GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:26:40

Sequence gi568815575r:87603346_87804193 : 200848 bp : 36.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10532  10699  168  2  0  101   97   121 0.725  12.44
 1.02 Intr +  11089  11225  137  1  2   88  111   137 0.930  15.29
 1.03 Intr +  14587  14783  197  2  2   55   53   210 0.975  12.41
 1.04 Intr +  18866  19078  213  1  0   58   80    75 0.591   1.69
 1.05 Intr +  22265  22451  187  1  1   59   93   124 0.946   8.34
 1.06 Intr +  28865  29089  225  0  0   47   82   149 0.165   7.23
 1.07 Intr +  30404  30566  163  0  1   79   89   126 0.969   9.91
 1.08 Intr +  32218  32430  213  1  0   73  127   139 0.904  13.21
 1.09 Term +  40532  40919  388  2  1   10   47   236 0.203   5.13
 1.10 PlyA +  40969  40974    6                               1.05

 2.00 Prom +  51494  51533   40                              -4.15
 2.01 Init +  53963  54012   50  1  2   98   68    72 0.779   4.78
 2.02 Intr +  61419  61590  172  0  1   73   51   201 0.976  13.92
 2.03 Term +  65984  66049   66  1  0  105   32    60 0.581  -0.94
 2.04 PlyA +  66686  66691    6                               1.05

 3.00 Prom +  74404  74443   40                              -0.95
 3.01 Init +  78875  78932   58  1  1   36  119    18 0.785   1.22
 3.02 Intr +  79062  79267  206  1  2   83   19   152 0.715   5.80
 3.03 Intr +  81052  81094   43  0  1   15  121    66 0.179  -0.51
 3.04 Intr +  82907  83179  273  0  0   69   54   113 0.250   2.59
 3.05 Term +  90462  90631  170  1  2   73   42    79 0.123  -1.14
 3.06 PlyA +  91870  91875    6                               1.05

 4.02 PlyA -  92672  92667    6                               1.05
 4.01 Sngl - 100885  99998  888  1  0   60   43   976 0.669  86.12
 4.00 Prom - 101752 101713   40                              -6.65

 5.00 Prom + 104698 104737   40                              -5.35
 5.01 Sngl + 105075 105515  441  2  0   70   55   140 0.652   4.90
 5.02 PlyA + 105531 105536    6                               1.05

 6.00 Prom + 106716 106755   40                              -1.65
 6.01 Init + 119438 119474   37  1  1   92   77    29 0.490   2.45
 6.02 Intr + 120502 120591   90  2  0   99  101    32 0.407   4.65
 6.03 Term + 127804 127913  110  2  2  101   38    41 0.083  -1.91
 6.04 PlyA + 128308 128313    6                               1.05

 7.05 PlyA - 128474 128469    6                               1.05
 7.04 Term - 147859 147784   76  0  1  128   53    50 0.689   1.83
 7.03 Intr - 150165 149926  240  2  0   49   99    84 0.475   1.34
 7.02 Intr - 151428 151339   90  2  0   98   67   126 0.995   9.69
 7.01 Init - 153821 153772   50  2  2   62   76    57 0.988   2.37
 7.00 Prom - 155293 155254   40                              -1.95

 8.02 PlyA - 155473 155468    6                               1.05
 8.01 Sngl - 161089 160763  327  1  0   57   48   171 0.607   5.78
 8.00 Prom - 161798 161759   40                              -5.05

