GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:17:06

Sequence gi568815575r:47347433_47567481 : 220049 bp : 44.70% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2916   2926   11  2  2   84   87    17 0.048   1.07
 1.02 Intr +  18943  19069  127  1  1   56   70   124 0.324   8.08
 1.03 Term +  33353  33850  498  1  0  109   42  1125 0.999 104.52
 1.04 PlyA +  33954  33959    6                               1.05

 2.00 Prom +  49474  49513   40                              -4.86
 2.01 Init +  50366  50497  132  1  0   56   97    61 0.589   3.95
 2.02 Intr +  62844  62970  127  2  1   26   68   175 0.808   9.55
 2.03 Intr +  63248  63343   96  0  0   91  111   114 0.991  13.98
 2.04 Term +  64937  66162 1226  0  2   46   49   833 0.985  66.99
 2.05 PlyA +  70887  70892    6                               1.05

 3.03 PlyA -  71729  71724    6                               1.05
 3.02 Term -  91668  91339  330  0  0  -37   48   347 0.948  12.86
 3.01 Init -  96119  96117    3  2  0   98   53     0 0.168  -2.50
 3.00 Prom -  96256  96217   40                              -4.76

 4.07 PlyA -  96568  96563    6                              -0.45
 4.06 Term - 102042  99998 2045  1  2  133   54  1400 0.829 126.47
 4.05 Intr - 108686 108489  198  0  0   81  109    72 0.895   7.92
 4.04 Intr - 108966 108840  127  0  1   98   94   163 0.884  18.15
 4.03 Intr - 123633 123576   58  2  1   62   92    49 0.005   1.59
 4.02 Intr - 135871 135692  180  0  0   69   52   132 0.002   6.68
 4.01 Init - 149307 149207  101  0  2   60   27   102 0.119   1.03
 4.00 Prom - 163997 163958   40                              -6.16

 5.02 PlyA - 164013 164008    6                               1.05
 5.01 Sngl - 166141 165170  972  1  0   99   40   897 0.996  80.75
 5.00 Prom - 182364 182325   40                              -5.66

 6.00 Prom + 190757 190796   40                              -3.56
 6.01 Init + 209051 209080   30  1  0   94   93    38 0.671   3.02
 6.02 Intr + 213291 213384   94  2  1   50   53    91 0.742   1.34
 6.03 Intr + 213697 213987  291  2  0    3   23   250 0.181   7.11
 6.04 Intr + 215531 215631  101  0  2   12   89   122 0.112   4.53
 6.05 Intr + 215794 215897  104  0  2   47   84   170 0.289  11.47
 6.06 Intr + 217365 217467  103  0  1  112   59   182 0.956  17.88
 6.07 Intr + 217553 217707  155  1  2   64   53   135 0.977   6.47
 6.08 Intr + 217820 217918   99  2  0   78   91    29 0.685   1.43
 6.09 Intr + 219207 219348  142  0  1   74   77   168 0.845  14.66
 6.10 Intr + 219452 219479   28  1  1  133  101     1 0.876   3.59
 6.11 Intr + 219554 219699  146  0  2   98   56   103 0.997   8.10
 6.12 Intr + 219798 220000  203  2  2   61   94   306 0.954  26.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:47347433_47567481|GENSCAN_predicted_peptide_1|211_aa
MIEFPLYGMGAKMAAPKRHDIAQPYSSPDNATHGPSLRRSVTALCSEEQEKQEEEDEQER
KEEEKEEEEEQEEEKEKEEQEEEKEKEEQEEEKEKEEEQEEQEKEKEEQEEEEKEKEEEE
EEEQEEEEQEEEKEKEEEQEEEEQEEEEKEKEEEQKEKEQEEEEQEEEEKEKEEEQKEKE
QEEEKQQEEEQQEEEEQEEEQGAIIILERQF

>gi568815575r:47347433_47567481|GENSCAN_predicted_CDS_1|636_bp
atgattgaattcccactgtacggaatgggtgctaagatggcggctcccaagagacacgac
atagcgcagccatattcctcgcctgacaacgccactcatggaccaagtctccgccgatcc
gtaacagcgctgtgttcagaggaacaggagaagcaggaggaggaggatgagcaggagaga
aaggaggaggagaaagaggaggaagaggagcaggaggaggagaaagagaaggaggagcag
gaggaggagaaagagaaggaggagcaggaggaggagaaagagaaggaggaggaacaggag
gagcaggagaaagaaaaggaggagcaggaggaggaggagaaagagaaggaggaggaggag
gaagaggagcaggaggaggaggagcaggaggaggagaaagagaaggaggaagagcaggag
gaggaggagcaggaggaggaggagaaagagaaggaggaagagcagaaggagaaagagcag
gaggaggaggagcaggaggaggaggagaaagagaaggaggaagagcagaaggagaaagag
caggaggaggagaagcagcaggaggaggagcagcaggaggaagaggagcaggaggaggag
cagggagcaattattattttagagagacagttttaa

