GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:29:08

Sequence gi568815578f:56259006_56466284 : 207279 bp : 43.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2140   2193   54  1  0   69   97    35 0.355   0.59
 1.02 Intr +   5151   5333  183  0  0  116   84    69 0.758   8.20
 1.03 Intr +  16427  16635  209  2  2   30   35   117 0.454  -0.68
 1.04 Term +  17136  17287  152  1  2   84   43   137 0.860   6.87
 1.05 PlyA +  18822  18827    6                               1.05

 2.00 Prom +  34539  34578   40                              -3.46
 2.01 Init +  36640  36650   11  0  2   74  100     6 0.200   0.36
 2.02 Intr +  51689  51747   59  2  2  102  100    10 0.065   2.13
 2.03 Intr +  58101  58251  151  1  1   76   88    84 0.372   6.42
 2.04 Term +  63461  63575  115  2  1   93   54    94 0.338   4.54
 2.05 PlyA +  64075  64080    6                               1.05

 3.00 Prom +  65372  65411   40                              -2.76
 3.01 Init +  68722  68752   31  0  1   63  116    -5 0.072  -0.30
 3.02 Term +  78569  78789  221  0  2   64   54   146 0.924   6.00
 3.03 PlyA +  79374  79379    6                               1.05

 4.00 Prom +  80216  80255   40                              -4.96
 4.01 Sngl +  81018  82067 1050  2  0   33   42   455 0.763  32.56
 4.02 PlyA +  82154  82159    6                               1.05

 5.02 PlyA -  83378  83373    6                               1.05
 5.01 Sngl -  85386  84934  453  0  0   83   52   166 0.934   8.92
 5.00 Prom -  88393  88354   40                              -5.26

 6.00 Prom +  92448  92487   40                              -5.96
 6.01 Init + 100001 100186  186  1  0  110  115   174 0.999  19.36
 6.02 Intr + 106082 106257  176  1  2   93  116    70 0.994   9.04
 6.03 Term + 107066 107282  217  2  1  128   39   212 0.861  16.92
 6.04 PlyA + 108905 108910    6                               1.05

 7.06 PlyA - 110404 110399    6                               1.05
 7.05 Term - 110850 110788   63  0  0   69   49    27 0.439  -5.21
 7.04 Intr - 111654 111480  175  2  1   83   94   130 0.578  13.04
 7.03 Intr - 114551 114403  149  2  2   25   91    48 0.404  -2.17
 7.02 Intr - 122566 122428  139  0  1   57   93    72 0.767   5.07
 7.01 Init - 123536 123472   65  2  2   56   68    58 0.558   1.23
 7.00 Prom - 125464 125425   40                              -7.76

 8.00 Prom + 125542 125581   40                              -4.56
 8.01 Init + 127313 127317    5  1  2   74   71     0 0.078  -3.63
 8.02 Intr + 132519 132613   95  0  2   79   34   118 0.243   5.11
 8.03 Intr + 136516 136716  201  2  0  117    1   304 0.744  23.86
 8.04 Intr + 138202 138479  278  2  2   85   83   170 0.980  13.44
 8.05 Intr + 138639 138836  198  2  0   94   91    80 0.997   8.45
 8.06 Intr + 139962 140352  391  2  1   79   79   114 0.504   3.90
 8.07 Term + 144463 144722  260  2  2   60   52   227 0.494  12.01
 8.08 PlyA + 145231 145236    6                               1.05

 9.00 Prom + 151951 151990   40                              -5.86
 9.01 Init + 153454 153489   36  0  0   96  113    25 0.201   5.95
 9.02 Intr + 178159 178581  423  0  0  112  101   153 0.627  13.06
 9.03 Intr + 186952 186996   45  0  0  104  105    58 0.636   7.71
 9.04 Intr + 191594 191674   81  1  0   77   84    78 0.980   6.13
 9.05 Intr + 192814 194124 1311  0  0   82  109   953 0.358  84.49
 9.06 Term + 199335 199742  408  2  0  101   55   521 0.953  45.32
 9.07 PlyA + 200312 200317    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_1|199_aa
XFPICNRNGSCTYQLTLGRSSLGSFHMEQQAFWELKAARRTGAQRACLGTESDMAGESDM
PRHGERRTLYGIPRALDGFLIGGYPAEEWQMDFTHMPKTKGIQYLLVWVDTFTNLVEAFP
CQTEKASEVIKVRINKMMPCFGLPKYVHSAVKVTEIDSCIPYTRVKAWETNEIASVGPGE
HLKYWSEEIGDFELKNHQD

