GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:10:07

Sequence gi568815578r:22481853_22684260 : 202408 bp : 43.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   3594   3589    6                               1.05
 1.07 Term -  12647  12507  141  2  0   86   44    54 0.155  -1.27
 1.06 Intr -  18314  18197  118  1  1   17   69   119 0.334   3.37
 1.05 Intr -  18655  18455  201  0  0   38   86    81 0.133   1.30
 1.04 Intr -  26135  26036  100  0  1   76   65   104 0.505   6.07
 1.03 Intr -  33902  33792  111  0  0   56   81    47 0.014   1.15
 1.02 Intr -  41526  41496   31  0  1   68  100    29 0.002  -0.20
 1.01 Init -  54935  54738  198  2  0  110   59    34 0.238   1.60
 1.00 Prom -  56038  55999   40                              -5.06

 2.03 PlyA -  56674  56669    6                               1.05
 2.02 Term -  57233  56922  312  2  0   25   39  1007 0.865  84.50
 2.01 Init -  59620  59588   33  1  0   36   80     4 0.333  -7.66
 2.00 Prom -  60959  60920   40                              -5.06

 3.00 Prom +  61411  61450   40                              -7.56
 3.01 Init +  62475  62476    2  2  2   60  103     0 0.869  -4.21
 3.02 Term +  63287  63530  244  2  1    9   28   456 0.998  27.07
 3.03 PlyA +  63692  63697    6                               1.05

 4.00 Prom +  74722  74761   40                              -2.46
 4.01 Init +  79026  79093   68  2  2   79   53   105 0.161   4.65
 4.02 Intr +  86990  87285  296  2  2   31   57   198 0.044   7.65
 4.03 Intr +  94680  94788  109  1  1   57   82    55 0.043   1.14
 4.04 Intr +  95238  95403  166  0  1   99   57    77 0.039   5.66
 4.05 Term +  95968  96093  126  0  0   42   45   117 0.034   1.08
 4.06 PlyA +  96913  96918    6                               1.05

 5.05 PlyA -  97041  97036    6                               1.05
 5.04 Term - 101302  99998 1305  1  0   83   48  2027 0.992 189.79
 5.03 Intr - 102409 102340   70  0  1   55   99    47 0.542   1.68
 5.02 Intr - 104164 104079   86  1  2  113   80    43 0.840   4.62
 5.01 Init - 105040 104918  123  1  0   43   59   120 0.806   3.93
 5.00 Prom - 115023 114984   40                              -5.86

 6.07 PlyA - 117593 117588    6                               1.05
 6.06 Term - 119170 119047  124  0  1   65   43   187 0.736   9.76
 6.05 Intr - 135508 135405  104  1  2   38   69    59 0.002  -2.03
 6.04 Intr - 141819 141720  100  2  1  107   82    52 0.506   6.61
 6.03 Intr - 152637 152608   30  2  0   86   94    46 0.160   2.25
 6.02 Intr - 163306 163138  169  2  1   26   56    83 0.080  -2.10
 6.01 Init - 163463 163379   85  2  1   53   72    79 0.646   3.78
 6.00 Prom - 164744 164705   40                              -1.66

 7.00 Prom + 187384 187423   40                              -1.96
 7.01 Init + 195535 195655  121  0  1   71   49    62 0.425   0.97
 7.02 Term + 196332 196420   89  1  2  110   50    60 0.692   2.22
 7.03 PlyA + 198167 198172    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  96745  96658   88  1  1   74   91   164 0.819  14.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:22481853_22684260|GENSCAN_predicted_peptide_1|299_aa
MADVGSMVEKAFSGDEITQRQLVKSQPDSLFIYASLSDRLQAHHLTLLSLSFLICKRKVK
GSVTLFGSPTGELKAEENKSFPITSAKHQSPGVEPAGTLAALKHSPPELPLKQGKVHYFS
ELQSTQQFLFGFPLLVVVEIQQDRSKSGTRMMLRRQDHFVVGKAEAPHWVSRGFMKFAPV
LQEAAELGHHQQCVFNFISCVALLGKLLAREESRKEKSIACENGIGKTSAEHTALLIPGG
GGDEEVCKQALKQVNPLGICSLSFAEPVSPFDSILILQTEGTGNNCGLSKKQHLFSPYI