>gi568815575r:47347433_47567481|GENSCAN_predicted_peptide_2|526_aa
MRSLKWPCGSLSFQFNEITVVSLGGSFPPFGTETPTPVEHNIMKGSVSFEDVAVDFTRQE
WHRLDPAQRTMHKDVMLETYSNLASVGLCVAKPEMIFKLERGEELWILEEESSGHGYSGS
LSLLCGNGSVGDNALRHDNDLLHHQKIQTLDQNVEYNGCRKAFHEKTGFVRRKRTPRGDK
NFECHECGKAYCRKSNLVEHLRIHTGERPYECGECAKTFSARSYLIAHQKTHTGERPFEC
NECGKSFGRKSQLILHTRTHTGERPYECTECGKTFSEKATLTIHQRTHTGEKPYECSECG
KTFRVKISLTQHHRTHTGEKPYECGECGKNFRAKKSLNQHQRIHTGEKPYECGECGKFFR
MKMTLNNHQRTHTGEKPYQCNECGKSFRVHSSLGIHQRIHTGEKPYECNECGNAFYVKAR
LIEHQRMHSGEKPYECSECGKIFSMKKSLCQHRRTHTGEKPYECSECGNAFYVKVRLIEH
QRIHTGERPFECQECGKAFCRKAHLTEHQRTHIGWSWRCTMKKASH

>gi568815575r:47347433_47567481|GENSCAN_predicted_CDS_2|1581_bp
atgagaagccttaagtggccgtgtggcagtcttagcttccagttcaatgaaatcactgtt
gtatctcttggtggaagctttcctccttttggaacagagacccctacaccagtggagcat
aatatcatgaaggggtccgtgtcattcgaggatgtggctgtggatttcacccgacaggag
tggcacagactggaccctgctcagaggaccatgcacaaggatgtgatgctggagacctac
agcaacctggcatctgtgggcctctgcgtggccaaaccagagatgatcttcaagttggag
cgaggagaagagctgtggatattagaggaggaatcctcaggccatggttactcaggatct
ctctcactgctgtgtggcaatggttctgttggggataatgccctcaggcatgataatgac
cttcttcaccatcagaagattcaaacattggatcaaaatgttgaatataatggatgcagg
aaagccttccatgagaaaacaggctttgttagacgtaaaagaacacccagaggagataaa
aactttgaatgtcatgaatgtgggaaagcttactgtaggaagtcaaaccttgttgaacat
ctgagaatacacacaggagagagaccctatgaatgcggtgaatgtgcaaaaaccttcagt
gcaagatcatacctcattgctcatcagaaaactcacacaggggagaggccctttgaatgt
aatgaatgtgggaaatcttttggcaggaagtcacaactcatcctacatacaagaacacac
actggagagagaccctatgaatgtactgaatgtgggaaaaccttttctgagaaggcaacc
ctcacgattcatcagagaactcacacaggggagaaaccctatgaatgtagtgaatgtggg
aaaacatttcgtgtaaagatatcccttacccaacaccacagaactcatacaggggagaaa
ccttatgaatgtggggagtgtgggaaaaacttccgtgcaaagaaatccctaaatcagcat
caaagaattcacacaggtgagaaaccctatgagtgtggtgaatgtgggaaattcttccga
atgaagatgactctcaataatcatcaaagaactcacacaggtgaaaagccctatcagtgt
aatgaatgtgggaaatctttcagggtgcactcatctcttgggatccatcagagaattcac
acaggagagaaaccttacgaatgtaatgagtgtggtaatgctttctatgtgaaagcacgc
ctaattgaacatcagaggatgcattcaggagagaaaccctacgaatgtagtgaatgtggg
aaaatcttcagtatgaagaaatccctttgtcaacaccggagaactcacacaggagagaaa
ccttatgaatgtagtgaatgtggaaatgccttctatgtgaaagtacgcctcattgaacat
cagcgaattcacacaggagagagaccctttgagtgtcaagaatgtgggaaagctttctgc
cggaaagcacacctcacagaacatcagagaactcacataggctggtcctggcgttgtaca
atgaagaaagcctctcactga

