GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:20:58

Sequence gi568815578f:34160375_34369164 : 208790 bp : 46.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8735   8758   24  0  0   82  100    21 0.249   0.70
 1.02 Intr +  12060  12093   34  1  1   76   75    47 0.390  -0.52
 1.03 Term +  13867  14005  139  1  1  100   44    89 0.745   3.14
 1.04 PlyA +  14078  14083    6                               1.05

 2.08 PlyA -  15026  15021    6                               1.05
 2.07 Term -  15098  15042   57  2  0  104   40    36 0.019  -1.91
 2.06 Intr -  31114  31042   73  0  1   62   99    70 0.655   4.91
 2.05 Intr -  36404  36329   76  0  1   87   80    96 0.126   7.27
 2.04 Intr -  41279  41210   70  2  1   66   63    41 0.007  -1.85
 2.03 Intr -  53415  53229  187  2  1   59   82    82 0.050   4.39
 2.02 Intr -  55172  54082 1091  2  2   87   64   382 0.042  24.54
 2.01 Init -  55518  55411  108  0  0   83   89    53 0.961   5.12
 2.00 Prom -  64985  64946   40                              -3.66

 3.00 Prom +  72111  72150   40                              -5.86
 3.01 Init +  73403  73508  106  1  1   92   47    61 0.064   2.78
 3.02 Intr +  81033  81115   83  1  2   44   84    62 0.015   0.76
 3.03 Intr +  91782  91885  104  2  2  102   10    66 0.210  -0.83
 3.04 Intr +  99991 100160  170  1  2  130  106   119 0.824  17.49
 3.05 Intr + 102407 102519  113  0  2   91  116    71 0.909  10.30
 3.06 Term + 108617 108793  177  1  0   88   53   254 0.983  19.59
 3.07 PlyA + 112354 112359    6                               1.05

 4.17 PlyA - 112538 112533    6                               1.05
 4.16 Term - 120791 120660  132  2  0  101   54   209 0.972  16.89
 4.15 Intr - 125260 125066  195  1  0  110   98   300 0.997  32.81
 4.14 Intr - 130075 129958  118  0  1   60   94   299 0.997  28.17
 4.13 Intr - 130264 130177   88  2  1   61   94   113 0.995   8.23
 4.12 Intr - 130564 130357  208  1  1  123   53   431 0.999  41.75
 4.11 Intr - 131157 131045  113  1  2   83  105   247 0.999  26.00
 4.10 Intr - 132133 131984  150  2  0   52   99   286 0.902  26.23
 4.09 Intr - 133782 133707   76  0  1   96  114    76 0.979  10.09
 4.08 Intr - 135211 135021  191  2  2   95   78   388 0.999  37.80
 4.07 Intr - 142957 142869   89  0  2   16  109    79 0.570   2.41
 4.06 Intr - 143282 143144  139  0  1   43  117   102 0.388   8.12
 4.05 Intr - 151030 150907  124  1  1   49   36    87 0.287  -0.24
 4.04 Intr - 155822 155712  111  2  0   74   59    83 0.561   4.58
 4.03 Intr - 172390 172231  160  0  1   93   29   126 0.348   7.19
 4.02 Intr - 173520 173490   31  1  1  106   77    30 0.759   0.89
 4.01 Init - 175502 175430   73  2  1   71  109    18 0.709   2.08
 4.00 Prom - 187566 187527   40                              -2.86


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:34160375_34369164|GENSCAN_predicted_peptide_1|65_aa
XFFNKTGKDNFNVEATNIPSPPPEISADQNRSLKKLPEAGESSTRKEQKEQSSEYQPQQD
KIHYV

>gi568815578f:34160375_34369164|GENSCAN_predicted_CDS_1|198_bp
ngtttcttcaacaaaactggaaaagataacttcaatgtagaagccaccaatatccccagt
ccccctcctgaaattagtgctgatcagaacagaagtttgaagaaactacctgaggctgga
gaaagtagcaccagaaaagagcagaaggaacaatcctcagagtaccagccccaacaagat
aaaattcactatgtctga

>gi568815578f:34160375_34369164|GENSCAN_predicted_peptide_2|553_aa
MDKQALLGLNPNADSDFRLRALAYFEQLKISPDAWQNISLSGPSFFFDILSVVDLNPRGV
DLYLRILMAINSELVDRDVVHTSEEAHRNTLIKDTMREQCIPNLVESWYQISQNYQYTNS
EVMCQCLEVVGAYVSWIDLSLLANDRFINMLLGHMSIEVLREEACDCLFEVVNKGMDPVD
KMKLVESLCQVLQSAGFFSIDQEEDVDFFSALTRKKMLARFSKPVNGMGQSWIVSWSKLT
KNGNIKNAQEALQAIETKVALMLQLLIHEDDDISSNIGFCYDYLHILKQLTVLSDQQKAN
VEAIMLAVMKKLTYDEEYNFENEGQDKAMFVEYRKQLKLVLDRLAQVSRELLLASVRRVF
SSTLQNWQTTRFMEVEVAIRLLYMLAEALPVSISWCSLLSCPLQKGILRSGVCTFLHRMI
ICLEEEVFPFIPSASEHILKDCEAKDLQEFIPLINQITAKFKVYGSGSTRTRIYQRQLET
NSCLSNSCPVSKMQTSKGSREYFTPQNRLRRSCSRPPTDRWDQRAFNGDDSVLREPNTAV
KKRQSVVFQELRD