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_1|600_bp
nntttccccatctgtaacaggaatggttcttgtacttaccagctgacactgggcaggagc
agcctgggcagtttccacatggagcaacaggcattctgggaactgaaagcagctcgtagg
actggagcacagagggcttgtttaggaacagagagtgacatggctggagagtcagacatg
cctcgtcatggggaaagaagaactttatatggcatcccgagggctctggatggatttcta
ataggaggctacccagcggaagagtggcagatggatttcacccatatgccaaagacaaag
ggcatccagtacctcctagtatgggtagataccttcactaacttggtagaagcatttcca
tgtcaaacagagaaagcctctgaggtgataaaagtacgcattaacaaaatgatgccttgc
tttggacttcctaagtatgtccacagtgcagtaaaggtcactgaaatagattcttgtatt
ccttatactcgagttaaggcctgggaaaccaatgaaattgcctctgttggtccaggagag
cacctaaagtactggagtgaggaaatcggggacttcgagctaaaaaatcaccaagattag

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_2|111_aa
MNKRSFCRHPEMKGGLSLAFRTEEPIQMRRNQKTNPGNMTKQGSLTPPESHMSSPAMDPN
QKEIPDLPEKEFRRCQYNDLCKLYQLHGSPDFSKMSTVGQNHLLFLSTLTQ

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_2|336_bp
atgaacaaaaggtccttctgcagacacccagagatgaagggagggctgtcccttgccttt
cgcacagaagagcctatccaaatgagaaggaaccagaaaaccaaccctggtaatatgaca
aaacaaggctctttgacacccccagaaagtcacatgagttcaccagcaatggatccaaac
caaaaagaaatccctgatttacctgaaaaagaattcaggagatgccagtacaacgacctc
tgcaagttgtaccaactacatgggtctccagacttttccaaaatgtctactgtgggacaa
aatcaccttctcttcctctccacgctcacacagtga

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_3|83_aa
MLKSKGQSKKGLQLLASPENDFGKLTEVGFRRSVITNFSKLKEHVQTHRTQAKNLEKRLD
EWLTTINSVEKTLSDLTELKTMA

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_3|252_bp
atgctgaaaagcaagggtcaaagtaaaaaaggattgcagctccttgccagcccagagaat
gactttggcaagctgacagaagtaggcttcagaagatcggtaataacaaacttctccaag
ctaaaggagcatgttcaaacccatcgcacacaggctaaaaaccttgaaaaaaggttagat
gaatggctaactacaataaacagtgtagaaaagaccttaagtgacctgacagagctgaaa
accatggcatga

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_4|349_aa
MKKREKNQIDAIKNDKGDITTNPTEIQTTIREYYKHLHANKLENLKEMHKFPDTYIHPRL
NQEEVESLNRPTTGSEIESIINRLPTKKSPGPDGFTAEFYKRYKEEVIPLLLKLFQSIEK
EGILSNSFYEASIILIPKPGRDTTKKENFRPISLVNIDVKILNKILANRIQQHIKKLIHH
DQVGFIPGMQGWFNVRKSIHVIHHINRTNNKNHMIISIDAEKAFDKIQQPFMLKILNKLG
IDGTYLKIIKAIYDKTTANIILNGQKLDAFHLKTSTRQGYPFSQLLFNMVLEVLAGAIRQ
EKEIKSIQLGREEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKLSG

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_4|1050_bp
atgaagaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcacc
accaatcccacagaaatacaaactactatcagagaatactataaacatctccatgcaaat
aaactagaaaatctaaaagaaatgcataaattcccggacacatacatccacccaagacta
aaccaggaagaagttgaatctctgaatagaccaacaacaggctctgaaattgagtcaata
attaataggctaccaaccaaaaaaagtccaggaccagatggattcacagccgaattctac
aagaggtacaaagaggaggtgataccactccttctgaaactattccaatcaatagaaaaa
gagggaatcctctctaactcattttatgaggccagcatcatcctgataccaaagcctggc
agagacacaacaaaaaaagagaattttagaccaatatccctggtgaacatcgatgtgaaa
atcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccat
gatcaagtgggcttcatccctgggatgcaaggctggttcaacgtacgcaaatcaatacac
gtaatccatcacatcaacagaaccaataacaaaaaccacatgattatctcaatagatgca
gaaaaggccttcgacaaaattcaacagcccttcatgctaaaaattctaaataaactaggt
attgatggaacatacctcaaaataataaaagctatttatgacaaaaccacagccaatatc
atactgaatgggcaaaaactggacgcattccatttgaaaaccagcacacgacaaggatac
cctttctcacaactcctattcaacatggtattggaagttctggctggggcaatcaggcaa
gagaaagaaataaagagtattcaattaggaagagaggaagtcaaactgtccctgtttgca
gatgacatgattgtatatttagaaaaccccattgtgtcagcccaaaatctccttaagctg
ataagcaacttcagcaaactctcaggataa

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_5|150_aa
MGARVDSWDSTRRGRLPEPRLAWELSFLQTRARSFKRFPSAFPARSEAESCALVQEGNLD
LMVAGGCRARPRKRALGDQGSAGVQLGGERGSWRGEERVPAPDDLAPGGLAHEVAPQALP
RLRPRKGRRSPRLRGFAESQRQLLKTASGN

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_5|453_bp
atgggggcaagggtggattcctgggattctacccgacgtgggaggcttcctgagccacgg
ctggcctgggagctgagtttcttgcagacccgtgcccggtcattcaaacggttcccatca
gcatttccagcacgctccgaggctgagagttgcgcgctcgtgcaggaaggcaatctggat
ctgatggttgcagggggctgcagagctcggcctcggaagcgggcgttaggggatcagggc
tccgcgggcgtccagcttggaggtgagcgggggtcctggcggggcgaggagcgggtcccg
gcaccggatgaccttgcaccaggcggcctcgcccacgaggtggcgccgcaggctctgcca
aggctccgaccgcgcaaggggaggcgcagcccaagacttcgaggtttcgcggagtcccaa
aggcagctcctcaagacagcctcgggcaactga

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_6|192_aa
MAGLLALLGPAGRVGARVRPRATWLLGATAPCAPPPLALALLPPRLDARLLRTARGDCRG
HQDPSQATGTTGSSVSCTEEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVS
SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFR
KVGFFKPPAAKP

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_6|579_bp
atggccgggttgctggcgttgctgggtccggcaggcagggtgggcgcccgggtccggcct
cgcgccacctggctcctgggcgccaccgccccctgcgccccgccgcccctggccctggcc
ctgctcccgcccaggctagacgcccggctgctccgcacggcgcgcggggactgccgcggc
caccaggaccccagccaggccacggggacaacaggcagcagcgtcagctgcacagaggag
aaaaagcaaagcaagtcacagcaactgaaaaagatttttcaagagtatggcactgttggc
gtgtcattgcacattggaatctcattaatttccttgggcatattttacatggttgtgtca
agtggtgtggacatgcctgcaatcctgctgaaactcggatttaaagagtccctggtacag
tcaaaaatggcagcaggcacaagtaccttcgtggtggcctatgcaatccacaagctgttt
gcgccagtgagaatcagcattacgctagtctctgtgcccttgattgtcagatattttcga
aaagtgggattttttaaacctccagctgcaaaaccttaa

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_7|196_aa
MAPLILRYAGIASSYLQVDYGWHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK
FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT
TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISREANP
EPGCGESDHSALTPIS

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_7|591_bp
atggcaccccttattctgaggtatgcaggaattgcgagcagctacctgcaggttgactac
ggctggcatcctaatattcttagactgtatggttatttccatgatgctaccagagtctac
ctaattctggaatatgcaccacttggaacagtttatagagaacttcagaaactttcaaag
tttgatgagcagagaactgctacttatataacagaattggcaaatgccctgtcttactgt
cattcgaagagagttattcatagagacattaagccagagaacttacttcttggatcagct
ggagagcttaaaattgcagattttgggtggtcagtacatgctccatcttccaggaggacc
actctctgtggcaccctggactacctgccccctgaaatgattgaaggtcggatgcatgat
gagaaggtggatctctggagccttggagttctttgctatgaatttttagttgggaagcct
ccttttgaggcaaacacataccaagagacctacaaaagaatatcacgggaggcaaatcca
gagcctggctgtggggaaagtgaccactctgccctgaccccgatcagttaa

