GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:49:48

Sequence gi568815579f:22037931_22238978 : 201048 bp : 38.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4326   4505  180  2  0   72   57    60 0.297   0.44
 1.02 Intr +   5782   5938  157  0  1   49  109    92 0.794   6.06
 1.03 Term +  14411  14700  290  0  2   57   43   246 0.150  11.55
 1.04 PlyA +  16543  16548    6                               1.05

 2.00 Prom +  27153  27192   40                              -6.45
 2.01 Init +  33385  33439   55  0  1   73   99    77 0.563   7.65
 2.02 Term +  50047  51512 1466  2  2   62   39  2541 0.223 236.43
 2.03 PlyA +  52247  52252    6                               1.05

 3.00 Prom +  81703  81742   40                              -3.45
 3.01 Init +  92449  92554  106  0  1   61   76    99 0.838   6.43
 3.02 Intr +  95968  95996   29  2  2  125   92     8 0.329   1.82
 3.03 Intr +  96677  96755   79  1  1   42   94    43 0.289  -1.49
 3.04 Intr +  98319  98351   33  1  0   69   95    43 0.296   0.38
 3.05 Intr + 100119 100480  362  1  2  104   54   422 0.578  34.41
 3.06 Term + 100569 101051  483  2  0   -6   49   337 0.594  14.16
 3.07 PlyA + 101079 101084    6                              -3.64

 4.00 Prom + 101242 101281   40                              -3.65
 4.01 Init + 102735 102903  169  2  1   92  -18   207 0.295  10.25
 4.02 Term + 111269 111813  545  0  2   53   37   398 0.697  24.64
 4.03 PlyA + 112362 112367    6                               1.05

 5.00 Prom + 112893 112932   40                              -6.15
 5.01 Init + 114810 115010  201  2  0   60   86    65 0.255   2.42
 5.02 Intr + 115066 115214  149  0  2   93   33    79 0.038   1.01
 5.03 Term + 136952 137237  286  2  1   32   43   209 0.090   4.69
 5.04 PlyA + 137337 137342    6                               1.05

 6.11 PlyA - 137372 137367    6                               1.05
 6.10 Term - 142030 141677  354  1  0  -66   48   673 0.703  41.41
 6.09 Intr - 143656 142062 1595  2  2   88   17  3108 0.086 291.15
 6.08 Intr - 155181 155086   96  1  0   26   96    99 0.009   3.56
 6.07 Intr - 158796 158670  127  0  1  101   72    64 0.013   5.43
 6.06 Intr - 177754 177702   53  2  2   68  101    25 0.041  -0.49
 6.05 Intr - 177985 177815  171  2  0   72   88    85 0.255   5.89
 6.04 Intr - 197447 197268  180  0  0  -52   68   212 0.208   4.12
 6.03 Intr - 198098 197978  121  2  1   54   42    75 0.293  -1.35
 6.02 Intr - 198469 198288  182  2  2   41   72   100 0.458   2.37
 6.01 Intr - 199619 199582   38  1  2  122  105    -4 0.223   1.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 143591 142062 1530  2  0   41   17  3110 0.818 291.57
S.002 Sngl + 189314 189790  477  1  0   73   37   177 0.894   6.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:22037931_22238978|GENSCAN_predicted_peptide_1|208_aa
WSQRLTGVLNLGLRVTNPPVDEIHVCDSIFQLSAAFGCEVQSLKSGLGSCGKMTIFTIVR
RVSSGGESHHLCAAFSNVSQYPLRGEPRQYCYITWVLGQGYVTIFPECGDQTAEHLITSP
VTQGLKGRGLKRYPVRDAGLETVQSDTKLERTGWLPGLAGTLSLALARAAGLVFPGLCPL
LLGAQPLWPCDLQVLGDPQLRRQVLLEA

>gi568815579f:22037931_22238978|GENSCAN_predicted_CDS_1|627_bp
tggagtcagaggctcacaggtgtgctgaatcttggtctgagagtcaccaacccacccgtt
gacgagatccatgtatgtgattcaatttttcaactttcagctgcctttggatgtgaggtt
cagagcctcaaaagtgggctgggttcatgtgggaaaatgacaatctttactattgtcagg
agagtaagcagtggaggagagtcacatcacctatgcgctgcgtttagcaatgtgtcacaa
taccctctgaggggagagcccaggcagtattgttacatcacctgggtgctaggtcaggga
tatgtcacaatcttccctgaatgtggggaccagacagccgagcatctgatcacgtctcct
gtcactcagggcctaaaggggcgaggccttaaacgttatccagtcagggacgctgggctg
gaaaccgtccaatcagacacgaagctggagcggacagggtggcttccgggtttggcgggt
actttgtctctcgctctagcccgagctgcaggtctcgtcttccctggtctgtgtcctctt
ctcctaggggcccagcctctgtggccctgtgacctgcaggtattgggagatccccagcta
agacgccaggtcctcctggaagcctag

