GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:30:01

Sequence gi568815577r:34349248_34549634 : 200387 bp : 44.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  19431  19470   40                              -2.66
 1.01 Sngl +  21232  21603  372  0  0   71   44   431 0.952  33.13
 1.02 PlyA +  21751  21756    6                               1.05

 2.09 PlyA -  22150  22145    6                               1.05
 2.08 Term -  26308  26109  200  2  2   78   52   164 0.923   9.36
 2.07 Intr -  26621  26493  129  0  0   74   75   119 0.940   9.87
 2.06 Intr -  33527  33443   85  2  1   71   65    56 0.027   0.99
 2.05 Intr -  39418  39304  115  0  1  123   26   -20 0.064  -4.25
 2.04 Intr -  42465  42339  127  1  1   59  113    96 0.829   8.94
 2.03 Intr -  42879  42781   99  1  0  128   28    50 0.439   3.08
 2.02 Intr -  44709  44597  113  2  2   65   59    79 0.824   2.72
 2.01 Init -  51825  51473  353  0  2  110   34   130 0.760   6.44
 2.00 Prom -  54286  54247   40                              -4.16

 3.04 PlyA -  54516  54511    6                               1.05
 3.03 Term -  58484  58389   96  2  0  105   37    42 0.385  -1.23
 3.02 Intr -  62061  61873  189  0  0    3   89   135 0.412   4.88
 3.01 Init -  62322  62161  162  0  0   74   37   103 0.273   3.53
 3.00 Prom -  63336  63297   40                              -6.56

 4.00 Prom +  63474  63513   40                              -4.26
 4.01 Init +  64803  64865   63  2  0   91   80    26 0.881   3.25
 4.02 Intr +  67763  67796   34  1  1   93   50   106 0.121   5.10
 4.03 Term +  68341  68480  140  2  2  -16   39   155 0.129  -1.67
 4.04 PlyA +  68767  68772    6                              -0.45

 5.04 PlyA -  68779  68774    6                              -0.45
 5.03 Term -  70383  69971  413  1  2   73   54   365 0.952  27.00
 5.02 Intr -  77082  76902  181  0  1   88   36    73 0.218   1.54
 5.01 Init -  86720  86580  141  2  0   71    2   136 0.010   3.43
 5.00 Prom -  93605  93566   40                              -6.16

 6.02 PlyA -  94656  94651    6                               1.05
 6.01 Sngl - 100387  99998  390  1  0   70   46   588 0.816  48.82
 6.00 Prom - 105471 105432   40                              -3.96

 7.00 Prom + 108006 108045   40                              -1.76
 7.01 Init + 108715 108722    8  0  2   58   87     0 0.073  -2.58
 7.02 Intr + 115007 115114  108  2  0  117   86    52 0.308   7.30
 7.03 Intr + 119710 119844  135  1  0  -52  105   141 0.333   1.48
 7.04 Intr + 120646 120761  116  1  2   50   66    63 0.666   0.39
 7.05 Term + 123557 123795  239  0  2   29   48   184 0.682   4.83
 7.06 PlyA + 123929 123934    6                               1.05

 8.07 PlyA - 124431 124426    6                               1.05
 8.06 Term - 129463 129428   36  1  0  130   48    11 0.062  -1.36
 8.05 Intr - 138849 138727  123  0  0   47   84    57 0.156   1.98
 8.04 Intr - 145818 145733   86  1  2   53   85    51 0.104   0.84
 8.03 Intr - 156511 156449   63  2  0   71   83    53 0.190   1.79
 8.02 Intr - 157345 157282   64  1  1   84   63    24 0.308  -2.21
 8.01 Init - 160041 159952   90  0  0   72  105    59 0.677   6.49
 8.00 Prom - 166611 166572   40                              -8.26

 9.05 PlyA - 167217 167212    6                               1.05
 9.04 Term - 169009 168837  173  2  2  115   43   151 0.998  11.29
 9.03 Intr - 172411 172252  160  1  1  131   99    21 0.993   7.06
 9.02 Intr - 174463 174290  174  1  0  118  109   123 0.999  17.54
 9.01 Init - 177502 177416   87  1  0   74   86    47 0.932   3.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  29439  29385   55  0  1   35  119    62 0.825   5.45


