GENSCAN 1.0	Date run:  6-Nov-116	Time: 13:07:12

Sequence gi568815578r:23776191_23979676 : 203486 bp : 43.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   7368   8048  681  2  0   76   40  1099 0.838 100.09
 1.02 PlyA +   8092   8097    6                              -0.45

 2.02 PlyA -   8199   8194    6                               1.05
 2.01 Sngl -  12225  11647  579  0  0   74   32   217 0.841  10.88
 2.00 Prom -  16139  16100   40                              -5.66

 3.00 Prom +  17640  17679   40                              -3.26
 3.01 Init +  23445  23551  107  2  2   98   -1    63 0.300  -3.79
 3.02 Term +  24289  24751  463  1  1   41   37   677 0.991  52.43
 3.03 PlyA +  25275  25280    6                               1.05

 4.00 Prom +  27122  27161   40                              -4.06
 4.01 Init +  36017  36129  113  1  2   92   73   132 0.990  11.78
 4.02 Term +  37876  38443  568  1  1   51   47   185 0.547   4.59
 4.03 PlyA +  39863  39868    6                               1.05

 5.04 PlyA -  42253  42248    6                               1.05
 5.03 Term -  47913  47830   84  0  0  107   50    23 0.504  -1.95
 5.02 Intr -  49133  49020  114  2  0   62  102   146 0.987  14.04
 5.01 Init -  50470  50243  228  1  0  102   94   557 0.999  54.07
 5.00 Prom -  54497  54458   40                              -5.86

 6.00 Prom +  58363  58402   40                              -7.86
 6.01 Init +  60588  60971  384  2  0   70   41   201 0.034  10.44
 6.02 Intr +  63688  63855  168  0  0   -1   94   119 0.038   3.74
 6.03 Term +  67001  67099   99  1  0  114   48    26 0.520  -0.67
 6.04 PlyA +  69411  69416    6                               1.05

 7.03 PlyA -  70736  70731    6                               1.05
 7.02 Term -  79202  79119   84  2  0  114   49    21 0.675  -1.55
 7.01 Init -  80628  80527  102  0  0   70   87    89 0.588   7.24
 7.00 Prom -  86051  86012   40                              -2.96

 8.04 PlyA -  86347  86342    6                               1.05
 8.03 Term - 100081  99998   84  1  0  115   50    58 0.854   2.35
 8.02 Intr - 101428 101315  114  1  0   68   87   128 0.997  11.34
 8.01 Init - 103486 103256  231  1  0   65   96   446 0.593  39.36
 8.00 Prom - 110276 110237   40                              -4.56

 9.00 Prom + 113154 113193   40                              -7.36
 9.01 Sngl + 114686 115162  477  1  0   76   53   715 0.946  62.90
 9.02 PlyA + 115412 115417    6                              -0.45

10.11 PlyA - 115515 115510    6                               1.05
10.10 Term - 120498 120439   60  0  0   51   50    79 0.127  -1.80
10.09 Intr - 122411 121620  792  2  0   15  -33   375 0.005   9.77
10.08 Intr - 123488 123241  248  0  2   46   41   219 0.003  10.18
10.07 Intr - 136169 136002  168  0  0  126   27    72 0.029   4.82
10.06 Intr - 141415 141342   74  0  2   57   45    27 0.053  -5.65
10.05 Intr - 142664 142597   68  2  2  113   64    45 0.284   2.30
10.04 Intr - 143986 143874  113  2  2   95   87    38 0.609   4.50
10.03 Intr - 145302 145140  163  0  1   52   20    80 0.540  -2.85
10.02 Intr - 145922 145758  165  2  0   16   94   149 0.597   8.46
10.01 Init - 151103 151056   48  2  0   95   73    18 0.232   1.95
10.00 Prom - 159026 158987   40                              -1.46

11.00 Prom + 162352 162391   40                              -0.36
11.01 Init + 162586 162834  249  0  0   39   50   123 0.526   1.23
11.02 Term + 166316 166738  423  1  0   43   40   553 0.451  41.30
11.03 PlyA + 167606 167611    6                               1.05