>gi568815579f:22037931_22238978|GENSCAN_predicted_peptide_2|506_aa
MDGMFLQVLVLPVGVVVAVMCSHIAEDLCPERDIKYFFQKVILRRYDKCEHENLQLRKGC
KSVDECKVCKGGYNGLNQCLITTQSKMYQCDKYVKVFYKFSNSDRHKIRHTEKKTCKCKE
CGKSFCMLSQLTRHKRIHIRENSHKCEECGKAFNQSSALTRHKMTHTGEKPYKCEECGKA
FNRSSHLTQHKVIHTREKPYKCEECGKAFNRSSHITQHKRIHNREKPFKYDECCKAFKWS
SALTTLTQHKRIHTGEKPYKCEECGKAFNQSSALTRHKMIHTGEKPFQCEECGKAFNRSS
HLTQHKIIHTKEKPYKCEECGKAFNRSSHLTKHKRIHTREKAYKCDEYCKAFNWSSALTT
LTQHKIIHTGEKPYKCEECGKAFNRSSYLIRHKIIHTGEKPYKCEECGKAFNQSSHLTQH
KIIHTGEKPYKCEECGKAFNRSSHLSQHKIIHTGEKPYKCEECGKPFNRFSYLTVHKRIH
AGENPNKYEECGKACNHSSNLTKHNS

>gi568815579f:22037931_22238978|GENSCAN_predicted_CDS_2|1521_bp
atggatggaatgtttctgcaggtcttggtcctgccagtgggtgtggtggtagcagttatg
tgttctcatattgctgaagacctttgcccagagcgagacataaaatattttttccaaaaa
gtcatactgaggagatatgataaatgtgaacatgagaatttacaattaagaaagggctgt
aaaagtgtggatgagtgtaaggtgtgcaaaggaggttataatggacttaaccaatgtctg
ataactacccagagcaaaatgtatcaatgtgataaatatgtaaaagtcttctataagttt
tcaaattcagatagacataagataagacatactgaaaagaaaacttgcaaatgtaaagaa
tgtggcaaatcattttgcatgctttcacaactaactcgacataagagaattcatattaga
gagaattcccacaaatgtgaagaatgtggcaaagcctttaaccagtcctcagctcttact
cgacataagatgactcatactggagagaaaccctacaaatgtgaagagtgtggaaaagct
tttaaccggtcttcacaccttactcaacataaggtaattcatactagagagaaaccctac
aaatgtgaagagtgtggcaaagcctttaaccggtcttcacacattactcaacataagaga
attcataatagagagaagcccttcaaatatgatgaatgttgcaaagcctttaagtggtcc
tcagctcttactacccttactcaacataagagaattcatactggagagaaaccctacaaa
tgtgaagagtgtggcaaagcctttaaccagtcctcagcccttactcgacataagatgatt
catactggagagaaacccttccaatgtgaagagtgtggcaaagcttttaaccggtcttca
caccttactcaacataagataattcatactaaagagaaaccctacaaatgtgaagagtgt
ggaaaagcctttaaccggtcttcacaccttactaaacataagagaattcatactagagag
aaggcctacaaatgtgatgaatattgcaaagcttttaactggtcctcagctcttactacc
cttactcagcataagataattcatactggagagaaaccctacaaatgtgaagagtgtggc
aaagcctttaaccggtcttcataccttattcgacataagataattcatactggagagaaa
ccctacaaatgtgaagagtgtggcaaagcctttaaccagtcttcacaccttactcaacat
aaaataattcatactggggagaagccctacaaatgtgaagaatgtggcaaagcctttaac
cggtcttcacacctttctcaacataagataattcatactggagagaaaccctacaaatgt
gaagaatgtggcaagccttttaatcgtttctcataccttaccgtacataagagaattcat
gctggagagaaccccaacaaatatgaagaatgtggcaaagcttgtaaccattcctcaaac
cttactaaacataattcataa