>gi568815578r:22481853_22684260|GENSCAN_predicted_CDS_1|900_bp
atggcagatgttggaagcatggtagaaaaagccttcagtggggatgagatcactcagaga
caattggttaagagccagccagacagcctgtttatatatgcttccctgagtgatcgactt
caggcacaccacttaacccttctcagcctcagtttccttatctgcaaaaggaaagtgaaa
ggatctgtgaccttatttggctcgccaacaggagaactgaaagctgaagaaaataagagc
ttccccatcacctcagcaaagcatcagtcccccggtgttgaaccagctggtactctggca
gccctaaagcactctcctcccgagctcccacttaagcaaggtaaggtgcattacttctcc
gaactgcaaagcacgcagcagtttctgttcggctttcctctcctggtggttgtagaaatt
cagcaagacaggtctaaaagtggcacaaggatgatgctcaggcgccaggatcactttgtg
gtgggaaaagcagaggctccccactgggtcagccggggcttcatgaagttcgccccagtg
ctacaagaggctgcagaacttggtcaccatcagcaatgcgtcttcaactttatttcctgt
gttgctcttctgggaaaacttttggcaagggaggaatcaaggaaagaaaaaagcattgcc
tgtgaaaacggcattggcaaaacatctgctgagcacacagcactcctgatccctggtgga
ggtggggatgaggaggtctgcaaacaagctctgaagcaggtaaacccactgggcatctgc
agcctgagttttgcggagcccgtctctccattcgatagcatccttatattgcaaacagaa
ggcaccggaaataactgtggtttatccaagaagcagcatcttttttccccttatatttag

>gi568815578r:22481853_22684260|GENSCAN_predicted_peptide_2|114_aa
MVRFRLCLPSQRDTDKKKKKKKKEEEERKKKKKTKKKKKKKKKKKKKKKKKEKKKKKEKK
KKKKKREKKKEKKQKKKKKKKRKRKKKKKKKKKKKKKKKKKLKKKKKKKKKKKN

>gi568815578r:22481853_22684260|GENSCAN_predicted_CDS_2|345_bp
atggttagattcaggttgtgcctccctagccagagggatactgacaaaaaaaagaagaag
aagaagaaagaagaagaagaaaggaagaagaagaagaagacgaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaaggagaagaagaagaagaaggagaagaag
aagaagaagaagaagagggagaagaagaaggagaagaagcagaagaagaagaagaagaag
aagaggaagaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagttgaagaagaagaagaagaagaagaaaaagaagaagaactag

>gi568815578r:22481853_22684260|GENSCAN_predicted_peptide_3|81_aa
IIVIIIIIIIITITIIVTIINIITITNIIIVTIITIIITITIIIITIITITITSIIITTI
IIILYYLIILPHVLTTSEFAK

>gi568815578r:22481853_22684260|GENSCAN_predicted_CDS_3|246_bp
atcattgtcattattatcattatcatcatcatcaccatcaccatcattgtcaccattatc
aatattatcaccatcaccaacatcatcattgtcaccattatcactatcataatcaccatc
accatcatcatcatcacaatcatcaccatcaccatcaccagcattatcatcaccactatc
atcatcatcttatactacctcattatactacctcatgtgcttactacttctgaatttgca
aaataa

