GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:21:48

Sequence gi568815575r:24329576_24529920 : 200345 bp : 42.05% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6963   7704  742  1  1   35    7   379 0.326  14.07
 1.02 Term +   7842   9048 1207  0  1   67   47   290 0.550  12.94
 1.03 PlyA +   9084   9089    6                              -0.45

 2.00 Prom +   9380   9419   40                              -3.65
 2.01 Init +  16144  16369  226  0  1   90   14   144 0.936   5.88
 2.02 Intr +  17148  17371  224  1  2   53   51   194 0.787   9.12
 2.03 Intr +  29428  29513   86  0  2   61   97    53 0.178   1.20
 2.04 Intr +  32503  32648  146  1  2   60   64   132 0.156   7.01
 2.05 Intr +  32776  32886  111  2  0   65   49   121 0.091   5.33
 2.06 Intr +  32942  32983   42  0  0  111   80    31 0.349   1.89
 2.07 Intr +  33166  35781 2616  2  0  103   69  2416 0.777 227.58
 2.08 Intr +  39111  39363  253  1  1   43   86   119 0.542   2.77
 2.09 Intr +  43316  43460  145  2  1   41   86   114 0.479   5.86
 2.10 Intr +  48406  48571  166  0  1   64   30    91 0.020  -0.49
 2.11 Intr +  58772  58917  146  0  2  112   85    45 0.001   5.68
 2.12 Intr +  78672  78803  132  2  0   49   92    73 0.115   3.72
 2.13 Term +  82522  82563   42  0  0  144   48    47 0.592   2.48
 2.14 PlyA +  84485  84490    6                               1.05

 3.04 PlyA -  84531  84526    6                               1.05
 3.03 Term -  95678  95559  120  2  0   93   53    61 0.793   0.59
 3.02 Intr -  97235  97094  142  1  1   55   44    91 0.499   0.83
 3.01 Init - 100345 100002  344  1  2   75   75   359 0.854  30.05
 3.00 Prom - 106678 106639   40                              -5.35

 4.00 Prom + 113919 113958   40                              -1.95
 4.01 Init + 135881 136312  432  1  0   77   26   327 0.001  21.66
 4.02 Intr + 151333 151364   32  0  2   76  110    21 0.008  -0.89
 4.03 Intr + 156056 156090   35  2  2   59   98    60 0.126   1.05
 4.04 Intr + 165167 165308  142  0  1   49  111   109 0.770   7.79
 4.05 Intr + 169254 169325   72  0  0  140   97    46 0.997   8.30
 4.06 Intr + 173752 173936  185  1  2  106   98   151 0.996  16.41
 4.07 Intr + 175634 175723   90  0  0   95  116    44 0.906   6.95
 4.08 Intr + 189358 189435   78  2  0  104   53   100 0.802   6.70
 4.09 Intr + 196623 196699   77  1  2  104  115   -30 0.355  -0.38
 4.10 Intr + 197999 198100  102  1  0   33   88    97 0.341   3.65
 4.11 Intr + 198501 198611  111  2  0   33   99    77 0.353   2.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 182866 182924   59  0  2   86   82    33 0.815  -0.74
S.002 Intr + 183904 184124  221  1  2   66   44   178 0.935   8.22


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:24329576_24529920|GENSCAN_predicted_peptide_1|649_aa
XRLIKKKTEKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYT
LPRLNQEEVESLNRPITGSEIVAIINSLPTKNSPGPDGFTAEFYQRYKEELVPFLLRLFQ
STEKEGILLNSFYEASIILIPKPDRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKK
LIHHDQVGFIPGMQGWFNICKSINVIQHINRTKDKNHMIISIDAEKAFDKIQQPFMLKTL
NKLGIDGTVGSWAISQEKEIKGIQLAKEEVKLSLFADDMIGYLENPIVSAQNLLKLISNF
SKVSGYKINVQKSQAFLYTNSRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENY
KPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTL
KFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTESS
EIMSHIYNHLNFDKPDKNKKWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIK
DLHVRPKTIKILEENLGNTIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKET
TIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKNTTPSKSGQRI

