GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:00:43

Sequence gi568815578f:44801534_45006435 : 204902 bp : 43.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1566   1561    6                               1.05
 1.04 Term -   8418   8321   98  1  2   92   47    18 0.305  -3.77
 1.03 Intr -   9098   8642  457  2  1   84  115   448 0.595  39.89
 1.02 Intr -  10191  10104   88  2  1   73   42    45 0.303  -1.63
 1.01 Init -  20687  20536  152  2  2   72   99    89 0.510   5.96
 1.00 Prom -  26145  26106   40                              -4.66

 2.00 Prom +  31839  31878   40                              -3.76
 2.01 Init +  34927  35027  101  0  2   68   81    64 0.377   3.43
 2.02 Intr +  36461  36621  161  2  2   59   51    94 0.090   2.43
 2.03 Term +  55286  55500  215  0  2  -19   51   412 0.727  24.19
 2.04 PlyA +  55703  55708    6                               1.05

 3.00 Prom +  62446  62485   40                              -1.86
 3.01 Init +  62956  62965   10  0  1   83   94     5 0.350   1.40
 3.02 Intr +  84145  84353  209  2  2  -15  113   113 0.218   2.30
 3.03 Intr +  84758  84827   70  1  1  122   52     8 0.198  -0.65
 3.04 Intr +  86115  86209   95  1  2   42   99    51 0.315   1.28
 3.05 Intr +  99998 100300  303  1  0  112   99   347 0.909  34.99
 3.06 Intr + 102460 102583  124  0  1   62  106    86 0.989   7.96
 3.07 Intr + 103435 103598  164  2  2   77   93     9 0.962  -0.01
 3.08 Intr + 104468 104563   96  1  0   36   93    98 0.948   5.31
 3.09 Term + 104849 104905   57  1  0  132   35    46 0.953   1.39
 3.10 PlyA + 104972 104977    6                              -0.45

 4.00 Prom + 106162 106201   40                              -1.76
 4.01 Init + 108611 108803  193  1  1  100  101   392 0.903  40.83
 4.02 Intr + 111127 111336  210  2  0  101   40   328 0.905  28.18
 4.03 Intr + 115122 115338  217  1  1   65   65   266 0.467  19.56
 4.04 Intr + 117373 117512  140  1  2   64   60   244 0.969  19.31
 4.05 Intr + 117650 117744   95  0  2   88   97   133 0.993  13.88
 4.06 Intr + 120061 120198  138  0  0  111   94   271 0.971  30.66
 4.07 Intr + 122628 122723   96  2  0   49  100   146 0.926  12.11
 4.08 Intr + 128927 129193  267  1  0  116   66   326 0.833  30.93
 4.09 Intr + 130809 130899   91  2  1   96   76   -38 0.146  -4.63
 4.10 Intr + 131539 131652  114  2  0   66   95    29 0.087   1.82
 4.11 Intr + 133858 133964  107  2  2  102   90    15 0.114   3.03
 4.12 Intr + 135104 135197   94  1  1   36   97    87 0.077   3.94
 4.13 Intr + 136528 136658  131  2  2   16  121   139 0.886  10.41
 4.14 Intr + 136966 137059   94  0  1   54   89     0 0.453  -3.76
 4.15 Intr + 137141 137215   75  0  0   97   94    70 0.493   7.99
 4.16 Intr + 137593 137708  116  2  2  113   31     5 0.435  -2.53
 4.17 Term + 139173 139235   63  2  0  121   35   104 0.562   6.29
 4.18 PlyA + 139859 139864    6                               1.05

 5.09 PlyA - 140625 140620    6                               1.05
 5.08 Term - 141680 141576  105  2  0   99   42    87 0.975   3.61
 5.07 Intr - 142046 141920  127  1  1   98   93   114 0.998  13.58
 5.06 Intr - 147344 147197  148  0  1   68   70   180 0.989  13.49
 5.05 Intr - 150469 150300  170  0  2  100   83   104 0.999  10.69
 5.04 Intr - 153687 153535  153  2  0   98   99   254 0.962  26.69
 5.03 Intr - 154952 154853  100  0  1   91   88    76 0.999   7.07
 5.02 Intr - 159096 158674  423  1  0   39  102   367 0.076  27.04
 5.01 Init - 162674 162506  169  2  1   82   36   105 0.049   4.41
 5.00 Prom - 163263 163224   40                              -5.96