>gi568815575r:47347433_47567481|GENSCAN_predicted_peptide_3|110_aa
MHLEAVEESDEEEDAKSLSLSGKQSAPGSSSKYPHKLKLATDEDEYDEEDDEDGEHNEET
EEKAPVEKSIRGTPAKNTQKSNEMKMTHYHQHQDQKSRILSKTGKNLLKH

>gi568815575r:47347433_47567481|GENSCAN_predicted_CDS_3|333_bp
atgcacttagaagctgtggaggagtcagatgaagaggaggatgccaaatccctaagtcta
tctggaaagcaatctgcccctggaagcagcagcaagtatccacataaactaaaacttgct
actgatgaagatgaatatgatgaggaagatgatgaagatggtgaacataatgaggaaact
gaagaaaaagccccagtggagaaatctatacgaggcactccagccaaaaatacacaaaaa
tcaaacgagatgaaaatgactcactaccatcaacaccaagatcagaagtcaagaatcctt
tcaaaaacaggaaaaaacctcctaaaacattga

>gi568815575r:47347433_47567481|GENSCAN_predicted_peptide_4|902_aa
MDVESTAGEDSEEVKKMVEKVYIILEKTCIIISISTVPGAESPQPSAPTEVKLSLLATSA
SWPKSDTHDSPRGNCTGSVTAETPSVSRSRPGSRWTVDLNVKAKMIKLLHDPEASVSFED
VTVDFSKEEWQHLDPAQRRLYWDVTLENYSHLLSVVKCVYFSEKQRESVTERPLKPNQLD
PIVYHVLLTGYQIPKSEAAFKLEQGEGPWMLEGEAPHQSCSGEAIGKMQQQGIPGGIFFH
CERFDQPIGEDSLCSILEELWQDNDQLEQRQENQNNLLSHVKVLIKERGYEHKNIEKIIH
VTTKLVPSIKRLHNCDTILKHTLNSHNHNRNSATKNLGKIFGNGNNFPHSPSSTKNENAK
TGANSCEHDHYEKHLSHKQAPTHHQKIHPEEKLYVCTECVMGFTQKSHLFEHQRIHAGEK
SRECDKSNKVFPQKPQVDVHPSVYTGEKPYLCTQCGKVFTLKSNLITHQKIHTGQKPYKC
SECGKAFFQRSDLFRHLRIHTGEKPYECSECGKGFSQNSDLSIHQKTHTGEKHYECNECG
KAFTRKSALRMHQRIHTGEKPYVCADCGKAFIQKSHFNTHQRIHTGEKPYECSDCGKSFT
KKSQLHVHQRIHTGEKPYICTECGKVFTHRTNLTTHQKTHTGEKPYMCAECGKAFTDQSN
LIKHQKTHTGEKPYKCNGCGKAFIWKSRLKIHQKSHIGERHYECKDCGKAFIQKSTLSVH
QRIHTGEKPYVCPECGKAFIQKSHFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIH
TGEKPNICAECGKAFTDRSNLITHQKIHTREKPYECGDCGKTFTWKSRLNIHQKSHTGER
HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
SD