>gi568815578r:22481853_22684260|GENSCAN_predicted_peptide_4|254_aa
MPSRWLWGMLAAPRLPALSSASHRSSPNRDSPTDPRGLGARPAALTTSARPIGPGCLAPG
TRAHAAFPEPEHPLRLSQPEPKEGCSAGPRATRGEPEPARQPAARASPRNEERECCFISE
ADLISATPPSKPGPPPDPRMCRSMHCPEENALPPGNFRRPIMFSEDNQPPEASRGSEGGG
RAPQQASGAVDTGAQPKAPGKERRGHQGSPHRKRLPNLPAAKHGCAQKATSRFLQPELRF
TRLLERRGPSPAAA

>gi568815578r:22481853_22684260|GENSCAN_predicted_CDS_4|765_bp
atgccctctcggtggctgtgggggatgcttgcggcccctcgcctgccagcgctgagctca
gcctcacaccggagctcgccaaaccgggacagccccacggacccgcggggactgggggct
cggccggctgctctgacgacctcggcgcgcccgatcggccccggctgcctggccccgggt
acccgggcacacgccgccttcccggagcccgagcacccgctccggctctcgcagcctgag
cccaaggaaggctgctctgcaggtccccgggccactcgcggggagcccgagccagcccgc
cagccagcggctagggcctcacccaggaatgaggaaagggagtgctgctttatttcggaa
gcagatctcatctcggccacccctccctccaagccagggccacctccagacccccggatg
tgtagaagcatgcactgccccgaagaaaacgcgttgcccccaggtaacttcaggcgtccc
atcatgttcagcgaagataaccagccacccgaggcgagccggggctcggagggcggcggg
cgcgctccccagcaggcttcgggtgcggtggacacgggcgcacagcccaaggcaccaggg
aaggagaggaggggccaccaagggtccccacacaggaagaggctccccaacctgcctgcc
gccaagcacggctgtgcgcaaaaggccaccagccgcttcctgcagccagagctaaggttc
actcgcctcttagaaaggcgcggcccctcccctgctgctgcttga

>gi568815578r:22481853_22684260|GENSCAN_predicted_peptide_5|527_aa
MRTRVGPAGLAADRGRPVTVEAPAERSLVSLTPATNSAVVEPHPYSSFNAKLRVCHLACL
LPPSPPILDSMLGAVKMEGHEPSDWSSYYAEPEGYSSVSNMNAGLGMNGMNTYMSMSAAA
MGSGSGNMSAGSMNMSSYVGAGMSPSLAGMSPGAGAMAGMGGSAGAAGVAGMGPHLSPSL
SPLGGQAAGAMGGLAPYANMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITM
AIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKG
SFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEA
AGPASETPAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQQQQAAAHLL
GPPHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMH
YPGYGSPMPGSLAMGPVTNKTGLDASPLAADTSYYQGVYSRPIMNSS