12.02 PlyA - 168821 168816    6                               1.05
12.01 Term - 176212 175995  218  2  2   82   42   148 0.812   6.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_1|226_aa
MVITIITTIIIIITTITITIIITVTITATTKTITINTSTTIIPTITTIITTNTIINIITI
ITTTIIINTTISAIITITTTTITTITITNFTTITITTTITTRATIITTIITTTTTTNIIT
IITITITINNTSITAVINITISITTITISILIIIIHIMSTTIIINTITIITITSITTIPS
SSSSKPPPPSPFSSPAYHSHHHHHLQHHCQVSVSSCSALDIVPHPL

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_1|681_bp
atggtcatcaccatcatcaccaccatcatcataatcatcactaccatcaccatcactatt
atcatcaccgtcaccattactgccaccaccaagaccatcaccatcaacaccagtaccacc
ataatacccaccatcactaccatcattaccaccaacactattatcaacatcatcactatc
atcaccaccaccatcattatcaataccaccatctctgccatcatcaccatcaccaccacc
actattactaccatcactattaccaacttcaccactattaccatcaccactactattact
acaagagctaccatcatcaccaccattataaccaccaccaccaccaccaacatcatcact
attatcacaatcaccatcaccattaacaataccagcattactgctgtcatcaacatcacc
atctccattaccaccatcaccatcagtatactcatcatcattatacacatcatgagcacc
actatcatcatcaacaccatcaccatcattaccattaccagcattaccaccataccatca
tcatcatcttcaaaaccaccaccaccatcaccattttcatccccagcatatcattctcat
caccatcatcatcttcagcaccactgccaggtgtctgtcagcagctgttctgcattggac
attgtgccacaccctttataa

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_2|192_aa
MVILPKVIYRFNAILIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKVGGITLPD
FKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKKWGKDSLFNK
FCWENWLAIGRKLKLDPFLTPYTKINSRRIKDLNVKPKTIKTLEENLGITIQDIGMSKNF
MSKTPKAMATEA

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_2|579_bp
atggtcatactgcccaaggtaatttatagattcaatgccatcctcatcaaactaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacattgccaagtcaatcctaagccaaaagaacaaagttggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtaccggtaccaaaacaga
gatatagaccaatggaacagaacagagccctcagaaataatgccacatatctacaactat
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaacaaa
ttttgctgggaaaactggctagccataggtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagacggattaaagacttaaatgttaaacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgagcaagaacttc
atgtcaaaaacaccaaaagcaatggcaacagaagcgtaa

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_3|189_aa
MASRWHSLLFLQLSPQPLLDRPRMDPLRRQGLSQGGHHHYHHDNHHCPITITVTTTVVNI
ISSVTIIISNITIITLSTISTFIPIIINTPSPLLLSLSTTITIIINTIAIAISITTNITI
TTITTTTTITITIIITTITNTIAITITTTITMVILISNTIIIMTTITNINMTTITTIITT
SLSSLPSSP

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_3|570_bp
atggccagtagatggcatagcctcctgttcctgcagctgtccccacagcccctgctggac
aggcccagaatggaccctctcagaagacaaggactctctcagggtggccatcaccattat
catcatgacaatcaccactgtcccatcaccatcaccgttaccaccactgttgtaaacatc
atctctagtgtcaccattattatctccaacatcaccatcatcactctcagtaccatcagc
acatttatccccattatcatcaacaccccatcaccactattactatcactatcaaccacc
atcaccatcattatcaacaccattgccattgccatcagtattactactaacatcaccatc
accactatcaccacaaccaccaccattaccatcaccatcatcatcactaccatcaccaac
accattgccatcaccattaccaccacaatcaccatggtaatcctcatcagtaacaccatc
atcatcatgactaccattaccaatatcaacatgaccaccataaccaccatcatcaccaca
tcactgtcttcattaccatcatcaccataa

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_4|226_aa
MRVHGFILEVSKTKNPPERTNSGHILVIMKALLPMTKQQIKTDLGKFSDDPDSYIDVLQG
LRQTFNLTWRDVMLLLDQILAFNEKNAALSSAKEFGDTWYLTQVNDRMTAEERDKFPTAQ
QAIPSRAPHWDLNSDHGDWSHKHLLTCVLEGVRRMRKKPMNYSVMSTMSGKGRKCFCLPQ
AATGGLKKIYSPVTQLTGGSIDPKREVYYPISCRHQEKAPKVSHGP