 9.00 Prom + 166890 166929   40                              -4.85
 9.01 Init + 167359 167368   10  0  1   90   68     1 0.140  -0.85
 9.02 Intr + 175602 176085  484  1  1   58   70   265 0.617  12.85
 9.03 Intr + 178499 178643  145  2  1   44   41    63 0.539  -3.44
 9.04 Term + 178886 179590  705  1  0   31   43   254 0.591   7.72
 9.05 PlyA + 179976 179981    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  28924  29089  166  0  1  101   82   124 0.833  12.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_1|630_aa
XLDTQHSEDMNATRSEEQFHVINHAEQTLRKMENYLKEKQLCDVLLIAGHLRIPAHRLVL
SAVSDYFAAMFTNDVLEAKQEEVRMEGVDPNALNSLVQYAYTGVLQLKEDTIESLLAAAC
LLQLTQVIDVCSNFLIKQLHPSNCLGIRSFGDAQGCTELLNVAHKYTMEHFIEVIKNQEF
LLLPANEISKLLCSDDINVPDEETIFHALMQWVGHDVQNRQGELGMLLSYIRLPLLPPQL
LADLETSSMFTGDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDAM
KGTTTIEKYDLRTNSWLHIGTMNGRRLQFGVAVIDNKLYVVGGRDGLKTLNTVECFNPVG
KIWTVMPPMSTHRHGLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPR
STVGVVALNNKLYAIGGRDGSSCLKSMEYFDPHTNKWSLCAPMSKRRGGVGVATYNGFLY
VVGGHDAPASNHCSRLSDCVERISIQGTYLNVIKTIYDKPTANTILNVEKLKTFPLRTGT
RQGCPLSALLFNMVLEVIARAIRQEKGIKGIQISKKEVKLSLFADDMIVHIENPKDSSRK
LLELIKEFSKVSGYKINVHKPVALLYTNSN

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_1|1893_bp
nnattagatacacaacactctgaagacatgaatgccaccagatctgaagagcagttccat
gttataaaccacgcagagcaaactcttcgtaaaatggagaactacttgaaagagaaacaa
ctatgtgatgtgctactgattgcaggacacctccgcatcccagcccataggttggttctc
agcgcagtgtctgattattttgctgcaatgtttactaatgatgtgcttgaagccaaacaa
gaagaggtcaggatggaaggagtagatccaaatgcactaaattccttggtgcagtatgct
tacacaggagtcctgcaattgaaagaagataccattgaaagtttgctggctgcagcttgt
cttctgcagctgactcaggtcattgatgtttgctccaattttctcataaagcagctccat
ccttcaaactgcttagggattcgatcatttggagatgcccaaggctgtacagaacttctg
aacgtggcacacaaatacactatggaacacttcattgaggtaataaaaaaccaagaattc
ctcctgcttccagctaatgaaatttcaaaacttctgtgcagtgatgacattaatgtgcct
gatgaagagaccatttttcatgctctaatgcagtgggtggggcatgatgtgcagaatagg
caaggagaactggggatgctgctttcttacatcagactgccattactcccaccacagtta
ctggcagatcttgaaaccagttccatgtttactggtgatcttgagtgtcagaagctcctg
atggaagctatgaagtatcatcttttgcctgagagaagatccatgatgcaaagccctcgg
acaaagcctagaaaatcaactgtgggggcactttatgctgtaggaggcatggatgctatg
aaaggtactactactattgaaaaatatgacctcaggaccaacagttggctacatattggc
accatgaatggccgtaggcttcaatttggagtcgcagttattgataataagctctatgtc
gtgggaggaagagacggtttaaaaactttgaatacagtggaatgttttaatccagttggc
aaaatctggactgtgatgcctcccatgtcaacacatcggcacggcttaggtgtagccact
cttgaaggaccaatgtatgctgtaggtggtcatgatggatggagctatctaaatactgta
gaaagatgggaccctgagggacgacagtggaattacgtagccagtatgtcaactcctaga
agcacagttggtgttgttgcattaaacaacaaattatatgctattggtggacgtgatgga
agttcctgcctcaaatcaatggaatactttgacccacacactaacaagtggagtttgtgt
gctccaatgtccaaaagacgtggaggtgtgggagttgccacatacaatggattcttatat
gttgtaggggggcatgatgcccctgcttccaaccattgctccaggctttctgactgtgtg
gaacgaatcagcatacaagggacataccttaatgtaataaaaaccatctatgacaaaccc
acagccaacacaatactgaatgtggaaaagttgaaaacattccctctgagaactggaaca
agacaaggctgcccactgtctgcactcctcttcaacatggtactggaagtcatagccaga
gcaatcagacaagagaaaggaataaagggcatccaaatcagtaaaaaggaagtcaaactc
tcactgtttgctgatgatatgatcgttcacattgaaaaccctaaagactcctcaagaaag
ctcctagaactgataaaagaattcagcaaagtttctggatataagattaatgtacacaaa
ccagtagctcttctatacaccaacagcaactaa