>gi568815575r:24329576_24529920|GENSCAN_predicted_CDS_1|1950_bp
ncaagactaataaagaagaaaacagagaagaatcaaatagacgcaataaaaaatgataaa
ggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatactacaaacac
ctctacgcaaataaactagaaaatctagaagaaatggataaattcctcgacacatacacc
ctcccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaa
attgtggcaataatcaatagcttaccaaccaaaaacagtccaggaccagacggattcaca
gccgaattctaccagaggtacaaggaggagctggtaccattccttctgagactattccaa
tcaacagaaaaagagggaatcctccttaactcattttatgaggccagcatcatcctgata
ccaaagcctgacagagacacaaccaaaaaagagaattttagaccaatatccttgatgaac
attgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaag
cttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatatgc
aaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatgattatc
tcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaactctc
aataaattaggtattgatgggactgttggaagttgggcaattagtcaggagaaggaaata
aagggtattcaattagcaaaagaggaagtcaaattgtccctgtttgcagatgacatgatt
ggatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttc
agcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaat
agcagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagaga
ataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactac
aaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctca
tgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttatagattt
aatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaactacttta
aagttcatatggaaccaaaaaagagcccgcatcgccaaatcaatcctaagccaaaagaac
aaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaa
acagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagagtcctca
gaaataatgtcacatatctacaaccatctgaactttgacaaacctgacaaaaataagaaa
tggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtaga
aagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatggattaaa
gacttacatgttagacctaaaaccataaaaatcctagaagaaaacctaggcaataccatt
caggacataggcatgggcaaggacttcatgtccaaaacaccaaaagcaatggcaacaaaa
gccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaact
accatcagagtgaacaggcaacctacaaaatgggagaaaatttttgcaacctactcatct
gacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaacaca
accccatcaaaaagtgggcaaaggatatga

>gi568815575r:24329576_24529920|GENSCAN_predicted_peptide_2|1444_aa
MVVLSNRKDRKGKGEKEKSIACGELGKARSSEWPEKGPSITATLNQKFRRLLISCEGIFS
SSPISLQVSLSEEKKVRCNRPLTGSKPVNYQIQSDPGPSPVSVMTSKPSLDQKFAQTQLQ
TQICGALEPERELTMISSCSKRETAQWVWQKILFVDISINFVHNCLTGKNPNVLQLVNSG
IPVETDVYARCERYIYTVIGGLCFCMYAFKVKWQVVECKCGQQTRKCACRDVKPGPRRRP
LRYRCFQKPSNRLGSASLGAGFWAGRRDAKSGHDDDPSGALFSVTMDRDLEQALDRAENI
IEIAQQRPPRRRYSPRAGKTLQEKLYDIYVEECGKEPEDPQELRSNVNLLEKLVRRESLP
CLLVNLYPGNQGYSVMLQREDGSFAETIRLPYEERALLDYLDAEELPPALGDVLDKASVN
IFHSGCVIVEVRDYRQSSNMQPPGYQSRHILLRPTMQTLAHDVKMMTRDGQKWSQEDKLQ
LESQLILATAEPLCLDPSVAVACTANRLLYNKQKMNTDPMKRCLQRYSWPSVKPQQEQSD
CPPPPELRVSTSGQKEERKVGQPCELNIAKAGSCVDTWKGRPCDLAVPSEVDVEKLAKGY
QSVTAADPQLPVWPAQEVEDPFGFALEAGCQAWDTKPSIMQSFNDPLLCGKIRPRKKARQ
KSQKSPWQPFPDDHSACLRPGSETDAGRAVSQAQESVQSKVKGPGKMSHSSSGPASVSQL
SSWKTPEQPDPVWVQSSVSGKGEKHPPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSA
AAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVA
AAPAAAASAAPSHSQKPSVPLIQASRPCPAAQPPTKFIKIAPAIQLRTGSTGLKAINVEG
PVQGAQALGSSFKPVQAPGSGAPAPAGISGSDLQSSGGPLPDARPGAVQASSPAPLQFFL
NTPEGLRPLTLLQVPQGSAVLTGPQQQSHQLVSLQQLQQPTAAHPPQPGPQGSALGLSTQ
GQAFPAQQLLKVNPTRARSGLQPQPQPAVLSLLGSAQVPQQGVQLPSVLRQQQPQPQPPK
LQLQPQWQPKPRQEQPQSQQQQPQHIQLQTQQLRVLQQPQHIQLQTQQLRVLQQPVFLAT
GAVQIVQPHPVLNSHVWLVAIVWVSAVLEGQEQSRLWGQSIRHDLGLGHTGGVRFMMLIA
CSGLELLEILMAYGHLGQDLQDQVAPAMERGGWKRIFAGEEVKELKAQATGRIIYVDTKI
IKNSYCWHSVEEDDNESGPRIFKNTQVTVTEVNQVGLGGWALRISISKFPGVAAAAAGSG
TIHILRTCLDANHMVALQDPVWRVAASGLVQTMEDTSRSEIGRERQAYLFLQPTPCQAML
VSSFFPLCVRGNRLWVKSSLVIHPWCLRRFHKCIHIPYQGLAGQSNSRPLWGSDWHLTSD
GITI