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_4|681_bp
atgagggtccacggcttcattcttgaagtcagcaagaccaagaacccaccagaaagaacc
aattctggacacattttggtgatcatgaaggcactattgcctatgaccaagcagcagatc
aagacagacctggggaagttttcagatgatcctgatagttacatagatgtcctacagggc
ctaaggcaaaccttcaatctcacttggagagatgtcatgctattattagatcaaatcctg
gcctttaatgaaaagaatgcagctttatcttcagccaaagagtttggagatacctggtat
cttactcaagtaaatgatagaatgacagctgaagaaagggacaaattccctactgctcag
caagccatccccagtagggctccccactgggacctcaactcagatcatggagactggagt
cacaaacatctgttaacctgtgttctagaaggagtaaggagaatgaggaaaaagcccatg
aattattcagtgatgtccaccatgtcagggaaaggaagaaaatgcttctgcctccctcaa
gcagctacgggaggccttaagaaaatatactcccctgtcacccaactcactggagggtca
attgatcctaaaagagaagtttattacccaatcagctgcagacatcaggagaaagctcca
aaagtaagccatgggccctga

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_5|141_aa
MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATE
DEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF
QIYEVPWEDRMSLVNSRCQEA

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_5|426_bp
atggcctggcccctgtgcaccctgctgctcctgctggccacccaggctgtggccctggcc
tggagcccccaggaggaggacaggataatcgagggtggcatctatgatgcagacctcaat
gatgagcgggtacagcgtgcccttcactttgtcatcagcgagtataacaaggccactgaa
gatgagtactacagacgcctgctgcgggtgctacgagccagggagcagatcgtgggcggg
gtgaattacttcttcgacatagaggtgggccgaaccatatgtaccaagtcccagcccaac
ttggacacctgtgccttccatgaacagccagaactgcagaagaaacagttgtgctctttc
cagatctacgaagttccctgggaggacagaatgtccctggtgaattccaggtgtcaagaa
gcctag

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_6|216_aa
MELKAMARDIHDACTSFSSQIDQVEERISVIEDQINEMKQEEKFREKRVKTNEQSLQEIC
GYVKRPNLRLIGVPEGDGENGIKLENTLQDIIQENFPDLARQANIQIQEIQRTPQRYTLR
RATPRHIMRIKYLGIQLTRDVKDLFKENYKLLLNEINEDTNKWKNIPRSWIGRINILKMA
IMPKCHSPFCLTPYLCSKEQYRVWMLVKRVHSNQPA

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_6|651_bp
atggagctgaaagccatggcacgagacatacatgatgcatgcacaagcttcagtagccaa
attgatcaagtggaagaaaggatatcagtgattgaagatcaaattaatgaaatgaagcaa
gaagagaagtttagagaaaaaagagtaaaaacaaatgaacaaagcctccaagaaatatgt
ggctatgtgaaaagaccaaatctacgtttgattggtgtgcctgaaggtgatggggagaat
ggaatcaagctggaaaatactcttcaggatattatccaggagaacttcccagacctagca
aggcaggccaacattcaaattcaggaaatacagagaacaccacaaagatacaccttgaga
agagcaaccccaagacacataatgagaataaaatacctaggaatccaacttacaagggat
gtgaaggatctcttcaaggagaactacaaattactgctcaatgaaataaacgaggacaca
aacaaatggaagaatattccacgctcatggataggaagaatcaatatcctgaaaatggcc
ataatgcccaagtgccacagtcccttctgcctcaccccctatctctgctctaaggaacag
tacagagtgtggatgctggtgaaacgtgttcatagtaaccagccagcctga

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_7|61_aa
MNYFFDVEMGQITCAKSQPNLDNCSFHHQRKLQEKQFCSFQICEVPWDDRISLVKSTCQN
V