 6.00 Prom + 164332 164371   40                              -7.56
 6.01 Init + 165036 165070   35  2  2  104   93     3 0.241   1.91
 6.02 Intr + 165655 165738   84  1  0   57   92    54 0.165   1.64
 6.03 Intr + 170545 170625   81  1  0   91   96   119 0.995  11.75
 6.04 Intr + 176910 177038  129  0  0   74  103   136 0.996  13.51
 6.05 Intr + 180296 180410  115  2  1   98   90    68 0.987   8.45
 6.06 Intr + 185599 185763  165  0  0   74   98    42 0.927   3.96
 6.07 Intr + 193557 193724  168  2  0  103   90   155 0.964  17.34
 6.08 Intr + 195636 195773  138  2  0   65   80    46 0.806   2.16
 6.09 Intr + 198859 198987  129  0  0   80   70   146 0.988  12.89
 6.10 Intr + 199634 199820  187  1  1   87   78   240 0.998  22.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 158800 158674  127  1  1   74  102   298 0.841  30.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:44801534_45006435|GENSCAN_predicted_peptide_1|264_aa
MPAMKIYTQGLLGKALAGCGVIWFQETKRGGGFIEGMQENVKEVMGQKIVRWLHKEVCEQ
LRRLFDIWGLIRWAGTLTSQRRPLPRRHGLAAAPLQARLALPAGGAADQSALRRHRRRHR
RRRRRRQQHSAPRAPRAASSWPARRPRRARQPRSGASARPRAAATTPRAVLRVKNGAAKL
PKPPAAAAAAAAEAPGAGAGMERSQSRLSLSASFEALAIYFPCMNSFDDEDAGGPFGSPG
PISLLTRAYWRPLASSLEPTCHPP

>gi568815578f:44801534_45006435|GENSCAN_predicted_CDS_1|795_bp
atgcctgccatgaaaatctatacgcaggggttgcttggaaaagctctggctgggtgtggg
gttatttggtttcaagaaacaaaacgaggagggggttttattgaaggaatgcaggagaat
gtcaaagaggtcatgggccagaagatagtcagatggcttcataaagaggtgtgcgagcag
ctgagaaggttgtttgacatctggggcctgattaggtgggcagggaccctcacgtcccag
cggcgccccctcccccggcggcacggattggctgcggcgccgctccaagcccgcctcgcg
ctgccggcggggggcgccgcggaccagagcgcgctgcgccgccaccgccgccgccaccgc
cgccgccgccgccgccgccagcagcacagcgcgcctcgggctccgcgcgccgccagctcc
tggcccgcccgccggccccgccgcgcccgccagccccgcagcggagcctcggcccggccc
cgggccgccgccaccacgccgcgcgccgtactccgcgtcaagaatggggcggccaagctg
cccaagccgcccgccgccgccgccgccgccgcggccgaggcgcccggcgccggcgcgggc
atggagcgctcgcagagccgcctcagtctgtccgcctccttcgaggcgctcgccatctac
ttcccgtgcatgaactccttcgacgacgaggacgcaggtgggccctttgggtcgccagga
cccatctccctcctcacccgcgcctattggaggccccttgcctcgtccctggagccgacc
tgccaccctccctga

>gi568815578f:44801534_45006435|GENSCAN_predicted_peptide_2|158_aa
MVVVSVTIIGGASDYGYQNSLAEMLVIGGAKDHRPSLPGKASLLCTGAARLADAAHSAKA
VEEPELYLNFSESTQTQPPVLWLAEGTEEEGRGRGGGGGEEEEEEEKKKKKKKKKKKKKK
KKKKKKKKKRKKKKEEEEEKKKGRGRGNGKRKRKRKQL

>gi568815578f:44801534_45006435|GENSCAN_predicted_CDS_2|477_bp
atggtggttgtgagtgtgacgattattggaggggctagcgattatgggtaccaaaattcc
ttggcagagatgctggttattggaggggctaaagatcacagacctagccttccaggaaaa
gcttccctgctctgcaccggggctgccagacttgcagatgctgcacactcagcaaaagca
gtggaggagcctgagctatatttgaacttctctgagagcacacagacacagccccctgtg
ctctggctggcggaggggactgaagaagaaggaagaggaagaggaggaggaggaggagaa
gaagaggaagaagaagaaaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaggaagaagaagaaggaggaggaggaggagaag
aagaaggggagggggagggggaatgggaagaggaagaggaagaggaagcagctctga

