GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:17:44

Sequence gi568815579f:35359929_35472395 : 112467 bp : 47.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1525   1605   81  0  0   86   91    57 0.320   4.79
 1.02 Term +   3734   3796   63  1  0  124   46    26 0.330  -0.11
 1.03 PlyA +   5043   5048    6                               1.05

 2.00 Prom +  10279  10318   40                              -3.66
 2.01 Sngl +  11432  12472 1041  1  0  104   42  1428 0.994 136.94
 2.02 PlyA +  12951  12956    6                               1.05

 3.00 Prom +  21571  21610   40                              -1.86
 3.01 Init +  22244  22407  164  1  2   86   82   184 0.988  16.80
 3.02 Intr +  22991  23121  131  2  2  -17   30   127 0.438  -3.26
 3.03 Intr +  23477  23794  318  0  0  -17   34   293 0.233   9.33
 3.04 Term +  23823  24127  305  1  2   43   42   269 0.589  13.13
 3.05 PlyA +  26130  26135    6                               1.05

 4.00 Prom +  29277  29316   40                              -4.46
 4.01 Init +  41048  41189  142  1  1   75   89    50 0.597   3.82
 4.02 Intr +  47796  47990  195  1  0   36   38   305 0.031  19.69
 4.03 Term +  63050  63312  263  0  2   70   38   141 0.076   2.99
 4.04 PlyA +  63331  63336    6                               1.05

 5.00 Prom +  75240  75279   40                              -5.26
 5.01 Init +  84927  85004   78  2  0   65   76    62 0.544   3.76
 5.02 Intr +  89195  89232   38  1  2   89   81    26 0.547  -0.94
 5.03 Term +  89786  90779  994  2  1  150   43  1394 0.685 132.65
 5.04 PlyA +  91817  91822    6                               1.05

 6.00 Prom + 105818 105857   40                              -3.66
 6.01 Init + 110506 110585   80  0  2   23  100   119 0.167   7.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  47796  48022  227  1  2   36   46   344 0.936  21.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:35359929_35472395|GENSCAN_predicted_peptide_1|47_aa
MSCLSVPRLTCPSPGHSALVAAKKLMQSLRNQEAFFLWDPRVKSYLL

>gi568815579f:35359929_35472395|GENSCAN_predicted_CDS_1|144_bp
atgagctgtctctctgtcccacggctcacctgtccatccccagggcactcagccctggtg
gctgcaaagaagttgatgcagagtctcagaaatcaagaagctttcttcctctgggaccca
cgcgtgaagtcctatctcctgtga

>gi568815579f:35359929_35472395|GENSCAN_predicted_peptide_2|346_aa
MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLRCRPVAVDVLLLNLTAS
DLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHP
LWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFWKDQLAI
LLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHRRQRRVAGLVAATLLNFLVCFGP
YNVSHVVGYICGESPVWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQ
WQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAEN

>gi568815579f:35359929_35472395|GENSCAN_predicted_CDS_2|1041_bp
atggatacaggccccgaccagtcctacttctccggcaatcactggttcgtcttctcggtg
taccttctcactttcctggtggggctccccctcaacctgctggccctggtggtcttcgtg
ggcaagctgcggtgccgcccggtggccgtggacgtgctcctgctcaacctgaccgcctcg
gacctgctcctgctgctgttcctgcctttccgcatggtggaggcagccaatggcatgcac
tggcccctgcccttcatcctctgcccactctctggattcatcttcttcaccaccatctat
ctcaccgccctcttcctggcagctgtgagcattgaacgcttcctgagtgtggcccaccca
ctgtggtacaagacccggccgaggctggggcaggcaggtctggtgagtgtggcctgctgg
ctgttggcctctgctcactgcagcgtggtctacgtcatagaattctcaggggacatctcc
cacagccagggcaccaatgggacctgctacctggagttctggaaggaccagctagccatc
ctcctgcccgtgcggctggagatggctgtggtcctctttgtggtcccgctgatcatcacc
agctactgctacagccgcctggtgtggatcctcggcagagggggcagccaccgccggcag
aggagggtggcggggctggtggcggccacgctgctcaacttccttgtctgctttgggccc
tacaacgtgtcccatgtcgtgggctatatctgcggtgaaagcccggtgtggaggatctac
gtgacgcttctcagcaccctgaactcctgtgtcgacccctttgtctactacttctcctcc
tccgggttccaagccgactttcatgagctgctgaggaggttgtgtgggctctggggccag
tggcagcaggagagcagcatggagctgaaggagcagaagggaggggaggagcagagagcg
gaccgaccagctgaaagaaagaccagtgaacactcacagggctgtggaactggtggccag
gtggcctgtgctgaaaactag