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_7|186_bp
atgaactacttctttgatgtggagatggggcaaatcacatgtgccaagtcccagcccaac
ttggacaactgttccttccatcaccagcgaaaacttcaggagaaacagttctgctctttc
cagatctgtgaagttccttgggatgacagaatatctttggtgaaatccacatgtcagaat
gtctag

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_8|142_aa
MMWPMHTPLLLLTALMVAVAGSASAQSRTLAGGIHATDLNDKSVQCALDFAISEYNKVIN
KDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPFNDQPKLKEEEFCS
FQINEVPWEDKISILNYKCRKV

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_8|429_bp
atgatgtggcccatgcacaccccactgctgctgctgactgccttgatggtggccgtggcc
gggagtgcctcggcccaatctaggaccttggcaggtggcatccatgccacagacctcaat
gacaagagtgtgcagtgtgccctggactttgccatcagcgagtacaacaaggtcattaat
aaggatgagtactacagccgccctctgcaggtgatggctgcctaccagcagatcgtgggt
ggggtgaactactacttcaatgtgaagttcggtcgaaccacatgcaccaagtcccagccc
aacttggacaactgtcccttcaatgaccagccaaaactgaaagaggaagagttctgctct
ttccagatcaatgaagttccctgggaggataaaatttccattctgaactacaagtgccgg
aaagtctag

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_9|158_aa
MVITIITTLTIIITTITITIIITVTITATTKTITIKTSTTIIPTITTIFTTITIITIIIT
IITTIIIIINTTVSAVITITTTTITTITITNFTTITITTIIITRATIITTIITTTTTTII
TIITITSPLSIPTLLLSSTSPSPLPPSPSVYSPSLYSS

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_9|477_bp
atggtcatcaccatcatcaccaccctcaccataatcatcactaccatcaccatcactatt
atcatcaccgtcaccattactgccaccaccaagaccatcaccatcaaaaccagtaccacc
ataatccccaccatcactaccatctttaccaccatcaccattatcaccatcatcatcact
atcatcaccaccatcatcatcattatcaatacgaccgtctctgccgtcatcaccatcacc
accaccactattactaccatcactatcaccaacttcaccactattaccatcaccactatt
atcattacaagagctaccatcatcaccaccattataaccaccaccaccaccaccatcatc
actattatcacaatcacatcaccattatcaataccaacattactgctgtcatcaacatca
ccatcaccactaccaccatcaccatcagtatactcaccatcattatactcatcatga

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_10|632_aa
MGKDGATNTDGDTSRRSPPALARKIIQSDICDADLNDDRWQHALDFAISEYNKERMMNTT
VTPQVLPGQQQGEWPSPSGWLTTPDSPGQLSSFWGGARLTLLLPADIASDLNQMRTAVTQ
HSGGGDVGWVSYFFDMKIDLTTCTKSQPDLDNCLFSDQPQLKEKQFCSFQIYEVPLKDRM
SLVKSRQRSAALTASASGAGLSNIFHAYSCRCSLGQDALGYGVHLSLMSHVLKNKSQRNN
GEDGRKPPGPLLRTLQQLCEHHPTTFEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLP
RLNQEEVEFLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELRTIYLGIQLTR
DMKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKVAILPKVIYRFNAIPIKLPMT
FFTELEKTTLKFIWNQKRARITKSILSQKNKAGGITLADFKVYYEATVTKTAWYWYQNRD
IDQWNRTEPSEITLLIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICGKLKLDPFLTP
YTKINLGWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAIIDKWDLMK
LKSFCTAKETTFRVFGEQVVFGYINKLFNGDF