>gi568815578f:44801534_45006435|GENSCAN_predicted_peptide_3|375_aa
MAEGPERKWRSERKWSYRHRRRRFRSRGSRRRRRRCSHCRHRCRRLSSGLRKEEVISLGA
SLGRVFVPCSPPTKLKFNQTRMSFLAPVPVFGSSWMSRVSRDLGRYKKCILPIRLWIEKQ
EEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYK
NVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNA
TQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLG
LALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWT
SENQGDEGDAGEGEN

>gi568815578f:44801534_45006435|GENSCAN_predicted_CDS_3|1128_bp
atggcagaaggaccggagcggaagtggcgatcggagcggaagtggagctaccgccaccgc
cgccgccgattccggagccggggtagtcgccgccgccgccgccgctgcagccactgcagg
caccgctgccgccgcctgagtagtgggcttaggaaggaagaggtcatctcgctcggagct
tcgctcggaagggtctttgttccctgcagccctcccacgaaattaaaatttaatcaaacg
cggatgagttttctagccccagtccccgtgtttggctcctcctggatgagcagagtctcc
agagatttgggccgctacaaaaagtgcattttgcccattcggctgtggatagagaagcag
gaagagcactggacttggagtcagggaatgacaatggataaaagtgagctggtacagaaa
gccaaactcgctgagcaggctgagcgatatgatgatatggctgcagccatgaaggcagtc
acagaacaggggcatgaactctccaacgaagagagaaatctgctctctgttgcctacaag
aatgtggtaggcgcccgccgctcttcctggcgtgtcatctccagcattgagcagaaaaca
gagaggaatgagaagaagcagcagatgggcaaagagtaccgtgagaagatagaggcagaa
ctgcaggacatctgcaatgatgttctggagctgttggacaaatatcttattcccaatgct
acacaaccagaaagtaaggtgttctacttgaaaatgaaaggagattattttaggtatctt
tctgaagtggcatctggagacaacaaacaaaccactgtgtcgaactcccagcaggcttac
caggaagcatttgaaattagtaagaaagaaatgcagcctacacacccaattcgtcttggt
ctggcactaaatttctcagtcttttactatgagattctaaactctcctgaaaaggcctgt
agcctggcaaaaacggcatttgatgaagcaattgctgaattggatacgctgaatgaagag
tcttataaagacagcactctgatcatgcagttacttagggacaatctcactctgtggaca
tcggaaaaccagggagacgaaggagacgctggggagggagagaactaa

>gi568815578f:44801534_45006435|GENSCAN_predicted_peptide_4|746_aa
MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVEDEGCTAGMQRLVVITFAIPFYLNPLSVLFLSFLPVAQVACDEHGSRGFG
FVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVD
VDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL
YAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVIT
SAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQ
YMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAYYGCGPVTPTQPAPRWTSQPPR
PSCASMVRPPVVPRRPPAHISSVRQASTQVPRTVPHTQRVANIGTQTTGPSGVGCCTPGR
PLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHT
QLAGKITGMLLEIDNSELLLMLESPESLHAKVTDRAMGSCKQWWMGGFHRNPVDGGGSCI
QDDRRGSGRAAGTPGYGAAEGVHALKPEKEILASMAAKRTVFLALSPKALQTLTYFPISL
YLYLGSRKSTNMTSYQIQIHYHYLVE

