GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:15:25

Sequence gi568815575r:77770808_77995410 : 224603 bp : 40.39% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  14800  14889   90  0  0  119   41   126 0.805   7.74
 1.02 PlyA +  16079  16084    6                               1.05

 2.03 PlyA -  16343  16338    6                               1.05
 2.02 Term -  19265  19131  135  2  0  104   37    80 0.148   1.54
 2.01 Init -  52242  52093  150  0  0   89  103    79 0.406   9.59
 2.00 Prom -  53321  53282   40                              -4.85

 3.02 PlyA -  55225  55220    6                               1.05
 3.01 Sngl -  74252  73581  672  2  0   49   48   273 0.705  15.32
 3.00 Prom -  74345  74306   40                              -6.15

 4.14 PlyA -  74510  74505    6                               1.05
 4.13 Term -  75584  75099  486  2  0  -56   32   479 0.507  21.61
 4.12 Intr -  84783  84694   90  0  0   94   79    77 0.989   6.67
 4.11 Intr -  86066  85926  141  2  0   79   97   106 0.999  10.23
 4.10 Intr -  86690  86550  141  2  0   72  101   115 0.731  10.83
 4.09 Intr - 100118 100001  118  1  1   56   95   153 0.968  12.35
 4.08 Intr - 104790 104636  155  0  2   99   26   101 0.544   2.95
 4.07 Intr - 124649 124358  292  1  1   67   32   160 0.034   4.51
 4.06 Intr - 125031 124897  135  2  0   55   -6   164 0.178   2.46
 4.05 Intr - 128779 128675  105  0  0   -5   55   163 0.319   2.11
 4.04 Intr - 137575 137507   69  0  0   29   97    84 0.304   0.78
 4.03 Intr - 139956 139662  295  1  1    6   63   190 0.279   3.44
 4.02 Intr - 147795 147633  163  0  1   76   61    80 0.101   2.73
 4.01 Init - 150467 150363  105  2  0   79  115    34 0.547   5.47
 4.00 Prom - 152560 152521   40                              -4.95

 5.00 Prom + 153691 153730   40                              -5.35
 5.01 Init + 160402 160522  121  0  1   56   74    71 0.053   2.90
 5.02 Term + 191816 192039  224  0  2  132   49   251 0.342  21.70
 5.03 PlyA + 194062 194067    6                               1.05

 6.02 PlyA - 194387 194382    6                               1.05
 6.01 Sngl - 198831 198067  765  0  0  111   49  1053 0.993  99.54
 6.00 Prom - 199079 199040   40                              -8.45

 7.00 Prom + 199997 200036   40                             -12.23
 7.01 Init + 200338 200385   48  0  0   71   97    21 0.736   2.30
 7.02 Intr + 200814 200954  141  2  0   80  115   129 0.946  14.43
 7.03 Intr + 217435 217924  490  0  1   76   90   452 0.737  35.85
 7.04 Intr + 218426 219151  726  0  0   70   91   492 0.816  38.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:77770808_77995410|GENSCAN_predicted_peptide_1|29_aa
FLGPKISKNDRDTKDRLRLRGLNPTGTKE

>gi568815575r:77770808_77995410|GENSCAN_predicted_CDS_1|90_bp
tttctaggcccaaagattagcaaaaatgaccgggataccaaagaccgcctccgacttcga
ggtctcaatcccacaggcaccaaagaataa

>gi568815575r:77770808_77995410|GENSCAN_predicted_peptide_2|94_aa
MERNQRKKAENSKNQNTSSLPKGHNSSPAREQNWTENEFDELTEVGFRRQVLYLLFPSKT
NKHIHKLRIYGQESEKGLGCLLWQFEEKCEDVYQ

>gi568815575r:77770808_77995410|GENSCAN_predicted_CDS_2|285_bp
atggagagaaaccagcgcaaaaaggctgaaaactccaaaaaccagaacacctcttctctt
ccaaagggtcacaactcctcaccagcaagggaacaaaactggacggagaatgagtttgat
gaattgacagaagtaggcttcagaaggcaggtactgtatctcttattcccttccaaaaca
aataagcacattcacaagttacgcatttatggtcaagagtcagagaaaggtctaggttgc
cttctgtggcaatttgaagaaaaatgtgaagatgtgtaccagtaa