>gi568815578r:22481853_22684260|GENSCAN_predicted_CDS_5|1584_bp
atgaggactcgggtcggtcccgcgggcctggcggccgacagggggcgccctgtcactgtg
gaagcccccgccgagcgctctctggtgtccctgaccccggccaccaatagtgctgtggtg
gagcctcacccttactcaagcttcaatgcgaagctccgtgtctgccatctcgcctgtctt
ctgccaccatcgcccccaattttggacagtatgctgggagcggtgaagatggaagggcac
gagccgtccgactggagcagctactatgcagagcccgagggctactcctccgtgagcaac
atgaacgccggcctggggatgaacggcatgaacacgtacatgagcatgtcggcggccgcc
atgggcagcggctcgggcaacatgagcgcgggctccatgaacatgtcgtcgtacgtgggc
gctggcatgagcccgtccctggcggggatgtcccccggcgcgggcgccatggcgggcatg
ggcggctcggccggggcggccggcgtggcgggcatggggccgcacttgagtcccagcctg
agcccgctcggggggcaggcggccggggccatgggcggcctggccccctacgccaacatg
aactccatgagccccatgtacgggcaggcgggcctgagccgcgcccgcgaccccaagacc
tacaggcgcagctacacgcacgcaaagccgccctactcgtacatctcgctcatcaccatg
gccatccagcagagccccaacaagatgctgacgctgagcgagatctaccagtggatcatg
gacctcttccccttctaccggcagaaccagcagcgctggcagaactccatccgccactcg
ctctccttcaacgactgtttcctgaaggtgccccgctcgcccgacaagcccggcaagggc
tccttctggaccctgcaccctgactcgggcaacatgttcgagaacggctgctacctgcgc
cgccagaagcgcttcaagtgcgagaagcagctggcgctgaaggaggccgcaggcgccgcc
ggcagcggcaagaaggcggccgccggagcccaggcctcacaggctcaactcggggaggcc
gccgggccggcctccgagactccggcgggcaccgagtcgcctcactcgagcgcctccccg
tgccaggagcacaagcgagggggcctgggagagctgaaggggacgccggctgcggcgctg
agccccccagagccggcgccctctcccgggcagcagcagcaggccgcggcccacctgctg
ggcccgccccaccacccgggcctgccgcctgaggcccacctgaagccggaacaccactac
gccttcaaccacccgttctccatcaacaacctcatgtcctcggagcagcagcaccaccac
agccaccaccaccaccaaccccacaaaatggacctcaaggcctacgaacaggtgatgcac
taccccggctacggttcccccatgcctggcagcttggccatgggcccggtcacgaacaaa
acgggcctggacgcctcgcccctggccgcagatacctcctactaccagggggtgtactcc
cggcccattatgaactcctcttaa

>gi568815578r:22481853_22684260|GENSCAN_predicted_peptide_6|203_aa
MWESLEALIDLLNGFDQKPDNDMNNKVQAKSLVAFCHRPRDLWNFELERGHLVYLVEEIS
KQQSIQDVTGAAKGIRFYKESKAKWFKSNSSSFDSKGSGTGHMGAQLGNISQTPLQLDAD
VTTCSEWNELCQEAALQRKANSGLPSAEIRKQNSIEEVSILVSPSKMEASTQMPYDWLLL
STGIHSTSPENTDPATDINGGDE

>gi568815578r:22481853_22684260|GENSCAN_predicted_CDS_6|612_bp
atgtgggaaagtttggaagctcttatagacttgttgaatggttttgaccaaaagcctgat
aatgatatgaacaataaggtccaggcaaagagcctggtggcattttgccaccgccctaga
gatttgtggaactttgaacttgagagaggtcatttagtgtatctggtggaagaaatttct
aagcagcaaagcattcaagatgtgaccggtgctgctaaaggcattcggttttataaggaa
agcaaagcaaaatggtttaagagcaactcgtcttcatttgacagtaagggatctggaact
ggtcacatgggtgcccaactgggtaacatctcccagactcccttgcagttagatgcagat
gtgaccacatgttctgagtggaatgagctgtgccaagaggcagcccttcagaggaaggcc
aactcagggctgcccagtgcagagataaggaaacagaactccatagaggaggtcagcatc
ctggtcagtccaagcaagatggaggcctctacccagatgccttatgactggctgctgctg
agcactggcatccactcaacgtccccagagaacacagaccccgccacagacatcaatggt
ggagatgaatag

>gi568815578r:22481853_22684260|GENSCAN_predicted_peptide_7|69_aa
MERLPANHPELQRGVEQSSSQSSEGTSPAHTLISDFQHRHGITEPFLATLGSVTLLQRIA
LRLLELLTI

>gi568815578r:22481853_22684260|GENSCAN_predicted_CDS_7|210_bp
atggaaaggttgcctgcaaaccacccggagctgcagagaggcgtggaacagtcttcctca
cagtcctcggaaggaaccagccctgcccacaccttgatctcagacttccagcatcggcac
ggcatcaccgagccttttcttgctacactcggctctgtgactctgcttcagaggatagcc
cttaggctgctggagctgctgacaatatag