>gi568815578f:44801534_45006435|GENSCAN_predicted_CDS_4|2241_bp
atgaacgccagcggttctggctacccgcttgcctcgctttacgtgggcgatctgcacccc
gacgtgaccgaggccatgctctatgagaagttctctcccgccggccccatcctgtccatc
cgcgtgtgccgcgatgtagccacccggcgctcgctgggctacgcctacatcaacttccag
cagcccgcggacgcggagcgggcactggacacaatgaactttgagatgctcaaaggccag
cctattcgcatcatgtggtcccagcgagacccaggacttcgcaagtcaggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggctttatatgataccttctcc
acctttgggaacatcctctcttgcaaggtagaggatgaagggtgcacagcaggcatgcag
agactggtcgtgatcacctttgccattcctttctacctgaaccctctgtcagtactcttc
ctgtccttcctccctgtggcccaggtggcgtgtgacgagcatggctcccggggtttcggc
tttgtccattttgagacccatgaggccgcacagcaggccatcaacaccatgaatgggatg
ctgctgaatgaccgcaaagtctttgtgggtcacttcaagtctcgacgggagcgggaggcg
gagctgggggcgcgggccctggagttcaccaacatctacgtgaagaacctcccggtggat
gtggacgagcaaggcctgcaggacctcttctcccagtttgggaaaatgctgagtgtgaag
gtgatgagggacaacagcggccactcgcggtgctttggctttgtcaactttgagaagcat
gaggaagcccagaaggccgtggtccatatgaacgggaaggaggtgagcgggcggctgctg
tacgcgggccgggcccaaaagcgcgtggagcggcagaatgaactgaagcgcaggtttgag
cagatgaagcaggaccggctgaggcgttaccagggtgtgaacttgtatgtgaagaatctg
gacgactccattgatgacgacaaactgaggaaagagttctctccctatggagtaattacc
agtgcgaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttttcc
tccccagaagaggcgacaaaggccgtgacagagatgaacgggcgcatcgtgggcaccaag
ccactctacgtggcactggcccagcgcaaagaggagcggaaggccatcttgaccaaccag
tacatgcagcgcctctccaccatgcggaccctgagcaaccccctcctgggctcctttcag
cagccctccagctacttcctgcctgccatgccccagcctccagcccaggctgcatactat
ggctgtggcccagtgacacccacccagcctgcccccaggtggacatcccagccacctaga
ccttcctgtgcctcaatggtccggccaccagttgtgcctcggcgccccccggcccacatc
agcagtgtcaggcaggcctccacccaggtgccacgcacggtgcctcatacccagagagta
gccaacattggtactcagaccacaggacccagtggggtaggatgctgtacaccaggccgg
ccgctcctgccgtgcaaatgttcctcagcagcacatagcacctatcgggtccaggagccg
gctgtgcacatcccaggacaggagcccctgaccgcgtccatgctggctgcggcgcccctg
catgagcaaaagcagatgattggggagcgtctctacccccttatccatgatgtccacacc
cagctggctggcaagatcacgggcatgctgctggagattgacaactcagagctgttgctc
atgctggagtctccagaatccctccatgccaaggtgacagacagggccatgggatcttgc
aagcagtggtggatgggagggttccacagaaaccctgtggatggaggaggatcctgtatc
caggatgatagacgaggcagtggccgtgctgcaggcacaccaggctatggagcagccgaa
ggcgtacatgcactgaaaccagaaaaggaaatcctcgcttccatggctgccaaaaggaca
gtgtttctggctctcagccctaaggccctgcaaactctaacttatttcccaattagtctg
tatctatacttgggctctagaaaatccaccaacatgacctcctaccagatccaaatccac
taccactacctagtggaataa

>gi568815578f:44801534_45006435|GENSCAN_predicted_peptide_5|464_aa
MAYLCNAICMTHMVTLDPVDQALPGATTATSVPGPQCDASCMMLFAVVPFNGIALAGHNL
PDSGASLLPCVIHGVLATQGAQSMLPPRVQGSLSSKPSTRRGRDAPGLQVSQAPPPRRGF
AVGRRYSPPALAPGRCAAPHGGGRKELPTRRPGHGMAPKFPDSVEELRAAGNESFRNGQY
AEASALYGRALRVLQAQGSSDPEEESVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSI
KPLLRRASAYEALEKYPMAYVDYKTVLQIDDNVTSAVEGINRMTRALMDSLGPEWRLKLP
SIPLVPVSAQKRWNSLPSENHKEMAKSKSKETTATKNRVPSAGDVEKARVLKEEGNELVK
KGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFY
RRAQAHKALKDYKSSFADISNLLQIEPRNGPAQKLRQEVKQNLH