>gi568815579f:22037931_22238978|GENSCAN_predicted_peptide_3|363_aa
MIFTEKEQIVPQLKKDITHKKKVSQKKLKKHKLMACGIVTYVFTQWKVGKLTIIHGSNPQ
VGWLISDIQHTEDYDVSSAPNPAGEEGPAPLSETGAPGCSGSRPPELEPERSLGRFRGRF
EDKDEQLEEEEELEEEEEEEEEEDMSHFSLRLEGGRQDSEDEEERLINLSELTPYILCSI
CKGYLIDATTITEYLYTFCKSCVLQDIVYKLVINLEEREKKQMHDFYQERGLEVPKPAVP
QPVPSSKGRSKKIRESVFPIPPELDMSLLLEFIGANEGTGHFKPLEKKFVRVSGEATIGH
VEKFFRRKMGLDPACQVDIICGDHLLEQYQTLREIRRAIGDAAMQDGLLVLHYGLVVSPL
KIT

>gi568815579f:22037931_22238978|GENSCAN_predicted_CDS_3|1092_bp
atgatctttactgaaaaggaacaaattgttcctcaactgaaaaaggacattacccacaaa
aaaaaggtgtcccagaagaaactgaagaaacacaaacttatggcctgtggaattgtgaca
tatgtctttactcagtggaaagttggaaaattgactatcatccatggatccaatccacaa
gtgggttggttaatctcagacattcagcacacagaagattatgacgtatcttcagcccca
aacccagcgggtgaggagggaccggcgcctctgtctgagactggggctcccggctgctcc
ggctcccggccccctgagctggagccagagcgcagcctgggccgcttcagaggccgcttc
gaggataaggacgagcagttggaagaagaagaggagctagaggaggaagaagaggaggag
gaggaggaggacatgagtcacttctcgttgaggctggagggaggccggcaagactcggag
gacgaggaggagcgcctgattaatctctctgagctgaccccatatatcttgtgttccatt
tgcaaaggttacttaatagatgcaactaccatcacagaatatctttataccttttgtaaa
agctgcgtcttacaagacatagtgtacaaattagtgatcaatctagaggaaagagaaaaa
aagcaaatgcatgatttctatcaagaaagaggtctagaagtacctaaacctgctgttcca
cagccagtcccttcaagcaaaggaagatctaaaaaaatccgagaatcagtgtttcctatt
ccacctgaacttgatatgtctttattactggagttcattggtgctaatgaaggcacggga
cattttaagccattggaaaagaagtttgttcgagtttcaggagaagcaactattggacat
gtagaaaaattcttcagaagaaaaatgggtcttgatccagcttgtcaggtagatatcatc
tgtggtgatcacctgttggagcagtatcaaactctaagggaaatccgacgtgcaataggt
gatgcagcaatgcaggatggtctgcttgtccttcattatggtcttgtagtttctcctctg
aagataacttga

>gi568815579f:22037931_22238978|GENSCAN_predicted_peptide_4|237_aa
MVPVNQALLTNLRCQEQKNGELLPNEQTVGATECEAAQTPQSGAVKQTPEKDKKNETSTG
DTQANRLWSGPPANSNRPAAEKPDCQKENQQTERNRSNINKKDIYTKTPSVGHQLQRPNV
DKTTKVGRNQSRKAENSKNQGTSSRPKDHSSSPAMEQSWMENGFEELTEVGFRRSVITNF
SELKEHVQTHHKEAKNLKERVDEWLTRINSEEKTLNDLMELKTMARELSDACTSFNS

>gi568815579f:22037931_22238978|GENSCAN_predicted_CDS_4|714_bp
atggtccctgtaaaccaggccttgctgacaaatctcagatgccaagaacagaagaacgga
gagcttctgccaaatgaacaaactgttggagcgactgagtgtgaagctgcccaaactcct
caaagtggagcagtgaagcaaacaccagagaaggacaagaaaaatgaaacctccactggt
gacacccaggcaaacaggttgtggagtggacctccagcaaattccaacagacctgcagct
gagaaacctgactgtcagaaagaaaaccagcaaacagaaaggaatagaagcaacatcaac
aaaaaggacatatacaccaaaaccccatctgtaggtcaccaacttcaaagaccaaatgta
gataaaaccacaaaggtggggagaaaccagagcagaaaagctgaaaattctaaaaaccag
ggcacctcttctcgtccaaaggatcacagctcctcaccagcaatggaacaaagctggatg
gagaatggctttgaagagttgacagaagtaggcttcagaaggtcggtaataacaaacttc
tctgagctaaaggagcatgtacaaactcatcacaaggaagctaaaaaccttaaagaaagg
gtagacgaatggctaactagaataaacagtgaagagaagaccttaaatgacctgatggag
ctgaaaaccatggcacgagaacttagtgatgcatgcacaagcttcaatagctga