>gi568815575r:47347433_47567481|GENSCAN_predicted_CDS_4|2709_bp
atggatgttgaaagcactgctggtgaggactcagaagaagtaaagaagatggtagagaaa
gtctatatcatcttagagaagacatgtatcatcataagcatatccacggtcccgggcgct
gaatccccgcaaccctctgcgcccacagaggttaaactctcgctgctggcgacttccgct
tcctggcctaaatctgacacgcacgactccccccgcggcaactgcacaggttcggtgaca
gccgagacgccgagtgtttcccgcagccggccggggtccagatggactgtggacctaaat
gtgaaagctaaaatgataaaacttttacatgaccctgaggcttcagtgtcatttgaggac
gtgactgtggacttcagcaaggaggagtggcagcacttggaccctgcccagagacgcctg
tactgggatgtgacactagagaactacagccacctgctctcagtggtgaaatgtgtttac
ttttctgaaaagcaaagggaaagtgtcactgaaaggcccctgaaacccaatcagctggac
ccaatcgtgtatcatgtcctgttaacagggtaccaaattcccaagtcagaggctgccttc
aagttggagcaaggagaggggccatggatgctggagggggaagccccacatcagagctgt
tcaggtgaggctattgggaaaatgcagcaacagggaattcctggaggaattttcttccac
tgtgagagatttgatcaacccataggagaagattcattatgttctattttagaagaactg
tggcaagataatgaccagctagagcaacgtcaggaaaaccagaataaccttttaagtcat
gtgaaagtattgattaaggagaggggctatgaacataaaaacattgaaaaaataattcat
gtgactaccaagcttgttccttcaattaaaagactccataactgtgacacaattttgaag
catactttaaactcacataatcataatagaaacagtgcaacaaagaaccttggcaagatt
tttggaaatggtaacaatttcccccatagcccttcctctactaagaatgagaatgctaaa
acaggagcaaattcctgtgaacatgaccactatgaaaaacatctcagccacaaacaagct
cccacccaccatcagaaaattcatcctgaggagaagctttatgtgtgtactgaatgtgta
atgggcttcactcagaagtcacatctgtttgagcatcagagaattcatgctggagaaaag
tcccgtgaatgtgacaaaagcaacaaagtcttcccccagaaaccccaggttgatgtacat
ccaagtgtttatacaggagaaaaaccctatctgtgtactcaatgtgggaaagtctttacc
ctcaaatcaaacctcattacacatcaaaaaattcataccgggcagaaaccctacaaatgc
agtgaatgtggaaaagcctttttccagagatcagacctctttagacatctgagaattcat
acaggagaaaaaccttatgaatgcagtgaatgtggaaaaggcttctcccagaactcagac
ctcagtatacatcagaaaactcataccggagagaaacactatgaatgcaatgaatgtggg
aaggctttcacaagaaaatcagcactcaggatgcatcagagaatccacacgggagagaaa
ccttatgtatgcgctgactgtgggaaggccttcatccagaaatcacatttcaacacacat
cagagaattcatactggagaaaagccgtatgaatgcagtgactgtgggaaatccttcact
aagaagtcacaactccatgtgcatcaaagaattcacaccggagagaaaccctatatatgt
acagaatgtggaaaggtcttcactcacaggacaaacctcaccacacatcagaaaactcat
actggggaaaaaccctatatgtgtgctgaatgtggaaaggcttttactgaccagtcaaat
ctcattaaacaccagaaaactcacactggagagaaaccctataagtgcaatggctgtgga
aaagccttcatatggaagtcgcgcctcaaaatacatcagaaatctcatattggagagaga
cactatgaatgcaaggactgcgggaaagccttcatccagaaatcaacactaagcgtgcat
cagagaatccatacaggagagaaaccgtacgtttgtcctgaatgcgggaaggcctttatc
cagaaatcgcacttcattgcgcatcatagaatccatactggagagaagccttatgaatgc
agcgactgtgggaaatgcttcactaagaagtcacaactccgtgtgcatcagaaaatccac
acaggtgagaagcccaatatatgtgctgaatgtggaaaggccttcactgaccgatcaaat
ctcataacacatcagaaaatccacactagggagaaaccctatgaatgtggtgactgcggg
aaaaccttcacctggaagtcacgcctcaatatacatcagaagtctcatactggagaaaga
cactatgaatgtagtaaatgtgggaaagctttcatccagaaagccacactaagtatgcat
cagataattcatacaggaaagaaaccttatgcttgtacagaatgtcagaaggcctttact
gacagatcgaatctcattaaacaccagaaaatgcatagtggagaaaaacgctataaagcc
agtgactga

>gi568815575r:47347433_47567481|GENSCAN_predicted_peptide_5|323_aa
MARAAAGADKKPSRCGSGREGEGLSEGHKSMTGLYELVWRVLHALLCLHRTLTSWLRVRF
GTWNWIWRRCCRAASAAVLAPLGFTLRKPPAVGRNRRHHRHPRGGSCLAAAHHRMRWRAD
GRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMD
EILKQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQL
VAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL
NISYEDFFSALRQYAACEQRLGK