>gi568815575r:77770808_77995410|GENSCAN_predicted_peptide_3|223_aa
MGDFNTPLSTLDRSTRQKVNKDIQELNSALHQADLIDIYRTLHPKSTEYTFFAAPHNTYS
KIDHIVGSKALLSKSKRTEIITNCLSDHGAIKLELRIKKLTQNHSTTWKLNSLLLNDYWV
HNKMKAEIKMFFETENKDTTYQNLWDTFKPVCRGKFIALNAHKRKQERSKIDTLTSQLKE
IEKQEQTHSKASRRQEITKIRSELKEIDTKNPSKKSVNPGAGF

>gi568815575r:77770808_77995410|GENSCAN_predicted_CDS_3|672_bp
atgggagactttaacaccccactgtcaacattagacagatccacgagacagaaggttaac
aaggatatccaggaattgaactcagctctgcaccaagcggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacattctttgcagcaccacacaacacctattcc
aaaattgaccacatagttggaagtaaagcactcctcagcaaaagtaaaagaacagaaatt
ataacaaactgtctctcagaccacggtgcaatcaaactagaactcaggattaagaaactc
actcagaaccactcaactacatggaaactgaacagcctgctcctgaatgactactgggta
cataacaaaatgaaggcagaaataaagatgttctttgaaaccgagaacaaagacacaaca
taccagaatctctgggacacatttaaaccagtgtgtagagggaaatttatagcactaaat
gcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaa
atagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatc
agatcagaactgaaggaaatagacacaaaaaacccttcaaaaaaatcagtgaatcctgga
gctggtttttga

>gi568815575r:77770808_77995410|GENSCAN_predicted_peptide_4|764_aa
MNKVTELSNSMPYLRTTTGMAEAYGMNGNNKEIVKLRFPLGKEEQHSQQLLLRNYTVSIC
PDLMTLRLKEAPPYNKVGHHHNKRLGGDKGSNKAHTIGEVTVAAAAAAAATTPPSASLFP
PPAAAASRLYPSLPRLPPLPGDAPAGSRAATGKRATGHVKRNAWSRASFSCPLLPPGRHA
ASSGSLLGDIKPGGWELNICTSTTTTVPVSRRFSALLTKGNIVKVKLELRQYSCCFGANS
LQVPLKILHEGGEFQGLLNESLKDSVLATSSHFGLRKLRNISQLRMRAWKAPSRSKVSLI
EGRGANMAARWRFWCVSVTMVVALLIVCDVPSASAQRKKEVRTRFPAAWAFPNDWGLRGS
VRLFPAPFPCRFYAFGGFNYAVFGVVEFMVLSEKVSQLMEWTNKRPVIRMNGDKFRRLVK
APPRNYSVIVMFTALQLHRQQADEEFQILANSWRYSSAFTNRIFFAMVDFDEGSDVFQML
NMNSAPTFINFPAKGKPKRGDTYELQVRGFSAEQIARWIADRTDVNIRVIRPPNYAGPLM
LGLLLAVIGGLVYLRRSNMEFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHT
GHVLKEEVRTHGKEVKNLEKRLDEWLTRITNAKKSLKDLMELKTTARELRDECRSLSSRF
DQLEERVSVMEDQMNEMKQEEKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDKENG
TKLENTAGYYPGELPQSSKAGEHSNSGDTENATKIFLEKSNSKT