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_8|475_aa
MRDSDLPGSRWSYMFNKHCKLSRYNCSKVYGLRTGRETVFLFSKMYRTKVGLKDRQQLYK
LIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVA
PGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILD
TERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYT
LKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCN
PQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSK
NSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTI
SLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRRSTTD

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_8|1428_bp
atgagagattctgatttaccgggctctcggtggagctatatgtttaacaagcactgcaag
ttatcccggtacaactgctccaaggtctacggtctgagaactggcagggaaactgtcttc
cttttctccaagatgtacagaaccaaagtgggcttgaaggaccgccagcagctctacaag
ctgatcattagccagctgctatatgacggctacatcagcatcgccaatggcctcatcaat
gaaatcaagcctcagtctgtgtgtgcaccctcggagcagctcctgcatctcatcaaactc
ggaatggaaaacgatgacaccgcagttcagtatgcaattggtcgttcagatactgttgcc
cctggcacagggattgacctggaatttgatgcagatgttcagactatgtccccagaggct
tctgagtacgaaacatgctatgtcacatcacataaaggaccatgccgtgtagctacctat
agtagagatggacagttaatagctactgggtctgctgatgcttcgataaagatacttgac
acagagaggatgttggccaaaagtgccatgccaatagaggtcatgatgaatgagaccgca
caacaaaatatggaaaaccacccagtgattcgaactctttatgaccatgtggatgaagtc
acgtgccttgctttccacccaacagaacagatcctggcttctggttcaagggattatact
cttaaattatttgattattccaaaccatcagcaaaaagagccttcaaatacattcaggaa
gctgaaatgttacgttccatctcttttcatccttctggagactttatacttgtcggaact
cagcatcctactcttcgcctttatgatatcaacacctttcaatgttttgtctcttgcaat
cctcaagatcaacacaccgatgctatatgttccgttaattacaattctagtgccaatatg
tacgtaactggaagcaaggacggctgcatcaaattatgggatggtgtttcaaatcgatgc
atcacaacttttgagaaagcacatgacggtgctgaagtttgttctgccattttttccaaa
aattctaaatacattctctcaagtggaaaagactctgtagctaaactttgggaaatatca
acgggacgaacactggtcagatacacgggcgcgggtttaagtggacgccaggtgcaccgg
acacaggctgtgtttaaccacaccgaggactatgtgttgctgcccgacgagaggacgatc
agtctttgctgctgggactcgaggacagccgagcggagaaacctgctgtcgttggggcac
aacaatattgtacgctgcatagtgcactcccccaccaaccccgggttcatgacgtgcagc
gatgacttcagagcgcggttttggtaccggagatcgaccactgactga

>gi568815578f:56259006_56466284|GENSCAN_predicted_peptide_9|767_aa
MKGTGIMDCAPKALLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQ
GLAPANRLQILTEVAADRPCPPFLRGLEEAPASSEETYQVPTLPRPPTPGPVYEQMRSWA
EGPQPPTAQVYEFPDPPTSARIICEKTLSFPKQVYDVPTQHRGPVVLKEPEKQQLYDIPA
SPKKAGLHPPDSQASGQGVPLISVTTLRRGGYSTLPNPQKSEWIYDTPVSPGKASVRNTP
LTSFAEESRPHALPSSSSTFYNPPSGRSRSLTPQLNNNVPMQKKLSLPEIPSYGFLVPRG
TFPLDEDVSYKVPSSFLIPRVEQQNTKPNIYDIPKATSSVSQAGKELEKAKEVSENSAGH
NSSWFSRRTTSPSPEPDRLSGSSSDSRASIVSSCSTTSTDDSSSSSSEESAKELSLDLDV
AKETVMALQHKVVSSVAGLMLFVSRKWRFRDYLEANIDAIHRSTDHIEESVREFLDFARG
VHGTACNLTDSNLQNRIRDQMQTISNSYRILLETKESLDNRNWPLEVLVTDSVQNSPDDL
ERFVMVARMLPEDIKRFASIVIANGRLLFKRNCEKEETVQLTPNAEFKCEKYIQPPQRET
ESHQKSTPSTKQREDEHSSELLKKNRANICGQNPGPLIPQPSSQQTPERKPRLSEHCRLY
FGALFKAISAFHGSLSSSQPAEIITQSKLVIMVGQKLVDTLCMETQERDVRNEILRGSSH
LCSLLKDVALATKNAVLTYPSPAALGHLQAEAEKLEQHTRQFRGTLG