>gi568815578f:44801534_45006435|GENSCAN_predicted_CDS_5|1395_bp
atggcatatttgtgtaatgccatttgcatgacccacatggtcaccctggaccccgtggat
caggccctgcctggtgccaccaccgccacttctgtgccaggcccccagtgtgatgcaagt
tgcatgatgctctttgctgtagtgccttttaatggcatagctttggcaggacataatctc
cctgatagcggggccagcctccttccctgcgtcatccacggcgttctagcaactcaggga
gcccagagcatgctgccgccccgcgtgcaagggagcctaagttccaaaccgagcacgcgc
agagggcgggacgctccgggcctccaggtctcgcaggccccgccccctcgccgcgggttc
gctgttgggcggagatattcgccgccggcgcttgcgcccggaaggtgtgccgcaccacac
gggggaggaaggaaggagctcccaactcgccggcctggccacgggatggcccccaaattc
ccagactctgtggaggagctccgcgccgccggcaatgagagtttccgcaacggccagtac
gccgaggcctccgcgctctacggccgcgcgctgcgggtgctgcaggcgcaaggttcttca
gacccagaagaagaaagtgttctctactccaaccgagcagcatgtcacttgaaggatgga
aactgcagagactgcatcaaagattgcacttcagcactggccttggttcccttcagcatt
aagcccctgctgcggcgagcatctgcttatgaggctctggagaagtaccctatggcctat
gttgactataagactgtgctgcagattgatgataatgtgacgtcagccgtagaaggcatc
aacagaatgaccagagctctcatggactcgcttgggcctgagtggcgcctgaagctgccc
tcaatccccttggtgcctgtttcagctcagaagaggtggaattccttgccttcggagaac
cacaaagagatggctaaaagcaaatccaaagaaaccacagctacaaagaacagagtgcct
tctgctggggatgtggagaaagccagagttctgaaggaagaaggcaatgagcttgtaaag
aagggaaaccataagaaagctattgagaagtacagtgaaagcctcttgtgtagtaacctg
gaatctgccacgtacagcaacagagcactctgctatttggtcctgaagcagtacacagaa
gcagtgaaggactgcacagaagccctcaagctggatggaaagaacgtgaaggcattctac
agacgggctcaagcccacaaagcactcaaggactataaatccagctttgcagacatcagc
aacctcctacagattgagcctaggaatggtcctgcacagaagttgcggcaggaagtgaag
cagaacctacactaa

>gi568815578f:44801534_45006435|GENSCAN_predicted_peptide_6|411_aa
METVQLRNPPRRMASFITDVQCLPNGLHILLSSSEPDIGRQLKKLDEDSLTKQPEEVFDV
LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSY
FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKA
GNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGI
TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA
TQLLQHPFVRSAKGVSILRDLINEAMDVKLKRQESQQREVDQDDEENSEEDEMDSGTMVR
AVGDEMGTVRVASTMTDGANTMIEHDDTLPSQLGTMVINAEDEEEEGTMKX

>gi568815578f:44801534_45006435|GENSCAN_predicted_CDS_6|1233_bp
atggagacggtacagctgaggaacccgccgcgccggatggcatcttttattactgatgtt
cagtgtcttcctaatggtcttcacatcctcctcagctcttcagaacctgacattgggagg
cagctgaaaaagttggatgaagatagtttaaccaaacaaccagaagaagtatttgatgtc
ttagagaaacttggagaagggtcctatggcagcgtatacaaagctattcataaagagacc
ggccagattgttgctattaagcaagttcctgtggaatcagacctccaggagataatcaaa
gaaatctctataatgcagcaatgtgacagccctcatgtagtcaaatattatggcagttat
tttaagaacacagacttatggatcgttatggagtactgtggggctggttctgtatctgat
atcattcgattacgaaataaaacgttaacagaagatgaaatagctacaatattacaatca
actcttaagggacttgaataccttcattttatgagaaaaatacaccgagatatcaaggca
ggaaatattttgctaaatacagaaggacatgcaaaacttgcagattttggggtagcaggt
caacttacagataccatggccaagcggaatacagtgataggaacaccattttggatggct
ccagaagtgattcaggaaattggatacaactgtgtagcagacatctggtccctgggaata
actgccatagaaatggctgaaggaaagcccccttatgctgatatccatccaatgagggca
atcttcatgattcctacaaatcctcctcccacattccgaaaaccagagctatggtcagat
aactttacagattttgtgaaacagtgtcttgtaaagagccctgagcagagggccacagcc
actcagctcctgcagcacccatttgtcaggagtgccaaaggagtgtcaatactgcgagac
ttaattaatgaagccatggatgtgaaactgaaacgccaggaatcccagcagcgggaagtg
gaccaggacgatgaagaaaactcagaagaggatgaaatggattctggcacgatggttcga
gcagtgggtgatgagatgggcactgtccgagtagccagcaccatgactgatggagccaat
actatgattgagcacgatgacacgttgccatcacaactgggcaccatggtgatcaatgca
gaggatgaggaagaggaaggaactatgaaaann