>gi568815579f:35359929_35472395|GENSCAN_predicted_peptide_3|305_aa
MGKEKTHINIVVNGHIDSGKSTSTGHLIYKCGGINKRSIKKFEKKAAEMGKGSFKSFVCD
SSWYIPGHRDFITNIFTGTSQADCAVLVVAAGVGEFEAALLLQDVYKIGGIGTVPDGQVE
TVALKPGVVITFAPVNTTTEVKSVKMHHEALSEAFSGDNVGFHVKNVSVKDIHCSNNAGN
CKNDPPMEAAGFTAQVIYPEPSRPNCHMAHIACKFAELKEKIDRSSGKKLEDGPKFLKSG
DVAIIDMVPGKPMCVESFSDYPPLGCFAACDMRQTVALGVIKAADKKAAGAGKVTKYPQK
AQKAK

>gi568815579f:35359929_35472395|GENSCAN_predicted_CDS_3|918_bp
atgggaaaggagaagactcatatcaacattgtcgtcaatggacacatagattcgggcaag
tccacctctactggccatctgatctacaaatgtggtggcatcaacaaaagaagcattaag
aaatttgagaagaaggctgctgagatgggaaagggctccttcaagagttttgtctgtgac
tcgtcctggtatatcccaggacacagagacttcatcacaaacatctttacagggacatct
caggctgactgtgctgtcctggttgttgctgctggtgttggtgaatttgaagctgccctg
cttctccaggatgtctacaaaattggtggtattggtactgttcctgatggccaagtggag
actgttgctctcaaacctggtgtggtgatcacctttgctccagtcaacactacaactgaa
gtaaaatctgtcaaaatgcaccatgaagctttgagtgaagctttttctggggacaatgtg
ggcttccatgtcaagaatgtgtctgtcaaggatattcattgtagtaacaatgctggtaac
tgcaaaaatgacccaccaatggaagcagctggattcactgctcaggtgatctatcctgaa
ccatccaggccaaattgccacatggctcacattgcatgcaagtttgctgagctgaaggaa
aagattgatcgctcttctggtaaaaagctggaagacggccctaaattcttgaaatctggt
gatgttgccatcattgatatggttcctggtaagcccatgtgtgttgagagcttctcagac
tatccacctctgggttgctttgctgcttgtgatatgagacagacagttgcactgggtgtc
atcaaagcagcggacaagaaggcagctggagctggcaaggtcaccaagtatccccagaaa
gctcagaaggctaaatga

>gi568815579f:35359929_35472395|GENSCAN_predicted_peptide_4|199_aa
MGATQEVLAEWVWRRMAILMPCFFPLNSTCQGLIYIGIRGPASFFVTVFTKKMMRYARGL
RICYENVPQEQLAVVLQLELCLELFFTPMAVTTFCHWHFVQIMLSGPKWGPGGIWGKKDT
PLSRDMDTCSHPNLPVIHSFINCSRPGLVQAAENVLVNKTGSGSSREVRVLEKHRCWRNS
GWTFSGLEFGLPTKEMHFR