>gi568815575r:77770808_77995410|GENSCAN_predicted_CDS_4|2295_bp
atgaataaagttacagagttgtcaaacagcatgccatatttaaggaccaccactggtatg
gctgaggcatatggcatgaatggtaacaacaaggagattgtaaagctaagattcccattg
ggaaaggaagaacagcacagccagcaactacttctcaggaactatactgtcagtatctgc
cctgatctcatgactctgagattaaaagaagctcctccttataacaaggttggacatcac
cataataaaagattgggaggagacaaaggctccaacaaagctcacacaatcggagaagtc
acagtagctgcggctgcggcggcggcagcaacaactcctccctctgcttctcttttccca
ccccccgccgcggcggccagccgcctttacccctccctccctcgactacccccacttccg
ggtgatgcccctgccggaagcagggccgccacgggaaagagagcgactggtcacgtgaaa
aggaacgcgtggtctagagccagcttctcctgccccctgctgcccccgggccgacacgca
gcctcgagtgggtctttgttaggtgacattaagccaggaggatgggaactcaacatctgt
acctctacaactaccacagtacccgtgtctagacgatttagtgcgcttttgaccaaggga
aacatcgtgaaggtgaagctagaactgcggcaatacagctgctgctttggtgccaattcg
cttcaggtacccttgaaaatattacatgaaggcggcgaatttcaaggacttctaaatgag
tctttgaaagattctgttctagcaacttcaagccattttggactccgaaaactccgcaat
atttcacaactgcgcatgcgtgcttggaaagcacctagccggagcaaagtttcacttata
gaagggagaggagcgaacatggcagcgcgttggcggttttggtgtgtctctgtgaccatg
gtggtggcgctgctcatcgtttgcgacgttccctcagcctctgcccaaagaaagaaggag
gtgagaacgcggtttccagcagcatgggcttttcccaatgactggggcttaagagggtct
gttcgcctcttcccagccccctttccctgccgcttctatgcctttggtggcttcaattac
gcggttttcggagttgtggaattcatggtgttatctgaaaaggttagtcagctgatggaa
tggactaacaaaagacctgtaataagaatgaatggagacaagttccgtcgccttgtgaaa
gccccaccgagaaattactccgttatcgtcatgttcactgctctccaactgcatagacag
caagctgatgaagaattccagatcctggcaaactcctggcgatactccagtgcattcacc
aacaggatattttttgccatggtggattttgatgaaggctctgatgtatttcagatgcta
aacatgaattcagctccaactttcatcaactttcctgcaaaagggaaacccaaacggggt
gatacatatgagttacaggtgcggggtttttcagctgagcagattgcccggtggatcgcc
gacagaactgatgtcaatattagagtgattagacccccaaattatgctggtccccttatg
ttgggattgcttttggctgttattggtggacttgtgtatcttcgaagaagtaatatggaa
tttctctttaataaaactggatgggcttttgcagctttgtgttttgtgcttgctatgaca
tctggtcaaatgtggaaccatataagaggaccaccatatgcccataagaatccccacacg
ggacatgtgctaaaggaggaagttcgaacccatggcaaagaagttaaaaaccttgaaaaa
aggttagacgaatggctaactagaataaccaatgcaaagaagtccttaaaggacctgatg
gagctgaaaaccacggcacgagagctacgtgatgaatgcagaagcctcagtagccgattc
gatcagctggaagaaagggtatcagtgatggaagatcaaatgaatgaaatgaagcaagaa
gagaagtttagagaaaaaagaataaaaagaaacgaacaaagcctccaagaaatatgggac
tatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacaaagagaatgga
accaagttggaaaacactgcaggatattatccaggagaacttccccaatctagcaaggca
ggcgaacattcaaattcaggagatacagagaacgccacaaagatattcctcgagaagagc
aactccaagacataa

>gi568815575r:77770808_77995410|GENSCAN_predicted_peptide_5|114_aa
MIVNEHAAFKHLFNKAHLAPPLIHSTLSGHSTCFREHRVGDPSSASSLGIAVSLGRPVLS
RSSSGTVDLLEEVGLQIRDTAFSSTKLLEAISTVSAQVEELAVKCTENARFLKT

>gi568815575r:77770808_77995410|GENSCAN_predicted_CDS_5|345_bp
atgattgttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccattcaactctgagtggacacagcacatgtttcagagagcacagggttggg
gacccttcttcagcatcttccctgggcattgctgtgagtttaggccggcccgttttgagc
aggagcagcagcggaacagtagacctgctggaggaagtggggctgcagatcagagacaca
gcattttcgtcaaccaaacttcttgaagccatatctacagtatcagctcaagtggaagag
cttgccgtcaaatgtacggaaaatgcacgtttccttaaaacatga

>gi568815575r:77770808_77995410|GENSCAN_predicted_peptide_6|254_aa
MAAYKLVLIRHGESTWNLENRFSCWYDADLSPAGHEEAKRGGQALRDAGYEFDICLTSVQ
KRVIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD
VPPPPMEPDHPFYSNISKDRRYADLTEDQLPSYESPKDTIARALPFWNEEIVPQIKEGKR
VLIAAHGNSLQGIAKHVEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVC
KAIEAVAAQGKAKK