>gi568815578f:34160375_34369164|GENSCAN_predicted_CDS_2|1662_bp
atggataaacaggctctattagggctaaatccaaatgctgattcagactttagactaagg
gccctggcctattttgagcagttaaagatttccccagatgcctggcagaatatctcacta
agtggcccaagttttttttttgacattctctcagtagtggacctaaatccaaggggagta
gatctgtacctgcgaatcctcatggctatcaactcagagttggtggatcgtgatgtggtg
catacatcagaggaggctcacaggaatactctcataaaagataccatgagggaacagtgc
attccaaatctggtggaatcatggtaccaaatatcacaaaattatcagtatactaattct
gaagtgatgtgtcagtgccttgaagtagttggggcttatgtctcttggattgacttatcc
cttttagccaatgataggtttataaatatgctgctaggtcatatgtcaatagaagttcta
cgggaagaagcatgtgactgtttatttgaagttgtaaataaaggaatggaccctgttgat
aaaatgaaactagtagaatctttgtgtcaagtattacagtctgctggctttttcagcatt
gaccaggaagaagatgttgacttcttttcagcattgaccaggaagaagatgttggccaga
ttttctaagccggtaaacggaatgggacagtcatggatagttagttggagtaaattaact
aagaatgggaatattaagaatgctcaagaggcactacaagctattgaaacaaaagtggca
ctgatgttgcagctactaattcatgaggatgatgatatttcttctaatattggattttgt
tatgattatcttcatattttgaaacagcttacagtgctctcggatcagcaaaaagctaat
gtggaggcaatcatgttggccgttatgaaaaaattgacttatgatgaagaatataacttt
gaaaatgagggtcaagataaagccatgtttgtagaatatagaaaacaactgaagttagtg
ttggacaggcttgctcaagtttcacgagagttactactggcctctgttcgcagagttttt
agttctacactgcagaattggcagactacacggttcatggaagttgaagtagcaataaga
ttgctgtatatgttggcagaagctcttccagtatctatctcatggtgctcacttctcagt
tgtcccttacaaaagggtattctcagaagtggagtctgtactttccttcatcgaatgatt
atttgcctggaggaagaagtttttccgttcatcccatctgcttcagaacatatactcaaa
gattgtgaagcaaaagacctccaggagttcattcctcttatcaaccagattacggccaaa
ttcaaggtatatggctccggctccactcgcacccgaatctatcaaaggcagctggagacc
aattcttgtctctccaacagctgccctgtgagcaaaatgcagacctctaagggctctagg
gagtacttcacccctcagaaccggctacgcaggtcctgctccaggcctcccacagaccgc
tgggaccagagggccttcaatggggatgacagtgtgctcagggagcccaacactgcagtg
aaaaagagacagtctgtcgtcttccaggagcttagagattag

>gi568815578f:34160375_34369164|GENSCAN_predicted_peptide_3|250_aa
MMWPQLADQTRTAKPLPEKKSTGMRYQWNSLEEVKVIDEQAANLYSCKVKKEVPWPGLFA
GKHVGRETEKRNKTQRQSIEKEQWAQETGAQYTEDPHWPPGMDVTRLLLATLLVFLCFFT
ANSHLPPEEKLRDDRSLRSNSSVNLLDVPSVSIVAQRPQKHLTLLLLSLFEALNKKSKQI
GRKAAEKKRSSKKEASMKKVVRPRTPLSAPCVATRNSCKPPAPACCDPCASCQCRFFRSA
CSCRVLSLNC

>gi568815578f:34160375_34369164|GENSCAN_predicted_CDS_3|753_bp
atgatgtggccacaattggctgatcagactagaacagcaaaaccattacctgagaaaaag
tcaacaggaatgagataccagtggaatagcttggaagaggtcaaagttatagatgagcaa
gcagcaaatctctacagctgcaaggtgaaaaaggaagttccttggcctgggctctttgcg
ggaaagcatgtgggacgagagactgagaaaagaaataagacacagagacaaagtatagag
aaagaacagtgggcccaggagaccggtgctcagtatacagaggacccgcactggcctcct
gggatggatgtcacccgcttactcctggccaccctgctggtcttcctctgcttcttcact
gccaacagccacctgccacctgaggagaagctccgagatgacaggagcctgagaagcaac
tcctctgtgaacctactggatgtcccttctgtctctattgtggctcaacgtccccagaaa
catctgactttgctccttttgtctctctttgaagcgctgaacaagaaatccaaacagatc
ggcagaaaagcagcagaaaagaaaagatcttctaagaaggaggcttcgatgaagaaagtg
gtgcggccccggacccccctatctgcgccctgcgtggccacccgcaacagctgcaagccg
ccggcacccgcctgctgcgacccgtgcgcctcctgccagtgccgcttcttccgcagcgcc
tgctcctgccgcgtgctcagcctcaactgctga