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_1|123_aa
MSTLSNFTQTLEDVFRRIFITYMDNWRQNTTAEQEALQAKVDAENFYYVILYLMVMIGMF
SFIIVAILVSTVKSKRREHSNDPYHQYIVEDWQEKYKSQILNLEESKATIHENIGAAGFK
MSP

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_1|372_bp
atgtctactttatccaatttcacacagacgctggaagacgtcttccgaaggatttttatt
acttatatggacaattggcgccagaacacaacagctgagcaagaggccctccaagccaaa
gttgatgctgagaacttctactatgtcatcctgtacctcatggtgatgattggaatgttc
tctttcatcatcgtggccatcctggtgagcactgtgaaatccaagagacgggaacactcc
aatgacccctaccaccagtacattgtagaggactggcaggaaaagtacaagagccaaatc
ttgaatctagaagaatcgaaggccaccatccatgagaacattggtgcggctgggttcaaa
atgtccccctga

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_2|406_aa
MPRFASPLLRNVIIRSQFDGIKRKQCLQYLKTLRTLQYDGFKTVYFGETNIPESLVTGED
ISDGYFIQTPTWCIVHAAGSQGWVPWKYRVFLRDELCIKQEDSLFSEFCDVVRKAYGNHS
LIKYWSTFCVPGWVRQGQEYQGKQAWTLKVQVWCGDSPPSILWLHSDTDEICMGELPHGV
MVRVFPAVDCVKRLNLFFTPEVITMNITSSRVASHVGRCGCRSVWRMKSTRWSPLKLTFT
WQNLEGNTKGMSRKCLIRVYPMFTAQHKDAVETHGKRQKCGLRRTQHKGSRGQEHSQDSP
GTNTVGLNQSWAPPGPRASRNTLLNGLTAPDGQVQQGRPAAEAPAPGRAQTTTSTVLPGK
TTGPEMHRYVLRRSGPVPPTRVHYSVRRRSGPGQKTWGALLTAQAQ

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_2|1221_bp
atgcctcgctttgcaagccctcttttaagaaatgtcattatcagaagtcaatttgatggc
atcaagaggaagcaatgcctccaatatctgaaaaccctgagaacactgcaatatgatgga
tttaagaccgtatattttggggaaaccaatatcccagaaagtctcgtaactggggaagat
attagtgatggatatttcatacaaaccccaacttggtgtattgtgcatgctgcgggtagt
caaggatgggtgccttggaaatatcgggtgttcctaagagacgagctgtgtatcaaacaa
gaagacagcctcttctctgagttctgtgatgtggtgaggaaggcctatggaaatcattca
ctcatcaaatactggagcaccttctgtgtgcctggctgggtgcgtcagggccaggagtac
caaggaaaacaagcctggaccctcaaggtccaggtctggtgtggagactctccaccgtcc
atcctctggcttcactctgacacagatgagatctgcatgggggagctccctcatggtgtg
atggtgcgtgtgtttccggcagtggactgtgtgaaacggctgaacctcttcttcacgcct
gaggtcatcaccatgaacataacatcatcacgtgtggcatcccatgtgggacgctgtggc
tgccgcagtgtctggcgcatgaagagcacacgctggagtccactcaagctgacatttaca
tggcagaatctagaagggaataccaaagggatgagtaggaaatgtttgataagagtatac
ccgatgtttactgctcagcataaagacgcagtggagacgcacggcaagaggcagaagtgt
ggactgagaaggacgcagcacaagggcagcagaggtcaagaacattcacaggactctccg
gggaccaacaccgtaggcttgaaccaatcctgggccccgcccgggccacgtgccagccgg
aacacgctgctcaacgggttgacggcgcccgacggccaggtccagcaggggcgccccgca
gcggaggctccagcgcctggccgcgcacaaaccacgacttctaccgtcctgccggggaaa
actacaggtcccgaaatgcaccgctacgtgctcaggcgcagtgggccggtgccgccgacg
agagtgcactactccgtgcgcaggcgcagtgggcccgggcagaagacctggggcgcgctg
ctcactgcgcaggcgcagtga