>gi568815575r:24329576_24529920|GENSCAN_predicted_CDS_2|4335_bp
atggttgtcctgagtaacagaaaagatagaaaagggaaaggagaaaaagagaaaagcatt
gcttgcggcgagttggggaaggcaaggagctcagagtggccagagaaaggcccatccatt
acagcaacactgaatcaaaagttcaggcggctccttatcagttgtgaagggatcttttct
agcagtcctattagcctgcaagtttccctttccgaggaaaaaaaagtcagatgtaatagg
cctctaactggatccaaaccagttaattatcagatccaatccgatcccggacccagtcca
gtttctgtcatgacttccaaacccagtttggatcagaaatttgctcaaactcagctccaa
acacaaatctgtggagctttggaaccggagagagaacttaccatgatatccagctgctcc
aagagagaaacggcacaatgggtctggcagaaaatcttatttgtggatatttccatcaac
tttgttcataattgcctaactggaaagaatccaaatgtccttcaactggtaaacagcggc
attcctgtggaaactgatgtctatgcacggtgcgaaagatacatctataccgtcattggt
ggcttatgcttttgcatgtatgctttcaaggtgaaatggcaagtagtcgagtgcaagtgc
gggcagcagacccggaagtgcgcatgcagagacgtgaagcccgggccacgacgacgaccc
ctcaggtaccgatgttttcagaaaccctcaaacagattgggtagcgcttccctgggggca
ggtttctgggcaggccgcagagacgcgaagtccggccacgacgacgacccctcaggggcc
ctgttttctgttacaatggatcgagatttagaacaggctctggatcgcgcagagaatatc
attgaaattgcccaacagagacctcctagaaggagatactcacctagggcgggaaaaact
ctgcaggaaaaactttatgacatttatgttgaagaatgtggaaaagagcctgaggatcct
caggaattgagaagcaatgtaaacttgttagaaaagcttgttaggagagagtccttgcca
tgtttactggtcaatctatacccaggcaatcaggggtattctgtgatgctccagagagaa
gatgggtcctttgcagagaccattcggctgccttatgaagaaagggcattgctggactac
ttggatgcagaagaattaccccctgctttgggtgatgtcctggataaagcttcggttaac
atttttcatagtgggtgtgtcatagtagaagttcgtgactacaggcagtccagtaatatg
caacctcctggttaccaaagcaggcatattcttctacgtccaacgatgcagactttagcc
catgatgtgaagatgatgacaagagatggccagaaatggagccaggaagacaagcttcag
cttgagagccagctgatcttagcgacagctgaaccactgtgtcttgatccttctgtagca
gttgcctgcactgcaaacaggctgctgtacaacaagcaaaagatgaataccgacccgatg
aaacggtgcctccagaggtattcgtggccctctgtaaagccacagcaggagcagtctgac
tgtccacctcctcctgagctgagagtgtcgacttctggccaaaaagaagaaagaaaagta
ggtcagccttgtgagctgaacattgctaaagcaggaagttgtgtagacacgtggaaaggc
agaccctgtgatttggccgtgccttcagaagtggatgtggagaaacttgctaaagggtat
cagtccgtcacagctgctgacccacagctcccagtctggccagcccaggaggtagaagac
ccttttggatttgcgttggaagctggctgtcaggcctgggacaccaagccaagcatcatg
cagtcgtttaatgatccgcttctctgtggtaaaatacggccacgtaaaaaagccaggcag
aagagccagaagtctccctggcagcccttcccagatgaccattcagcttgtctcaggcct
gggtcagagactgatgctgggagggcagtgagtcaggcccaggaatcggtgcagagcaaa
gtcaaaggtccaggcaagatgtcacacagctccagtggcccagccagtgtcagtcagctc