>gi568815575r:77770808_77995410|GENSCAN_predicted_CDS_6|765_bp
atggccgcctacaaactggtgctgatccggcacggcgagagcacatggaacctggagaac
cgcttcagctgctggtacgacgccgatctgagcccggcgggccacgaggaggcgaagcgc
ggcgggcaggcgctacgagatgctggctatgagtttgacatctgcctcacctcagtgcag
aagagagtgatccggaccctctggacagtgctagatgccattgatcagatgtggctgcca
gtggtgaggacttggcgcctcaatgagcggcactatgggggtctaaccggtctcaataaa
gcagaaactgctgcaaagcatggtgaggcccaggtgaagatctggaggcgctcctatgat
gtcccaccacctccgatggagcccgaccatcctttctacagcaacatcagtaaggatcgc
aggtatgcagacctcacagaagatcagctaccctcctatgagagtccgaaggatactatt
gccagagctctgcccttctggaatgaagaaatagttccccagatcaaggaggggaaacgt
gtactgattgcagcccatggcaacagcctccagggcattgccaagcatgtggagggtctc
tctgaagaggctatcatggagctgaacctgccgactggtattcccatcgtctatgaattg
gacaagaacttgaagcctatcaagcccatgcagtttctgggggatgaagagacggtgtgc
aaagccatagaagctgtggctgcccagggcaaggccaagaagtga

>gi568815575r:77770808_77995410|GENSCAN_predicted_peptide_7|469_aa
MTGTEKGLVSGRRGGQECNEEIKMDPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVH
HIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNPDPLPVLTDTLFLTVTASLT
LPWDHIQSTLLKTKGVTDIKIYPQKRTVAVTIIPSIVNANQIKELVPELSLDTGTLEKKS
GACEDHSMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQP
HLISVEEMKKQIEAMGFPAFVKKQPKYLKLGAIDVERLKNTPVKSSEGSQQRSPSYTNDS
TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVTPESLRKAIEA
VSPGLYRVSITSEVESTSNSPSSSSLQKIPLNVVSQPLTQETVINIDGMTCNSCVQSIEG
VISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLSX

>gi568815575r:77770808_77995410|GENSCAN_predicted_CDS_7|1407_bp
atgactggcacagagaagggtttggtgagtggtagaagaggaggccaggaatgtaatgag
gaaatcaaaatggatccaagtatgggtgtgaattctgttaccatttctgttgagggtatg
acttgcaattcctgtgtttggaccattgagcagcagattggaaaagtgaatggtgtgcat
cacattaaggtatcactggaagaaaaaaatgcaactattatttatgaccctaaactacag
actccaaagaccctacaggaagctattgatgacatgggctttgatgctgttatccataat
cctgaccctctccctgttttaactgacaccttgtttctgactgttacggcgtcactgact
ttgccatgggaccatatccaaagcacattgctgaagaccaagggtgtgacagacattaaa
atttaccctcagaaaagaactgtagcagtgacaataatcccttctatagtgaatgccaat
cagataaaagagctggttccagaactcagtttagatactgggacactggagaaaaagtca
ggagcttgtgaagatcatagtatggctcaagctggtgaagtcgtgctgaagatgaaagtg
gaagggatgacctgccattcatgtactagcactattgaaggaaaaattgggaaactgcaa
ggtgttcagcgaattaaagtctccctggacaatcaagaagctactattgtttatcaacct
catcttatctcagtagaggaaatgaaaaagcagattgaagctatgggctttccagcattt
gtcaaaaagcagcccaagtacctcaaattgggagctattgatgtagaacgtctaaagaac
acaccagttaaatcctcagaagggtcacagcaaaggagtccatcatataccaatgattca
acagccactttcatcattgatggcatgcattgtaaatcatgtgtgtcaaatattgaaagt
actttatctgcactccaatatgtaagcagcatagtagtttctttagagaataggtctgcc
attgtgaagtataatgcaagctcagtcactccagaatccctgagaaaagcaatagaggct
gtatcaccggggctatatagagttagtatcacaagtgaagttgagagtacctcaaactct
ccctccagctcatctcttcagaagattcctttgaatgtagttagccagcctctgacacaa
gaaactgtgataaacattgatggcatgacttgtaattcctgtgtgcagtctattgagggt
gtcatatcaaaaaagccaggtgtaaaatccatacgagtctcccttgcaaatagcaatggg
actgttgagtatgatcctctactaacctctccagaaacgttgagaggagcaatagaagac
atgggatttgatgctaccttgtcagnn