GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:01:06

Sequence gi568815575r:23736745_23937320 : 200576 bp : 44.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  29191  29320  130  2  1   65   84    67 0.903   3.75
 1.02 Intr +  29736  29898  163  0  1   82  100    83 0.844   8.88
 1.03 Intr +  46569  46673  105  2  0   30   69    93 0.042   2.01
 1.04 Intr +  46914  46965   52  2  1  102   86    14 0.946   1.08
 1.05 Intr +  47056  47139   84  2  0  108   86    60 0.965   7.59
 1.06 Intr +  48584  48685  102  0  0   74   80   115 0.966   9.45
 1.07 Intr +  48776  48816   41  0  2  121   91    15 0.999   3.04
 1.08 Term +  48942  49112  171  2  0   94   55   125 0.988   7.63
 1.09 PlyA +  49152  49157    6                               1.05

 2.00 Prom +  59109  59148   40                              -1.86
 2.01 Init +  78325  78423   99  0  0   85   82    93 0.706   8.66
 2.02 Term +  80640  80666   27  2  0  102   43     4 0.315  -4.63
 2.03 PlyA +  80694  80699    6                               1.05

 3.02 PlyA -  81584  81579    6                               1.05
 3.01 Sngl - 100576  99998  579  1  0   75   44   523 0.999  42.78
 3.00 Prom - 103062 103023   40                              -4.26

 4.00 Prom + 108462 108501   40                              -5.26
 4.01 Init + 110341 110410   70  0  1   66   45    64 0.582   1.11
 4.02 Term + 112520 112704  185  0  2   62   39   137 0.960   3.91
 4.03 PlyA + 113394 113399    6                               1.05

 5.08 PlyA - 114996 114991    6                               1.05
 5.07 Term - 120860 120733  128  0  2   67   42    96 0.035   1.34
 5.06 Intr - 131944 131849   96  2  0   53   92    45 0.029   1.38
 5.05 Intr - 137713 137659   55  1  1   94   97   -20 0.017  -1.95
 5.04 Intr - 142290 142171  120  0  0   56   87    30 0.095   0.39
 5.03 Intr - 144208 144101  108  1  0   56   77   101 0.422   6.28
 5.02 Intr - 148093 148046   48  1  0  121   38    35 0.085   0.68
 5.01 Init - 170958 170950    9  0  0   67  100    12 0.040   0.11
 5.00 Prom - 176182 176143   40                              -1.76

 6.00 Prom + 178441 178480   40                              -4.16
 6.01 Init + 179205 179273   69  2  0   72   80     1 0.201  -1.09
 6.02 Intr + 190495 190626  132  0  0   98   80    73 0.663   8.34
 6.03 Intr + 198452 198681  230  1  2  115   66    65 0.010   3.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  46608  46673   66  2  0   81   69    76 0.885   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:23736745_23937320|GENSCAN_predicted_peptide_1|282_aa
XRKLCDQWCLCLSFDQARQTCSTDVAWQAVLSSCYQPGFHACRGPAIQWVLSSRPTSRKN
EVRGQLEGEQGGEEPYRVTEQLSGNLKWVAPFRRQVVPGPGPQREEKQKTKMAKFVIRPA
TAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGH
SIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLV
AEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE

>gi568815575r:23736745_23937320|GENSCAN_predicted_CDS_1|849_bp
nctagaaagctctgtgaccagtggtgcctttgcctgagttttgatcaggcccgccagact
tgttccactgacgtggcctggcaggctgtgctcagctcatgctaccagccaggattccac
gcctgccgaggtcccgccattcagtgggtcctgagttctcgtcccacatccaggaagaat
gaggtacgcggacaactagagggtgagcaaggcggagaggagccttatcgagtgacagaa
cagctctcgggaaacttgaagtgggtagctcctttccgcaggcaggttgtcccagggcct
ggtccgcaaagggaagaaaagcaaaagacgaaaatggctaaattcgtgatccgcccagcc
actgccgccgactgcagtgacatactgcggctgatcaaggagctggctaaatatgaatac
atggaagaacaagtaatcttaactgaaaaagatctgctagaagatggttttggagagcac
cccttttaccactgcctggttgcagaagtgccgaaagagcactggactccggaaggacac
agcattgttggttttgccatgtactattttacctatgacccgtggattggcaagttattg
tatcttgaggacttcttcgtgatgagtgattatagaggctttggcataggatcagaaatt
ctgaagaatctaagccaggttgcaatgaggtgtcgctgcagcagcatgcacttcttggta
gcagaatggaatgaaccatccatcaacttctataaaagaagaggtgcttctgatctgtcc
agtgaagagggttggagactgttcaagatcgacaaggagtacttgctaaaaatggcaaca
gaggagtga

>gi568815575r:23736745_23937320|GENSCAN_predicted_peptide_2|41_aa
MTRDNRVEGYDLTSEVMQYHFGCIQVIVGEVTKVNLSTVAK