tcttcatggaaaacaccagaacagcctgatcctgtgtgggtccagtcttcagtatcgggg
aagggagagaaacatccacctccccgcacccaacttccctcaagctcaggaaagatttcc
tcaggtaacagttttcccccacaacaggcaggcagccctcttaagcgtccattttctgct
gctgctgctattgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgct
gctgctcctgctcctgctctagctgctgctgctgctcctgctctagctgctgctgctgct
cctgctctagctgctgctgctgctcctgctcctgctcctgccgctgctcctgctgtagct
gctgctcctgctgctgctgcttctgcggcaccaagtcattctcagaagccctctgtgcct
ctcattcaagctagcaggccctgtccagctgcccagccccccaccaaattcataaaaata
gcgccagccattcagttgaggacaggctccactggcctaaaggccatcaatgtggagggc
ccagtccagggagcccaggctttggggagcagtttcaagcctgtgcaggcccctggctcg
ggtgcccccgctcctgcaggaatcagtggcagtgaccttcagtcctcaggaggtccacta
ccagatgcaaggcccggtgcagtgcaggcatcttctccagcaccccttcagtttttccta
aatactccggaaggtctcaggcctctgacactcctccaggttccgcagggctcggcggtt
ctgaccggcccgcagcagcagtcccatcagctggtttccctgcagcagctccagcagccc
acagctgctcatcctcctcagccagggccacagggttccgcactaggtttgagcacgcaa
gggcaggccttccctgctcagcaacttcttaaggtgaaccccactagagccagaagtggt
ctgcagccccagccccagcctgctgtgttgagtctgcttggctctgcccaggttcctcag
cagggtgtccagctcccctctgtcttgaggcagcagcagccacagccacagccgccgaag
ctgcaactgcaaccgcagtggcagccaaagccacggcaggagcagccacagtcgcagcag
cagcagccgcagcatatccagctccagactcagcagttgagagtcttgcagcagccgcag
catatccagctccagactcagcagttgagagtcctgcagcagccagtgtttttggcaaca
ggcgctgttcagatagtgcagccacatccagtgcttaatagccatgtatggctagtggct
attgtgtgggtcagcgcagttctagagggacaggagcaaagcagattatggggacagagc
atcaggcatgacctgggtttggggcacacaggtggagtgagatttatgatgctgattgca
tgtagtgggctggagcttcttgagatcctcatggcctatggtcatctgggccaggacctg
caggatcaagtcgccccagccatggagcgaggagggtggaaaaggatctttgcaggagag
gaggtcaaggagttgaaggcccaggctactggaaggattatctatgtggataccaaaatc
atcaagaattcatactgctggcatagtgttgaagaggatgataatgagtcaggccctaga
atcttcaagaatactcaggtaactgtaactgaagtcaaccaagtaggtctgggtgggtgg
gccctgagaattagcatttccaagtttccaggtgttgctgctgctgctgctggatcaggg
accatccacattttgagaacctgtctggatgcaaatcacatggtggccctccaggatcca
gtctggagagtagctgcttctggtttggtccagacaatggaggacaccagtagatctgag
ataggaagagagaggcaggcgtacttattcctgcagcccactccctgccaggctatgctg
gtcagcagcttttttcctctgtgtgtccgtggaaatcgactttgggttaagagtagtctg
gttatccatccgtggtgtttgcggaggtttcacaaatgcatacacatcccttatcaagga
cttgctggccagtcaaatagtagacctttgtgggggtcagactggcatctgacatcagat
ggcatcaccatctga