>gi568815579f:22037931_22238978|GENSCAN_predicted_peptide_5|211_aa
MSELPFTIAAKRIKYLGIQIPRNVKDLFKESYKPLLNEIKEDTNKWKYIPCSWMGRINIV
KMAILPKNWKKTTLKFIWNQKRALIAKTILTKKNKAEGITLPDFRLYYKATITKTAWNVD
VQQHVLNPAQGMGEANDFRAFILSLRHLELLVLMVTVRKTGKGQVAYAPMTGHCVITVNW
FACKLTGNVLIQKLPLSPKVLRENDQGDRYT

>gi568815579f:22037931_22238978|GENSCAN_predicted_CDS_5|636_bp
atgagtgaactcccattcacaattgctgcaaagagaataaaatacctaggaatacaaatt
ccaaggaatgtgaaggacctcttcaaggagagctacaaaccactgctcaatgaaataaaa
gaggacacaaacaaatggaagtacattccatgctcctggatgggaagaatcaatattgtg
aaaatggccatactgcccaagaattggaaaaaaactactttaaagttcatatggaaccaa
aaaagagccctcattgccaagacaatcctaaccaaaaagaacaaagctgaaggcatcaca
ctacctgacttcagactatactacaaggctacaataaccaaaacagcatggaacgttgat
gttcaacagcatgttctgaacccagcacagggcatgggagaagccaatgactttagggct
tttattttaagcttgcggcacctggagttactggtgcttatggtaacagtacgaaagaca
ggaaaagggcaggttgcttatgctcccatgactggccactgtgtgatcacagtaaactgg
tttgcatgcaaactcacaggaaatgttttaatccaaaagctgccattatctccaaaagtt
ttgagagaaaatgatcaaggagatcgctacacttag

>gi568815579f:22037931_22238978|GENSCAN_predicted_peptide_6|972_aa
XHISRLKSQRPPRVKVEAYGGHVLNRNLAQVQLTVDQVGPKTHSVVISPVPECKIGIDIL
SRWQNSYIGSLSSRKTDGFWRMTVDYRKLNQVMTPIAAAILDVVSLLEQITTSPVTQKAA
SSECGPEKKKALQQVQAAVQAALPLGPYYPGDPMDLEVSVKNKDAICSLWQAFSAQHLIT
SSVTQGLKGRGLKHYPIRDAGLGMSNQAGSWGGGQVGFRDVVGPLSLAAAGGIGRSTTKS
PGPPGSLEMGALTFRDVAIEFSLEEWQCLDSTQQNLYRNVMLENYRNLVFLGIAAFKPDL
IIFLEQGKEPWNMKRHEMVEEPPVICSHFSQEFWPEQGIEDSFQKMILRRYDKCGHENLH
LKISCTNVDECNVHKEGYNKLNQSLTTTQSKVFQCGKYANVFHKCSNSNRHKIRHTGEKG
LKCKEYVRSFCMLSHLSQHERIYTRENSYKCEENGKAFNWSSTLTYYKSIHTGEKPYKCE
ECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAFNRSSILTKHKIIHTGEKPYKCEECGK
GFSSVSTLNTHKAIHAEEKPYKCEECGKASNSSSKLMEHKRIHTGEKPYKCEECGKAFSW
SSSLTEHKRIHAGEKPYKCEECGKAFNRSSILTKHKIIHTGEKPYKCEGCGKAFSKVSTL
NTHKAIHAEEKPYKCEECGKASNSSSKLMEHKRIHTGEKPYKCEECGKAFSWSSSLTEHK
RIHAGEKPYKCEECGKAFTWSSSFTKHKRIHAAEKPYKCEECGKGFSTFSILTKHKIIHT
GEKRYKCEECGKAFSWSSILTEHKIIHTGEKPYKCEECGKAFSRSSSLTRHKRIHTGEKP
YKCEECGKAFKSSSTRIPKNVKNVVNPSADSQSSKHKKIHTGEKIYKGEECGKAFKQSSI
FITHKKIHAGEKHYKREECDKGFNRSSNLVEHKRIHTGEKPYKCEECDKDFNCSSHLTTH
KRIHTGGKALQM