>gi568815575r:23736745_23937320|GENSCAN_predicted_CDS_2|126_bp
atgacgagagacaaccgggtggaaggttatgacctaacctcagaagtcatgcagtatcac
tttggctgcatccaggtcattgtgggggaggtcactaaggtgaatctgtcaactgtggca
aagtag

>gi568815575r:23736745_23937320|GENSCAN_predicted_peptide_3|192_aa
MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW
WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE
KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY
VSEKGTVQQADE

>gi568815575r:23736745_23937320|GENSCAN_predicted_CDS_3|579_bp
atgaagactattctcagcaatcagactgtcgacattccagaaaatgtcgacattactctg
aagggacgcacagttatcgtgaagggccccagaggaaccctgcggagggacttcaatcac
atcaatgtagaactcagccttcttggaaagaaaaaaaagaggctccgggttgacaaatgg
tggggtaacagaaaggaactggctaccgttcggactatttgtagtcatgtacagaacatg
atcaagggtgttacactgggcttccgttacaagatgaggtctgtgtatgctcacttcccc
atcaacgttgttatccaggagaatgggtctcttgttgaaatccgaaattttttgggtgaa
aaatacatccgcagggttcggatgagaccaggtgttgcttgttcagtatctcaagcccag
aaagatgaattaatccttgaaggaaatgacattgagcttgtttcaaattcagcggctttg
attcagcaagccacaacagttaaaaacaaggatatcaggaaatttttggatggtatctat
gtctctgaaaaaggaactgttcagcaggctgatgaataa

>gi568815575r:23736745_23937320|GENSCAN_predicted_peptide_4|84_aa
MLNQGNVNENHDGKFWEHLHMLDNSMGLGIEHLQLLKPIKTKQKPDLCAYVDLEHCQKDQ
TGSGSSSPCIQLPMCREYREHVKL

>gi568815575r:23736745_23937320|GENSCAN_predicted_CDS_4|255_bp
atgctcaatcagggcaatgtaaatgaaaaccacgatgggaaattctgggaacatcttcac
atgctagataattcaatgggtctaggcattgagcatctacagctgctaaaaccaataaaa
acaaagcaaaaaccagacttatgtgcctacgtggatctagagcattgccaaaaggatcaa
acaggatctggttcaagtagcccgtgcatccagctgccaatgtgcagggagtacagagaa
cacgttaaactatag

>gi568815575r:23736745_23937320|GENSCAN_predicted_peptide_5|187_aa
MFKECCVTTQLEKPIGNPKVIQRSVGPASLSLLTFKVYAAPKKDSPPKNSVKVDELSLYS
VPEGQSKYVEEARSQLEESISQLRHYCEPYTTWCQETYSQTKPKMQSLVQWGLDSYDYLQ
NAPPGFFPRLGVIGFAGLIGLLLARVLNPDSLIGLQLYVRVQWPQLGELDGFDDKYQYFP
AFAQHCL

>gi568815575r:23736745_23937320|GENSCAN_predicted_CDS_5|564_bp
atgttcaaggaatgctgtgtcaccacccaactagaaaaacccatcggaaaccccaaggta
attcagaggtccgtggggccagccagcctgagcttgctcaccttcaaagtctatgcagca
ccaaaaaaggactcacctcccaaaaattccgtgaaggttgatgagctttcactctactca
gttcctgagggtcaatcgaagtatgtggaggaggcaaggagccagcttgaagaaagcatc
tcacagctccgacactattgcgagccatacacaacctggtgtcaggaaacgtactcccaa
actaagcccaagatgcaaagtttggttcaatgggggttagacagctatgactatctccaa
aatgcacctcctggattttttccgagacttggtgttattggttttgctggccttattgga
ctccttttggctagagtattgaatccagattccttgattgggctacagttgtatgtgaga
gtccagtggccccagcttggggagcttgatggctttgatgacaaataccagtactttcca
gcatttgctcaacattgtttgtaa

>gi568815575r:23736745_23937320|GENSCAN_predicted_peptide_6|144_aa
MTLWLKVAMRVALISHSVFSLTQAVDDACKLMGERKFHRIIMEDERIFPKSKVTDIMDVV
TMQDYVQYRSFFDEAPAFSGGRNNSWRKLNLENIPRTMLMYDIVHYSESGVISNRLRNEM
KFLLQRPVTQEIHKHQLRIVSEIS

>gi568815575r:23736745_23937320|GENSCAN_predicted_CDS_6|432_bp
atgactctgtggctaaaagttgccatgagagtagctctcatctcccattctgtattcagt
cttacacaggcagtggatgatgcttgcaaactaatgggggaaaggaaatttcaccgtata
attatggaagatgaacgtattttcccgaagtccaaagtaactgatataatggatgttgtc
accatgcaagattatgtacaatatcgcagttttttcgatgaggcccctgcattttctggc
ggcagaaataacagctggcgcaaattaaatcttgaaaatattcccaggacaatgctaatg
tatgacatagttcattattcagagtctggagtgatctcaaaccgtctacgaaatgaaatg
aagtttctgttacagagaccagtaacgcaagagatccataagcaccagctacggattgtt
tctgaaattagn