>gi568815575r:47347433_47567481|GENSCAN_predicted_CDS_5|972_bp
atggcccgcgcggccgcaggggcggataaaaagccgtcgcgctgcgggagtgggcgggag
ggagaggggttgtccgagggccacaagagtatgacggggctgtacgagctggtgtggcgg
gtgctgcacgcgctgctctgtctgcaccgcacgctcacctcctggctccgcgttcggttc
ggcacctggaactggatctggcggcgctgctgccgagccgcctctgccgcggtcctagcg
ccgctcggcttcacgctccgcaagcccccggcagtcggcaggaaccgccgtcaccaccgg
cacccgcgcggggggtcgtgcctggcagccgcacaccaccggatgcgctggcgcgcggac
ggtcgttccttggagaagctgcctgtgcatatgggcctggtgatcaccgaggtggagcag
gaacccagcttctcggacatcgcgagcctcgtggtgtggtgtatggccgtgggcatctcc
tacattagcgtctacgaccaccaaggtattttcaaaagaaataattccagattgatggat
gaaattttaaaacaacagcaagaacttctgggcctagattgttcaaaatactcaccagaa
tttgcaaatagtaatgacaaagacgatcaagttttaaattgccatttggcagtgaaggtg
ctgtctccggaagatggaaaagcagatattgtaagagctgctcaggacttttgccagtta
gtggcccagaagcaaaagagacccacagatttggatgtagatacgttaggcagtttactt
agttcaaatggttgtcctgatcctgatttagtattgaagttcggtcctgtggacagcaca
ttaggctttcttccctggcacatcagattgactgagattgtctctttgccttcccaccta
aacatcagttatgaggactttttctctgcccttcgtcaatatgcagcctgtgaacagcgt
ctgggaaagtag

>gi568815575r:47347433_47567481|GENSCAN_predicted_peptide_6|499_aa
MALSRPQQGPRPAVLKGYELQSPRAGEHRRSLVLIPTHFKDGWKAESRRANNESPRGDGG
GLCEETRREAQDGDGGGCSGVTGEGGPGRARFLERLPGTGREPGPKAQLQDGCAWAPAFP
ARNRRSGLTRGETIVDSGGSMEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMS
VYDSLDKALKVRGLNQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHN
FVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQFYHSVQD
LSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHM
VSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSKSPAEQRE
RKSLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKV
SQPTAEQAQAFKNEMQVLS

>gi568815575r:47347433_47567481|GENSCAN_predicted_CDS_6|1497_bp
atggcgctctccaggccgcagcaggggccgagacccgctgtcctcaaaggctatgaacta
cagtctcctagagctggtgaacatcgccgatcattggttctgattccaacccatttcaaa
gatgggtggaaggctgagtcccgcagagccaataacgagagtccgagaggcgacggaggc
ggactctgtgaggaaacaagaagagaggcccaagatggagacggcggcggctgtagcggc
gtgacaggtgagggcgggcccgggagggctcggtttctggagcggctgccgggcacgggc
agggagcccggaccgaaagctcagctccaggatggctgcgcctgggccccggcgttccct
gcccggaaccggaggagtggtttgacccggggcgagaccatcgtcgacagcgggggctcc
atggagccaccacggggcccccctgccaatggggccgagccatcccgggcagtgggcacc
gtcaaagtatacctgcccaacaagcaacgcacggtggtgactgtccgggatggcatgagt
gtctacgactctctagacaaggccctgaaggtgcggggtctaaatcaggactgctgtgtg
gtctaccgactcatcaagggacgaaagacggtcactgcctgggacacagccattgctccc
ctggatggcgaggagctcattgtcgaggtccttgaagatgtcccgctgaccatgcacaat
tttgtacggaagaccttcttcagcctggcgttctgtgacttctgccttaagtttctgttc
catggcttccgttgccaaacctgtggctacaagttccaccagcattgttcctccaaggtc
cccacagtctgtgttgacatgagtaccaaccgccaacagttctaccacagtgtccaggat
ttgtccggaggctccagacagcatgaggctccctcgaaccgccccctgaatgagttgcta
accccccagggtcccagcccccgcacccagcactgtgacccggagcacttccccttccct
gccccagccaatgcccccctacagcgcatccgctccacgtccactcccaacgtccatatg
gtcagcaccacggcccccatggactccaacctcatccagctcactggccagagtttcagc
actgatgctgccggtagtagaggaggtagtgatggaaccccccgggggagccccagccca
gccagcgtgtcctcggggaggaagtccccacattccaagtcaccagcagagcagcgcgag
cggaagtccttggccgatgacaagaagaaagtgaagaacctggggtaccgggactcaggc
tattactgggaggtaccacccagtgaggtgcagctgctgaagaggatcgggacgggctcg
tttggcaccgtgtttcgagggcggtggcatggcgatgtggccgtgaaggtgctcaaggtg
tcccagcccacagctgagcaggcccaggctttcaagaatgagatgcaggtgctcagn