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_2|95_aa
MKRVKLGRAGPAGATLRYDPKGDSWSTVAPLSVPRDAVAVCPLGDKLYVVGGYDGHTYLN
TVESYDAQRNEWKESMQELLQNFYTTQKLKETLGH

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_2|288_bp
atgaagagggtgaagttgggcagagctggaccagctggggccaccctcaggtatgatcca
aaaggtgattcatggtcaactgtggcacctctgagtgttcctcgagatgctgttgctgtg
tgccctcttggagacaaactctacgtggttggaggatatgacggacatacttatttgaac
acagttgagtcatatgatgcacagagaaatgaatggaaagagagcatgcaagaacttcta
caaaacttctataccacacagaagctgaaagagactctggggcactaa

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_3|249_aa
MTSGPQTDQPKKHLINFKSVTKETRFIHGPGTLAPVTDWEGSLPLVFNHCRDASLIIHPC
FKGVRPHRDACLGPSPLAASPAFLGKGQTITDSEFPVTLTVEDIIPQFSLPTSIQSDNRR
AFISQISQAVFQALSIQGNLYIPYGPPSSRKVEWTKGLLKTHLTKLSHQLKRTGQYFYHF
PFSEFRPVLGMLQGKSLMYDGLTYDFSTVESDTHSVLSLIYEGFLLDRTIINQGASVYHY
HKIINTHLQ

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_3|750_bp
atgacctcaggtcctcagaccgaccagcccaagaaacatctcatcaatttcaaatccgtg
acaaaggagacacgttttatccatggacccggaactctggcgccggtcacggactgggaa
ggcagccttcccttggtgtttaatcattgcagggacgcctctctgattatacacccatgt
ttcaagggtgtcagaccacacagggatgcctgccttggtccttcacccttagcggcaagt
cccgcttttctggggaaggggcaaaccatcacagactccgagtttccggtaactctcaca
gtggaagacataattcctcagtttagccttcccacctcaatacagtctgataacagacga
gcctttattagtcaaatcagccaagcagtttttcaggctcttagtattcagggaaacctt
tatatcccttacggtcctccatcttcaagaaaagtagaatggactaaaggtctcttaaaa
acacacctcaccaagctcagccaccaacttaaaaggactggacaatacttttaccacttt
cccttctcagaattcaggcctgtcctcggaatgctacaggggaaatcgctgatgtatgat
ggcttgacttatgatttttcaactgtggaaagtgatacacattcagtactctccttaatt
tatgaggggtttcttctggatagaaccatcataaatcaaggagcatctgtatatcattat
cataagataataaatacacatttgcagtag

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_4|295_aa
MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
TARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
LLVVSDPRADHQPLTEASYVNLPTIALCNTDSPLHYVDIAIPCNNKGTHSVGLMWWMLAR
EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAMTREELQGEWTAPAPEFTA
TQPEVADWSEGVQVPSVPIQQFPTEDWSTQRATEDWSAAPTAQATEWVGATTDWS