>gi568815578f:34160375_34369164|GENSCAN_predicted_peptide_4|665_aa
MYPQVSSILEAFMLEILSFSFQWAAFPPHKTLKEWREHVSECGIWPATPSTDTGASSMRA
RGHTRCIASRGTWRHPGKDACDPEAPERTPRAAIMKYHAFGGLQQQKFILSQFWKPEVQN
QGIGRKLHWGLDLEKGHQQLTSRAAFSGVGGDPQGSTVSSFLYIQPDEEIEAQGSELAEF
QFRWVLTLNQLAEPARGRPGWLSGLSRRSLPDRSCSQTEAQPPSPVSITSAASMSDKLPY
KVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETL
VTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNM
ILDDGGDLTNLIHTKYPQLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKS
KFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPI
NALQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEID
VKWLNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVM
AQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKP
DHYRY

>gi568815578f:34160375_34369164|GENSCAN_predicted_CDS_4|1998_bp
atgtacccacaggtctcctctatcctggaggcattcatgcttgagatcctgagcttctca
ttccaatgggcagcttttcctccgcataagaccctgaaggaatggagggagcacgtgagt
gagtgcgggatctggccagccactccaagcactgacacaggagcaagctccatgcgggcc
cgtggacacaccaggtgtattgcctcaagggggacatggcggcatccaggcaaggatgcc
tgcgaccctgaagccccagagaggactcccagagctgccattatgaagtaccacgcattt
ggtggcttacaacaacagaaatttattctctcacagttctggaagccagaagtccaaaat
caaggcattggcaggaagctccactggggcctggacctggagaagggacatcaacagtta
acgtccagggcagctttcagcggcgtgggcggggatccccagggaagcactgttagcagt
ttcttgtacatccagcctgatgaggaaattgaggcacagggaagtgaactggcggaattt
cagttccgctgggttttgacactgaatcaactggctgaaccagcgagaggacggcccggc
tggctctcaggcctctcccggcgctcccttccggaccgttcctgttcccagactgaggcc
cagcccccttcgcccgtttccatcacgagtgccgccagcatgtctgacaaactgccctac
aaagtcgccgacatcggcctggctgcctggggacgcaaggccctggacattgctgagaac
gagatgccgggcctgatgcgtatgcgggagcggtactcggcctccaagccactgaagggc
gcccgcatcgctggctgcctgcacatgaccgtggagacggccgtcctcattgagaccctc
gtcaccctgggtgctgaggtgcagtggtccagctgcaacatcttctccacccaggaccat
gcggcggctgccattgccaaggctggcattccggtgtatgcctggaagggcgaaacggac
gaggagtacctgtggtgcattgagcagaccctgtacttcaaggacgggcccctcaacatg
attctggacgacgggggcgacctcaccaacctcatccacaccaagtacccgcagcttctg
ccaggcatccgaggcatctctgaggagaccacgactggggtccacaacctctacaagatg
atggccaatgggatcctcaaggtgcctgccatcaatgtcaatgactccgtcaccaagagc
aagtttgacaacctctatggctgccgggagtccctcatagatggcatcaagcgggccaca
gatgtgatgattgccggcaaggtagcggtggtagcaggctatggtgatgtgggcaagggc
tgtgcccaggccctgcggggtttcggagcccgcgtcatcatcaccgagattgaccccatc
aacgcactgcaggctgccatggagggctatgaggtgaccaccatggatgaggcctgtcag
gagggcaacatctttgtcaccaccacaggctgtattgacatcatccttggccggcacttt
gagcagatgaaggatgatgccattgtgtgtaacattggacactttgacgtggagatcgat
gtcaagtggctcaacgagaacgccgtggagaaggtgaacatcaagccgcaggtggaccgg
tatcggttgaagaatgggcgccgcatcatcctgctggccgagggtcggctggtcaacctg
ggttgtgccatgggccaccccagcttcgtgatgagtaactccttcaccaaccaggtgatg
gcgcagatcgagctgtggacccatccagacaagtaccccgttggggttcatttcctgccc
aagaagctggatgaggcagtggctgaagcccacctgggcaagctgaatgtgaagttgacc
aagctaactgagaagcaagcccagtacctgggcatgtcctgtgatggccccttcaagccg
gatcactaccgctactga