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_3|148_aa
MGSVPLQEETPDPPLSLHLVRTQQEVFYPRTRKQVLTGYRICQHLDLRLPASRTAARLIP
SDSCSSGKRFQYRPSSTPTQKTVTEVFKERTEREQKGTEGEMKTERGGHVEMESSRTVRF
QEKPEMGVCLNKPGAEEGRREFGDYPDS

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_3|447_bp
atgggatcagtgcccttacaggaagagacaccagacccccctctctctctgcaccttgtg
aggacacagcaagaagtgttctacccgcgaaccaggaagcaggtcctcaccgggtaccga
atctgccaacaccttgatctcagacttccagcttccagaactgcggcaagactgattcct
tcagactcctgcagcagcggaaagagattccagtaccgaccaagctcaaccccaactcag
aaaacggtgactgaggtcttcaaagagagaacagaaagggaacaaaaagggactgaagga
gaaatgaaaacagaacgtgggggccacgtggaaatggaaagttccagaacggtgaggttc
caggagaagccagagatgggggtttgccttaacaaaccaggagctgaggaaggtcgaaga
gaattcggtgattatcccgactcatga

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_4|78_aa
MGAELSFGRILVRRFSNWGRQDDDNDDDDNDDASSPPPLMPTSTTTTYATTVSIITTTNN
ITNSNTAININHHHHQNH

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_4|237_bp
atgggagctgagctgtcttttgggagaatcctagtgagaaggttctccaactggggccgc
caagatgatgacaatgatgatgacgacaatgatgatgcatcatcaccaccaccattaatg
ccaacatcaaccaccaccacctacgccaccaccgttagcatcataaccaccaccaataac
atcaccaacagcaacactgccatcaacataaaccatcaccaccaccaaaaccattag

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_5|244_aa
MGKDFTSKTPKAMAAKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWDQGHKILLILHLL
HHLHLTDEETEAHKDEGAGPGSCSKDVAGARALTPSPYHCHEPLIITGAKWTPHEASNQT
QASTLLGLLLGDHTEGRNDTNSTRALKVPDGTSAAWYILTIIGIYAVIFVFRLASNILRK
NDKSLEDVYYSNLTSELKMTGLQGKVAKCSTLSISNRAVLQPCQAHLGAKGGSSGPQTAT
PETP

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_5|735_bp
atgggcaaggacttcacgtctaaaacaccaaaagcaatggcagcaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacagaatgggaccaaggacataagatcctgctcatccttcacctcctt
caccaccttcacctcacagatgaggaaactgaggctcacaaagatgagggggctggccca
gggtcatgcagcaaggatgtggctggggccagagccctgactcccagcccttatcactgc
cacgagccccttattatcacgggggccaagtggactccccatgaagcctccaaccagacc
caggccagcaccctcctggggctcctgctgggtgaccacacagaggggaggaatgacacc
aactccaccagggctctgaaggtgccagacggaaccagcgctgcctggtatatactcacc
atcatcggcatctacgcggtgattttcgtcttccggctggccagcaacatcctcagaaag
aatgacaagtccttagaagatgtttattactcaaatctgacctctgaactcaaaatgaca
gggctgcagggcaaggtcgccaagtgctccaccctgtctatcagcaacagagctgtgctg
cagccctgccaggcccacctgggggcaaagggcggaagcagcgggccccaaaccgcaacc
ccagagaccccctga

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_6|129_aa
MILSNTTAVTPFLTKLWQETVQQGGNMSGLARRSPRSSDGKLEALYVLMVLGFFGFFTLG
IMLSYIRSKKLEHSNDPFNVYIESDAWQEKDKAYVQARVLESYRSCYVVENHLAIEQPNT
HLPETKPSP

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_6|390_bp
atgatcctgtctaacaccacagcggtgacgccctttctgaccaagctgtggcaggagaca
gttcagcagggtggcaacatgtcgggcctggcccgcaggtccccccgcagcagtgacggc
aagctggaggccctctacgtcctcatggtactgggattcttcggcttcttcaccctgggc
atcatgctgagctacatccgctccaagaagctggagcactcgaacgacccattcaacgtc
tacatcgagtccgatgcctggcaagagaaggacaaggcctatgtccaggcccgggtcctg
gagagctacaggtcgtgctatgtcgttgaaaaccatctggccatagaacaacccaacaca
caccttcctgagacgaagccttccccatga