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_4|888_bp
atgtccggagcccttgatgtcctgcaaatgaaggaggaggatgtccttaagttccttgca
gcaggaacccacttaggtggcaccaatcttgacttccagatggaacagtacatctataaa
aggaaaagtgatggcatctatatcataaatctgaagaggacctgggagaagcttctgctg
acagctcgtgctattgttgccattgaaaaccctgctgatgtcagtgttatatcctccagg
aatactggccagagggctgtgctgaagtttgctgctgccactggagccactccaattgct
ggccgcttcactcctggaaccttcactaaccagatccaggcagccttccgggagccacgg
cttcttgtggttagtgaccccagggctgaccaccagcctctcacggaggcatcttatgtt
aacctacctaccattgctctgtgtaacacagattctcctctgcactatgtggacattgcc
atcccatgcaacaacaagggaactcactcagtgggtttgatgtggtggatgctggctcgg
gaagttctgcgcatgcgtggcaccatttcccgtgaacacccatgggaggtcatgcctgat
ctctacttctacagagatcctgaagagattgaaaaagaagagcaggctgctgctgaaaag
gcaatgaccagggaggaacttcagggtgaatggactgctccagctcctgagttcactgct
actcagcctgaggttgcagactggtctgaaggtgtacaggtgccctctgtgcctattcag
cagttccctactgaagactggagcactcagcgtgccacggaagactggtctgcagctccc
actgctcaggccactgaatgggtaggagcaaccactgactggtcttaa

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_5|146_aa
MGLQTLGKYTHSKWEELAKVKGIQAPGNSKLQQHSQILNSNMISIDFMSHIEVTLMQDVS
SHSLGQLHPSGFAGYSPHPGCFHGLVLSVCGFSRHTVQTVGGSTILGSGGSWPSSDSSTR
MCPSGDFVWGLQPHISLLHHPSGDSP

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_5|441_bp
atggggttacagacactgggtaaatacactcattccaaatgggaggaattggccaaagtg
aaggggatacaggccccaggcaattccaaactccagcagcacagtcaaatcttaaactct
aacatgatctccattgacttcatgtctcacattgaggtcacactgatgcaagacgtgagc
tcccacagccttgggcagctccacccctctggctttgcagggtacagcccccatcctggc
tgctttcatgggcttgtgttgagtgtctgtggcttttccaggcacacagtgcaaactgtc
ggtggatctaccattctggggtctggaggaagttggccctcatctgacagctctaccagg
atgtgccccagtggagacttcgtgtgggggcttcaaccccacatttcccttctgcaccac
cctagtggagattctccctga

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_6|78_aa
MGSSVARTLVVLGIAAGLFVVQLKIGFFDPGPQKFRLADILNEYKHTQLLTDNYRVKKVQ
KSLLGERMGYFLKNTPKF

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_6|237_bp
atggggtcttctgtagctaggactctggtggtccttggtattgctgcaggactttttgta
gttcagctaaaaatagggttctttgacccagggccacaaaaattcaggcttgcagacatt
ttgaatgaatacaagcacacgcaactattaactgacaactacagagtaaagaaagtgcag
aaatcattgttaggtgaacgtatgggttattttcttaaaaacactccaaaattttaa

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_7|151_aa
MRTIDTRASLNRERSRIPLESEAPISHYICEPEEDLKYLFKRQPKDRTRNNGLGTGARIL
ATSLSYYQRLSENLSDSLEDITQSTVIIQNKMESLAVVTLQNRRGLDLLLKKVAYVFFLE
VCCFYVRRNLRIVHLLSIRRAKPAAKSHIGC

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_7|456_bp
atgcgaacaatagacaccagggcctccttgaacagggaacgaagcaggataccattggaa
tctgaagctcccatcagccactacatctgtgaacctgaagaagacctgaagtacctgttt
aaaagacagccaaaagataggactaggaataacggactaggaacaggagctcgcatcctt
gcaacttccctatcctattaccaacgcttgtccgagaatctttcagacagcttggaagac
attacccaaagtactgtcatcatacaaaataaaatggagtccttggcagtagtcacttta
caaaatagaaggggactggatctccttctgaaaaaggtggcttatgtctttttcctagaa
gtatgctgtttttatgtcaggagaaatctcaggattgtccaccttctttcaatccgcaga
gccaagccagctgctaagagccatataggctgctga

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_8|108_aa
MLPCVPATPPPALAKKGQGAAQAMASEGASPKPWQSLSGVGPVGTQKARVEIGNLDFTGC
METPGCPHRSLLWRWSPYGKPLLGQRGGHMWVWSPHTESPLGHCLVEL

