctatcttcgcagccgaggccccgggg
caaatggagggcggcgtgcgctgtgcttatcggcccctaacggggccggagccgaggctc
atggtgcagggagattcgcccgccgccgccagcagctctgtcttggcattgcgctgccta
cagcctacccggccgtcaccgaacgcgggagcgccggggatctgggcggaggagccagga
gaggcggggaggcacggggtgtga

>gi568815580f:31918864_32168381|GENSCAN_predicted_peptide_12|229_aa
MRESGAHCPLCRGNVTRRERACPERALDLENIMRKFSGSCRCCAKQIKFYRMRHHYKSCK
KYQDEYGVSSIIPNFQISQDSVGNSNRSETSTSDNTETYQENTRPLRDPLGEASWAPESG
GDLENLYVYLRDCKHTNQHPVSSSGIVNTPIGTLYLAQGLQTPISILRLAQEASKTTNPP
EGRNSEHIRTSERTNSRRATLRAVTLTARVRSFILEVSETKNPPIPDTA

>gi568815580f:31918864_32168381|GENSCAN_predicted_CDS_12|690_bp
atgagggaaagcggagcacattgtcccctatgtcgtggaaatgtgactagaagagagaga
gcatgtcctgaacgggccttagaccttgaaaatataatgaggaagttttctggtagctgc
agatgctgtgcaaaacagattaaattctatcgcatgagacatcattacaaatcttgtaag
aagtatcaggatgaatatggtgtttcttctatcattccaaactttcagatctctcaagat
tcagtagggaacagcaataggagtgaaacatccacatctgataacacagaaacttaccaa
gagaatacaaggcccctgcgggatccactgggtgaagccagctgggctcctgagtctggt
ggggacctggagaacctttatgtctatctcagggattgtaaacacaccaatcagcaccct
gtgtctagctcagggattgtaaatacaccaatcggcactctgtatctagctcaaggtttg
caaacaccaatcagcatcctgcgtctagctcaggaagccagcaagaccacgaacccacca
gaaggaagaaactccgaacacatccgaacatcagaaagaacaaactccagacgcgccacc
ttaagagctgtaacactcactgcgagggtccgcagcttcattcttgaagtcagtgagacc
aagaacccaccaattcctgacacagcatga