>gi568815575r:24329576_24529920|GENSCAN_predicted_peptide_3|201_aa
MTKKRRNNGRAKKGRGHVQPIRCTKCARCVPKDKAIKKFVIRNIVEAAAIRDISEASVFD
AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPMIWVQN
TADIRHVLTGFAAGKPPSLGRSCVGKSGSCPLSRCLQDGCPQVIPVGCINIRQKPPLLCN
HVGKCIIRSKLCGADLLAGIH

>gi568815575r:24329576_24529920|GENSCAN_predicted_CDS_3|606_bp
atgacaaagaaaagaaggaacaatggtcgtgccaaaaagggccgcggccacgtgcagcct
attcgctgcactaaatgtgcccgatgcgtgcccaaggacaaggccattaagaaattcgtc
attcgaaacatagtggaggccgcagcaatcagggacatttctgaagcgagcgtcttcgat
gcctatgtgcttcccaagctgtatgtgaagctacattactgtgtgagttgtgcaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccccacgtcccccaccaaagcccatgatctgggtccagaat
actgcagacatcagacatgtgttaactgggtttgctgccggcaagccaccatccttggga
aggagttgtgtgggcaaatcaggaagttgccctctcagcagatgtctccaggatggctgc
cctcaggttattcctgttggttgtataaatataagacagaagccaccactgctttgcaat
cacgtggggaagtgtatcatccgctccaagctctgtggagcagacctcctggccgggatc
cactga

>gi568815575r:24329576_24529920|GENSCAN_predicted_peptide_4|452_aa
MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGEYGAKGPHGPGAAAIRAATPDLRS
FGVKSVGTAGGAREYPGGSPGARISGRGGAGPGPLAPSLGLTRRHRNGVSLQDPHRRRDS
PNLRSLASNLLDTNLTALKTSERDVFEIRVVSGNRTLTAGSYPYRQGRDNACEKTSYMFL
RKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFL
QVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHT
LLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPD
KPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLG
GGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPL

>gi568815575r:24329576_24529920|GENSCAN_predicted_CDS_4|1356_bp
atgcggctgttccggtggctgctgaagcagccggtgcccaagcagatcgagcgctactcg
cgcttttcgccgtcgccgctctccatcaaacaattcctggacttcggtgagtacggggcc
aagggtccccatgggcccggggccgccgccattcgggctgccaccccggatctccgcagc
ttcggggtaaagtctgtgggaaccgcaggcggggctagggaatatccggggggctctcct
ggggctcggatttcggggcgcggaggggcagggcctggccccctcgcacccagcctggga
cttacccggagacacagaaacggcgtctcattgcaggaccctcatcgcaggcgagactcc
ccaaacctgcggtcgttagcttcaaatctgcttgacacaaacctcacagcccttaaaact
tcagaacgagatgtttttgaaataagggtggtttctgggaacagaacattaacagcaggc
agttatccctatcggcaagggagagataatgcatgtgagaaaacttcatatatgtttcta
cgaaaggaacttcctgtgcggctggctaacacaatgagagaagttaatcttctgccggat
aatttacttaaccgcccttcagtgggattggttcagagttggtatatgcagagttttctt
gaacttttagaatatgaaaataagagccctgaggatccacaggtcttggataactttcta
caagttctgattaaagtcagaaatagacacaatgatgtggttcctacaatggcacaagga
gtgattgaatacaaggagaagtttgggtttgatcctttcattagcactaacatccaatat
tttctggatcggttttataccaaccgcatctctttccgcatgcttattaatcagcacaca
cttctgtttgggggtgacactaatcctgttcatcctaaacacataggaagtatcgatccc
acctgtaacgtggcggatgtggtgaaagatgcatatgaaacagccaagatgctgtgtgaa
cagtattacctggtagctccagagctggaagttgaagaattcaatgccaaagcgccagac
aaacctattcaggtggtttatgtgccctcacatctgtttcatatgctatttgagttgttc
aagaactcaatgagagcgacagttgaactctatgaagacagaaaagagggctaccctgct
gttaaaaccctcgttactttgggtaaagaagacttatccattaagatcagtgacctaggt
ggtggtgtcccacttcgaaaaatagatcgtctttttaactacatgtattctactgctcct
agacccagcctggagcctaccagagctgcccctttg