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_8|327_bp
atgttgccctgtgtcccagccactccacctccagctctggctaaaaagggccaaggtgca
gctcaggccatggcttcagagggtgcaagccccaagccttggcagtctctaagtggtgtt
gggcctgtgggtacacagaaggcaagagttgagattgggaacctagatttcacagggtgt
atggaaacacctggatgtccacacagaagtctgctgtggaggtggagcccttatggaaaa
cctctactaggacaacgtggagggcacatgtgggtttggagccctcatacagagtcccca
ctggggcactgcctagtagagctgtga

>gi568815575r:87603346_87804193|GENSCAN_predicted_peptide_9|447_aa
MGSWTEHLGEGGGCGHSFRRLKRSFLPSLKRAADLPAQHSSSAKGQTASSTGSLTPMSPD
WEMSPGRSRETPHIGDLWLASGGCISATKLPEEEIGSNLCCSAASTGDTQANRVLSGPPE
NSSRPAAEAPVRRKANKQKGIASTSTKRTSTQKPHLKIINFKDQRLNQEEVKSLNIPITS
SEIEAVINSLPTKKSPGSDGFTAEFYQRFKEELEASLVQHTQISKHNTSHKRTNDKNHTI
ISIDAEKAFNKIQHRFMLKTLNKLGIDGTYLKIIRAIYDKLTANIILNGQKLEAFPLKTG
TTQGFPLSPLLFNIILEFLARAISQEKEIKHIQIGKDEVKLSLFADDMIVYLEIPIVSAQ
NLLKLISNFSKVSGYKINVQKSQAFLYINNRQTEGQIMSELPFTIATKRIKYLGIQLTRD
VKDLFKENYKPMLKEIREDTNKWKAIT

>gi568815575r:87603346_87804193|GENSCAN_predicted_CDS_9|1344_bp
atggggagctggacggagcacctgggggaagggggcggctgtgggcacagcttcagaaga
cttaaacgttccttcctgccatctctgaagagagcagcggatctgccagcacagcactcg
agctctgctaagggacagactgcctcctctactgggtccctgaccccaatgtctcctgac
tgggagatgtctcctggcagaagtcgagagacacctcatataggggacctctggctggca
tctggtgggtgcatctctgcgacaaagcttccagaggaagaaataggcagcaatctttgc
tgttctgcagcctccactggtgatacccaggcaaacagggtcttgagtggacctccagaa
aactccagcagacctgcagcagaggcgcctgttagaaggaaagctaacaaacagaaagga
atagcatcaacatccacaaaaaggacatccacacaaaaaccccatctgaagatcatcaac
ttcaaagaccaaagactaaaccaggaagaagtcaaatccctgaatataccaataacaagt
tctgaaattgaggcagtaattaatagcctaccaacaaaaaaaagcccaggatcagatgga
ttcacagctgaattctaccagaggttcaaagaggagctggaagcaagcctggttcaacat
acacaaatcagtaaacataatacatcacataaaagaaccaatgacaaaaaccacacgatt
atctcaatagatgcagaaaaggccttcaataaaattcaacaccgcttcatgctaaaaact
ctcaataaactaggtattgatggaacgtatctcaaaataataagagctatttatgacaaa
ctcacagccaatatcatactgaatgggcaaaagctggaagcattccctttgaaaaccggc
acaacacaaggattccctctctcaccactcctattcaacataatattggaatttctggcc
agggcaatcagccaagagaaagaaataaagcatattcaaataggaaaagacgaagtcaaa
ttgtctctgtttgcagatgacatgattgtatatttagaaattcccattgtctcagcccaa
aatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaa
aaatcacaagcattcctatacatcaataatagacaaacagagggccaaattatgagtgaa
ctcccattcacaattgctacgaagagaataaaatacctaggaatacaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccaatgcttaaggaaataagagaggacaca
aacaaatggaaagccattacatga