>gi568815579f:35359929_35472395|GENSCAN_predicted_CDS_4|600_bp
atgggggctactcaggaagtcctcgctgaatgggtgtggagacgcatggccatcctcatg
ccttgcttttttccgctgaacagtacatgtcagggcctgatctacattggcatacgtgga
cctgcctcgttctttgtaacagtttttaccaagaagatgatgagatatgccagagggctc
cgtatctgctatgagaacgtcccccaagagcagctggccgtggtgctgcagctggagctg
tgcttggagctcttcttcacccccatggcggtcaccaccttctgccactggcactttgtg
cagatcatgctctctggccccaagtggggacctggagggatttggggaaaaaaagacact
cccttgtccagagacatggacacctgctcgcatcccaatttgcctgtcattcactccttc
atcaactgctcccggccaggacttgttcaagctgctgagaatgttttggtgaacaagaca
ggaagcggcagctctcgtgaagttcgcgttctggaaaagcaccggtgttggaggaacagc
ggttggaccttttccggcctggaatttgggctccccacaaaggagatgcactttagatga

>gi568815579f:35359929_35472395|GENSCAN_predicted_peptide_5|369_aa
MADGKHDTFTEVENGPAQTAKREKSDRVPEFGVGQERTRMLPDWKSSLILMAYIIIFLTG
LPANLLALRAFVGRIRQPQPAPVHILLLSLTLADLLLLLLLPFKIIEAASNFRWYLPKVV
CALTSFGFYSSIYCSTWLLAGISIERYLGVAFPVQYKLSRRPLYGVIAALVAWVMSFGHC
TIVIIVQYLNTTEQVRSGNEITCYENFTDNQLDVVLPVRLELCLVLFFIPMAVTIFCYWR
FVWIMLSQPLVGAQRRRRAVGLAVVTLLNFLVCFGPYNVSHLVGYHQRKSPWWRSIAVVF
SSLNASLDPLLFYFSSSVVRRAFGRGLQVLRNQGSSLLGRRGKDTAEGTNEDRGVGQGEG
MPSSDFTTE

>gi568815579f:35359929_35472395|GENSCAN_predicted_CDS_5|1110_bp
atggcagatggaaaacatgacacattcacagaagtggaaaatggccctgcccagacagca
aagagagagaagagtgatagagtcccagagtttggtgttggacaggagaggacaaggatg
ctgccggactggaagagctccttgatcctcatggcttacatcatcatcttcctcactggc
ctccctgccaacctcctggccctgcgggcctttgtggggcggatccgccagccccagcct
gcacctgtgcacatcctcctgctgagcctgacgctggccgacctcctcctgctgctgctg
ctgcccttcaagatcatcgaggctgcgtcgaacttccgctggtacctgcccaaggtcgtc
tgcgccctcacgagttttggcttctacagcagcatctactgcagcacgtggctcctggcg
ggcatcagcatcgagcgctacctgggagtggctttccccgtgcagtacaagctctcccgc
cggcctctgtatggagtgattgcagctctggtggcctgggttatgtcctttggtcactgc
accatcgtgatcatcgttcaatacttgaacacgactgagcaggtcagaagtggcaatgaa
attacctgctacgagaacttcaccgataaccagttggacgtggtgctgcccgtgcggctg
gagctgtgcctggtgctcttcttcatccccatggcagtcaccatcttctgctactggcgt
tttgtgtggatcatgctctcccagccccttgtgggggcccagaggcggcgccgagccgtg
gggctggctgtggtgacgctgctcaatttcctggtgtgcttcggaccttacaacgtgtcc
cacctggtggggtatcaccagagaaaaagcccctggtggcggtcaatagccgtggtgttc
agttcactcaacgccagtctggaccccctgctcttctatttctcttcttcagtggtgcgc
agggcatttgggagagggctgcaggtgctgcggaatcagggctcctccctgttgggacgc
agaggcaaagacacagcagaggggacaaatgaggacaggggtgtgggtcaaggagaaggg
atgccaagttcggacttcactacagagtag

>gi568815579f:35359929_35472395|GENSCAN_predicted_peptide_6|27_aa
MCTHVREIRKGYVTVNNGYLGNWEEGS

>gi568815579f:35359929_35472395|GENSCAN_predicted_CDS_6|81_bp
atgtgtacacatgtacgtgaaattcgcaaaggctacgtgacagtcaacaatggttactta
ggaaattgggaggagggaagn