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_10|1899_bp
atgggcaaggatggggctactaacacagatggggacactagtcgaaggagtcccccagct
ctggctagaaagatcattcaaagtgacatctgtgatgcagaccttaatgatgatagatgg
cagcatgccctggacttcgccatcagtgagtacaacaaggagagaatgatgaacactaca
gtcaccccgcaggtgctgccaggccaacagcagggcgagtggccttcaccctcaggctgg
ctgaccacccccgacagcccagggcagctgagttccttctggggtggagcacgcctgacc
ctgcttttgccagctgacatagcatcagacctcaaccagatgaggacagcagtcacccag
catagtggaggaggggatgtgggctgggtgagctacttctttgatatgaagatagaccta
accacatgcactaagtctcagccagacttggacaactgtctcttcagtgaccagccacag
ttgaaggagaaacagttctgctctttccagatctacgaagttcccttgaaggacagaatg
tccctggtgaaatccagacagaggagtgcagccctcacggccagtgcctctggggcaggg
ctctcaaatatcttccatgcctacagctgcaggtgtagtttgggacaggatgccttgggc
tatggagtccacctttcacttatgagccatgtgctcaagaacaagagccaaaggaacaat
ggagaagatggaaggaaaccacctgggcccctgctgaggacactgcagcaactctgtgaa
caccatcccacgacctttgaaatacaaactaccatcagagaatactacaaacacctctac
gcaaataaactagaaaatctagaagaaatggataaattcctcgacacatacactctccca
agactaaaccaggaagaagttgaatttctgaatagaccaataacaggatctgaaattgtg
gcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaa
ttctaccagaggtacaaggaggaactgagaacaatatacttaggaatccaacttacaagg
gacatgaaggacctcttcaaggagaactacaaaccactgcttaatgaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaagtg
gccatactgcccaaagtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggagaaaactactttaaagttcatatggaaccaaaaaagagcccgc
atcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctagctgacttc
aaagtatactacgaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaacagagccctcagaaataacgctgcttatctacaactatctg
atctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctagccatatgtggaaagctgaaactggatcccttccttacacct
tatacaaaaatcaatttgggatggattaaagacttaaacgttagacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg
tccaaaacaccaaaagcaatggcaacaaaagccataattgacaaatgggatctaatgaaa
ctaaagagcttctgcacagcaaaagaaactaccttcagagtttttggcgaacaggtggtg
tttggttacatcaacaagttgtttaatggtgatttctga

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_11|223_aa
MKRLSTLLTLHLYAYPIPPGRGTGTQDLPNGETARAVRAETPPNSPHCGDEERKAVAILG
ARAVICFNTLFGALWFLASPSFQHHHHYHNHSDHYHHHSTNANIITITIIIITTTTSISI
INTAAISITSTTIITITTIAITNTIIITTNNINTITISTINTISITTILTTITTIITTIT
PMITIIIASHHYHHQHHQHHHYSHRHHYHKRSHHDHHHHHHHH

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_11|672_bp
atgaagcgcctctccaccttgctcaccctccacttgtacgcataccccattcctcctgga
cgtgggacaggaactcaggacctgccaaatggcgagactgcaagagctgtaagggctgaa
acaccccccaactcaccacactgtggtgatgaggagagaaaagctgtggccattctggga
gccagggctgtgatatgctttaacaccctgtttggggctctgtggttcctggcatctcca
agctttcagcaccaccaccactaccataaccattctgatcattatcaccatcattctacc
aatgctaacatcatcaccatcaccatcatcatcatcactaccaccaccagcatctccatt
atcaacactgccgccatcagcatcacctccactactatcatcacaattaccaccatcgca
atcacaaacaccatcatcatcaccacaaataacataaacaccatcaccatcagtaccatc
aacaccatcagcatcacaaccatcctcaccaccatcaccactatcatcactaccatcacc
cccatgattaccattattattgccagtcaccactaccatcaccaacaccaccagcaccat
cattattctcaccgtcaccattatcacaagcgttctcaccatgaccatcatcaccatcac
caccatcactga

>gi568815578r:23776191_23979676|GENSCAN_predicted_peptide_12|72_aa
XLTLGHCTAGQDALGYGVHLSLMSNVPKNKSPRNGVEDGRKPPGPLLRTLHQLYELTTPT
AVGKWMSSSWEV

>gi568815578r:23776191_23979676|GENSCAN_predicted_CDS_12|219_bp
ncccttacccttggacactgtactgcgggacaggatgccttgggctatggtgttcacctt
tcactcatgagcaatgtgcccaagaacaagagcccaaggaatggtgtagaagatggaagg
aaaccacctgggcccctgctgaggacactgcaccaactctatgaattgaccacccctaca
gctgttggtaaatggatgtcgtcttcatgggaggtgtag