>gi568815578f:56259006_56466284|GENSCAN_predicted_CDS_9|2304_bp
atgaagggaacaggcatcatggactgtgcgcccaaggcactcctggccagggcactttat
gacaactgccctgactgctctgacgagctggctttcagcagaggggacatcctgaccatt
ctggagcaacacgtgccagaaagcgagggttggtggaagtgtttgctccatgggaggcaa
ggcctggcccctgccaaccgcctccaaatcctcacggaggtcgctgcagacaggccgtgc
cccccattcctgagaggcctggaagaagctcctgccagctcagaggagacctatcaggtg
cccactctaccccgccctcccactccaggccccgtttatgagcagatgaggagttgggcg
gaggggccccagccccctactgcccaagtctatgaattccccgaccctcccaccagtgcc
agaatcatctgtgaaaagactctcagctttccaaaacaggtgtatgacgtgcctacccag
caccggggccccgtggtcctgaaggagccagagaagcagcagttatatgacataccagcc
agccccaagaaggcaggactccatcccccagacagccaagcaagtgggcagggtgttccc
ctgatatcagtgactaccttaagaagaggcggttacagcacattaccaaatcctcagaaa
tcggaatggatttatgacactccagtgtctccaggaaaggccagcgtcagaaacacgcct
ctcaccagctttgcggaagaatcaaggccccacgctctccccagttccagctccactttc
tacaatcctccaagtggcagatccaggtccctcactccacaactgaataacaatgtgccc
atgcagaaaaaactcagccttccagaaattccttcttatggctttcttgtacccagaggc
acatttcctttggatgaagatgtcagctacaaggttccttcaagctttctgattccccga
gtggaacagcagaacaccaagcccaatatttatgacatccctaaagcaacgtcgagtgtt
tctcaggctgggaaggagctggagaaagccaaggaggtgtcagagaattccgcgggccat
aattcctcatggttctccagacggacaacttccccatctcctgaaccggacagattatca
ggttccagttctgacagcagagctagcatcgtttcctcgtgctccaccacatccaccgac
gactcctccagctcttcctcggaggagtcagcaaaggagctctccttggacctggatgtg
gccaaggagacagtgatggctctgcagcacaaggtggtcagctctgtcgctggcctgatg
ctctttgtcagcaggaagtggagattccgagactatctggaggccaacattgatgcaatc
cacaggtccactgatcacatagaagaatctgtaagagaatttctggattttgcccgagga
gtccatgggactgcctgtaacctcactgacagtaaccttcagaacagaattcgggaccag
atgcagaccatctccaactcctaccgcatcctgcttgaaacaaaggaaagcttggataat
cgcaattggcctctggaagttcttgtgactgacagtgtccagaacagcccagatgacctt
gagaggtttgtcatggtggcacggatgcttccagaagacatcaagaggtttgcctccatt
gtcattgccaatggaaggctcctttttaagcggaactgtgaaaaggaagagactgtgcag
ttgaccccaaatgcagaatttaagtgtgaaaaatacatccagcctccccaaagagaaact
gaatcacaccaaaagagtaccccttccactaagcaaagggaagatgaacactcttctgaa
ctattaaagaaaaatagggcaaatatctgtggacagaatcctggccctcttatacctcag
ccttcgagtcaacagactcctgagaggaaaccccgcttatctgaacactgccggctctac
tttggggcgctcttcaaagccatcagcgcatttcacggcagcctcagcagcagccagccc
gcggagatcatcactcagagcaagctggtcatcatggtgggacagaagctggtggacacg
ctgtgcatggagacccaggagagggacgtgcgcaacgagatcctccgtggcagcagtcac
ctctgcagcctgctcaaggacgtagcgctggccactaagaatgccgtgctcacgtacccc
agccctgccgcgctggggcacctccaggcggaggctgagaagctggagcaacacacgcgg
cagttcagagggacactgggatga