>gi568815579f:22037931_22238978|GENSCAN_predicted_CDS_6|2919_bp
nngcatataagtagactaaagtcccagcggccccctagagttaaagtagaggcttatgga
ggtcatgtacttaatagaaatttagctcaggtccaacttacagttgatcaagtgggtccc
aagactcactctgtggtcatttccccagttccagaatgcaaaattggcatagacatactt
agcagatggcagaactcctacattggctccctgagtagtaggaagacagatggattttgg
agaatgacagtggattatcgtaagcttaaccaagtgatgactccaattgcagctgccata
ctagatgtagtttcattgcttgagcaaattaccacatctcctgtgacccaaaaagctgcc
agttctgagtgtggtccagaaaagaagaaggctctgcaacaggtccaggctgctgtgcaa
gctgctctgccacttgggccatattacccaggagatccaatggatcttgaggtgtcggtg
aaaaataaagatgctatttgcagcctttggcaagccttctcagcccagcatctgatcaca
tcttctgtcactcagggcctgaaagggcggggccttaaacattatccaatcagggatgct
gggctgggaatgtccaatcaggcaggcagctggggggggggacaggtcggcttccgggat
gtggtcggtcctttgtctctcgctgcagccggaggtattgggagatccacaactaagtcg
ccaggaccccctggaagcctagaaatgggagcattgacatttagggatgtggccatagaa
ttctctctggaggagtggcaatgcctggattctacacagcagaatttatataggaatgtg
atgttagagaactacagaaacctggtcttcctgggtattgctgcctttaagccagacctg
atcatttttctggagcaaggaaaagagccctggaatatgaagagacatgagatggtggaa
gaacccccagttatatgttctcatttttcccaagagttttggccagagcaaggcatagaa
gattctttccaaaaaatgatattgagaagatatgacaaatgtggacatgagaatttacac
ttaaaaattagttgtaccaatgtggatgagtgtaacgtgcacaaagaaggttataataaa
cttaaccagagtttaacaactacacagagcaaagtatttcaatgtggcaaatatgcaaac
gtctttcataaatgttcaaattcaaacagacataagataaggcatactggagagaaaggt
ttgaaatgtaaagaatatgtcagatcattttgcatgctttcacacctatctcaacatgaa
agaatttatactagagagaattcctacaaatgtgaagaaaatggcaaagcttttaactgg
tcctcaacccttacttattataagagtattcatactggagagaaaccctacaaatgtgaa
gaatgtggcaaagcctttagtaagttctcaatccttactaaacataaggtaattcatact
ggagagaaaccctacaaatgtgaagaatgtggcaaagcttttaatcgatcctcaatcctt
actaaacataagataattcatactggagagaaaccctacaaatgtgaagaatgtggcaaa
ggatttagtagcgtctcaacccttaatacacataaggcaattcatgctgaagagaagccc
tacaaatgtgaagaatgtggcaaagcttccaactcgtcctcaaagctcatggaacataag
agaattcatactggagagaaaccctacaagtgtgaagaatgtggcaaagccttcagctgg
tcctcaagccttactgaacacaagagaattcatgctggagagaaaccctacaaatgtgaa
gaatgcgggaaagcttttaatcgatcctcaatccttactaaacataagattattcatact
ggagagaaaccctacaaatgtgaaggatgtggcaaagcctttagtaaggtctcaaccctt
aatacacataaggcaattcatgctgaagagaagccctacaaatgtgaagaatgtggcaaa
gcttccaactcatcctcaaagctcatggaacataagagaattcatactggagagaaaccc
tacaagtgtgaagaatgtggcaaagccttcagctggtcctcaagccttactgaacacaag
agaattcatgctggagagaaaccctacaaatgtgaagaatgtggcaaagccttcacctgg
tcctcaagctttactaaacacaagagaattcatgctgcagagaaaccttacaaatgtgaa
gaatgtggcaaaggctttagtacgttctcaatccttactaaacataagataattcatact
ggagagaaacgctacaaatgtgaagaatgtggcaaagccttcagctggtcctcgatcctt
actgaacataagataattcatactggagagaaaccctacaaatgtgaagaatgtggcaaa
gccttcagcagatcctcaagccttactagacacaagagaattcatactggagagaaaccc
tacaaatgtgaagaatgtggcaaagcttttaagtcatcctcaactagaatccctaaaaat
gtgaagaatgtggtaaatccttcagctgattctcagtctagtaaacataagaaaattcat
actggagagaaaatctacaaaggtgaagaatgtggcaaagcttttaaacagtcctcaatc
tttattacacataagaaaattcatgctggagagaaacactacaaacgtgaagaatgtgac
aaaggcttcaaccggtcctcaaaccttgtggaacataagagaattcatactggagagaaa
ccctacaaatgcgaagaatgtgataaagacttcaactgttcctcacaccttactactcat
aaaagaattcatactggaggaaaagccctacaaatgtga