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_7|201_aa
MGKHFFTGLASVSSFTQHRLMPATERDPGLFQISDPQQRQLGSGADPEQTTAALRKSDLT
DKRKTNKQTESTTDNINQENPIQRDTDGAGSRYPQQTNAGTENQTLHDLIYKWELNDKNT
WPQTDRYSMLKISANIVEFSSTINQLDLIHLKRHPTTAEYTFFSSSYGTLTKIDHILRHK
IHLANLEESKSSYVCPQTTME

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_7|606_bp
atgggaaaacacttcttcacgggtctagcctctgtttccagctttacacagcacaggctg
atgcctgccactgaacgggatccaggactttttcaaatctcagatccccagcaaaggcaa
ctagggtctggagcagaccctgagcaaaccacagcagccctgcggaagagtgacctgact
gataaaagaaaaacaaacaaacaaacagaaagcaccaccgacaacatcaaccaggaaaac
cccattcaaagggacaccgatggagctggaagccgttatcctcagcaaactaatgcagga
acagaaaaccaaacactgcatgatctcatttataagtgggagctgaatgacaagaacaca
tggccacaaacagacagatacagcatgctaaaaatcagtgcgaacatagttgaattcagc
agcaccatcaatcaactggatctgattcatctaaaacgtcatccaacaacagcagaatac
acattcttctcaagctcatatggaacactcaccaagatagaccacattctgcgtcataaa
atacacttggcaaatttagaagaatcaaaatcatcctatgtctgccctcagaccacaatg
gaatga

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_8|153_aa
MAPGQQPARKRTPPSSNHKEMDSTNTTCALLQISPGSAKPGTVEQHQVCPLARGSSVEIC
VGHSGHIHMATGDAGKAFDKIQHLFMIKTLSKIGIEGTHLKSGCQHLELLIPLQQLMHLT
VHSNWTLQTCHSTPGSPVVAGRNPTLDLVVMSL

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_8|462_bp
atggcccccggccagcagccagcaaggaagaggacacctccgtcctccaaccacaaggaa
atggattctaccaacactacatgtgctctgctgcagatctcccctggcagtgctaagcct
ggcactgttgagcaacaccaggtctgtcccttagcgaggggatcaagtgtagaaatctgc
gtgggccactcaggacacatccacatggcaacaggagatgcaggaaaagcatttgacaaa
atccagcatctttttatgattaaaaccctcagcaaaattggcatagaagggacacacctt
aagtctggatgccagcacctggagctgctcattccattgcagcagctgatgcacctgact
gtgcacagtaactggaccctgcaaacttgccactccacacctggctcacctgtggtggct
ggtaggaatcccacattagatttagttgtcatgtctctttag

>gi568815577r:34349248_34549634|GENSCAN_predicted_peptide_9|197_aa
MHFRNFNYSFSSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSN
PFSAADARLQLHKTEFLGKEMKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQV
EDATPVINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPK
PKIIQTRRPEYTPIHLS

>gi568815577r:34349248_34549634|GENSCAN_predicted_CDS_9|594_bp
atgcattttagaaactttaactacagttttagctccctgattgcctgtgtggcaaacagt
gatatcttcagcgaaagtgaaaccagggccaaatttgagtccctctttaggacgtatgac
aaggacatcacctttcagtattttaagagcttcaaacgagtcagaataaacttcagcaac
cccttctccgcagcagatgccaggctccagctgcataagactgagtttctgggaaaggaa
atgaagttatattttgctcagaccttacacataggaagctcacacctggctccgccaaat
ccagacaagcagtttctgatctcccctcccgcctctccgccagtgggatggaaacaagtg
gaagatgcgaccccagtcataaactatgatctcttatatgccatctccaagctggggcca
ggggaaaagtatgaattgcacgcagcgactgacaccactcccagcgtggtggtccatgta
tgtgagagtgatcaagagaaggaggaagaagaggaaatggaaagaatgaggagacctaag
ccaaaaattatccagaccaggaggccggagtacacgccgatccacctcagctga