GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:35:42

Sequence gi568815575r:115618945_115819229 : 200285 bp : 43.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3302   3465  164  0  2   61   92   178 0.992  15.19
 1.02 Intr +  10254  10383  130  2  1   26   89   109 0.935   5.07
 1.03 Intr +  10891  11023  133  2  1   27   91    94 0.957   3.30
 1.04 Intr +  15056  15137   82  2  1   68   85   107 0.832   8.04
 1.05 Intr +  17892  17915   24  2  0  103   81    23 0.365   1.32
 1.06 Intr +  21464  21559   96  1  0   94  101    12 0.907   3.31
 1.07 Intr +  24369  24564  196  2  1   79   88    95 0.913   7.59
 1.08 Intr +  26077  26138   62  2  2   58   49    53 0.575  -3.15
 1.09 Intr +  27159  27242   84  2  0   39   71    87 0.491   2.12
 1.10 Intr +  27458  27591  134  1  2   95   75    86 0.998   7.44
 1.11 Intr +  28606  28729  124  1  1   77   77   157 0.997  14.09
 1.12 Term +  28949  29077  129  1  0   68   49   149 0.799   7.18
 1.13 PlyA +  29207  29212    6                               1.05

 2.00 Prom +  30193  30232   40                              -5.06
 2.01 Init +  41464  41526   63  0  0   62   62    60 0.699   1.95
 2.02 Intr +  45879  46285  407  2  2   71  108   627 0.614  56.15
 2.03 Intr +  46389  46564  176  0  2  -14   20   223 0.670   4.88
 2.04 Term +  46640  46884  245  0  2  -17   48   426 0.926  24.16
 2.05 PlyA +  47536  47541    6                               1.05

 3.02 PlyA -  47848  47843    6                               1.05
 3.01 Sngl -  51476  50994  483  2  0   82   54   231 0.568  15.18
 3.00 Prom -  66099  66060   40                              -1.86

 4.00 Prom +  81152  81191   40                              -1.86
 4.01 Init +  81930  81977   48  2  0   49   99    40 0.135   0.25
 4.02 Intr +  83936  84750  815  1  2   17   17   724 0.092  48.44
 4.03 Term +  84939  85176  238  0  1   -5   47   218 0.543   4.04
 4.04 PlyA +  85746  85751    6                               1.05

 5.02 PlyA -  90185  90180    6                               1.05
 5.01 Sngl - 100480  99998  483  1  0   51   48   387 0.956  26.48
 5.00 Prom - 101186 101147   40                              -6.36

 6.00 Prom + 106144 106183   40                              -6.06
 6.01 Init + 106201 106248   48  0  0   64   72    27 0.468  -0.35
 6.02 Intr + 107855 108042  188  1  2   93  100    46 0.625   4.79
 6.03 Term + 109127 109448  322  2  1   97   37   210 0.849  11.09
 6.04 PlyA + 111293 111298    6                               1.05

 7.04 PlyA - 113326 113321    6                              -0.45
 7.03 Term - 113911 113590  322  0  1   97   37   200 0.714  10.09
 7.02 Intr - 115190 115003  188  2  2   93  100    46 0.576   4.79
 7.01 Init - 118435 118253  183  1  0   96   31    78 0.078   2.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  49524  49433   92  1  2  123   35    74 0.857   3.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:115618945_115819229|GENSCAN_predicted_peptide_1|452_aa
XLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRNKDGKISFDEFVYIFQEV
KSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYSEEEKYAFVNWINKALENDPDCR
HVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQPWLLYSEMDS
KAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVV
SGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSLGVNPHLYER
IKVPVDWSKVNKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTL
ALVWQLMRRYTLNVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAV
VDLIDAIQPGCINYDLVKSGNLTEDDKHNNAK

>gi568815575r:115618945_115819229|GENSCAN_predicted_CDS_1|1359_bp
natctcaacagcaacggattcatttgtgactatgaacttcatgagctcttcaaggaagct
aatatgccattaccaggatataaagtgagagaaattattcagaaactcatgctggatggt
gacaggaataaagatgggaaaataagttttgacgaatttgtttatatttttcaagaggta
aaaagtagtgatattgccaagaccttccgcaaagcaatcaacaggaaagaaggtatttgt
gctctgggtggaacttcagagttgtccagcgaaggaacacagcattcttactcagaggaa
gaaaaatatgcttttgttaactggataaacaaagctttggaaaatgatcctgattgtaga
catgttataccaatgaaccctaacaccgatgacctgttcaaagctgttggtgatggaatt
gtgctttgtaaaatgattaacctttcagttcctgataccattgatgaaagagcaatcaac
aagaagaaacttacacccttcatcattcagccttggctgctttactccgagatggattcc
aaagcctatttccatcttctcaatcaaatcgcaccaaaaggacaaaaggaaggtgaacca
cggatagatattaacatgtcaggtttcaatgaaacagatgatttgaagagagctgagagt
atgcttcaacaagcagataaattaggttgcagacagtttgttacccctgctgatgttgtc
agtggaaaccccaaactcaacttagctttcgtggctaacctgtttaataaatacccagca
ctaactaagccagagaaccaggatattgactggactctattagaaggagaaactcgtgaa
gaaagaaccttccgtaactggatgaactctcttggtgtcaatcctcacttatatgaacga
attaaagttcctgttgactggagtaaggttaataaacctccatacccgaaactgggagcc
aacatgaaaaagctagaaaactgcaactatgctgttgaattagggaagcatcctgctaaa
ttctccctggttggcattggagggcaagacctgaatgatgggaaccaaaccctgacttta
gctttagtctggcagctgatgagaagatataccctcaatgtcctggaagatcttggagat
ggtcagaaagccaatgacgacatcattgtgaactgggtgaacagaacgttgagtgaagct
ggaaaatcaacttccattcagagttttaaggacaagacgatcagctccagtttggcagtt
gtggatttaattgatgccatccagccaggctgtataaactatgaccttgtgaagagtggc
aatctaacagaagatgacaagcacaataatgccaagtaa

>gi568815575r:115618945_115819229|GENSCAN_predicted_peptide_2|296_aa
MPSEKRVLAAALVEVVLEKTLAQVVHCTVKTDSRCRELVPPIPDAMSSKGSVVLAYSGGL
DTSCILVLLKEQGYDIIAYVANTGQKEDFEEARKKALKLGGKKVFIEEVSKEFVKEFIWL
AIQSSALYEDHYLLGTSLTRPCIARKQVEIAQQERAKMPKFYNRFKVRNDLMEHTKQHGI
PIPVTPKNLWNMDENLMQISNEAGILENPKNQAFPGVPMKVTNVKDGTTHQTSLELFLYL
NEDVGKYSLGRIDIKENHFTGMKSPGIYETPADTIVYHAHLDIRAFTMDREVCKIK

>gi568815575r:115618945_115819229|GENSCAN_predicted_CDS_2|891_bp
atgcccagtgaaaaacgtgttcttgcagcagctcttgtggaagttgtccttgaaaaaact
ttggcccaagtggttcactgcactgttaagacagattccagatgccgggaactcgtgcct
ccaattccagatgctatgtccagcaaaggctctgtggttctggcctacagtggcggcctg
gacacctcctgcatcctcgtgttactgaaggaacaaggctatgacatcattgcctacgtg
gccaacactggccagaaggaagactttgaggaagccaggaagaaggcactgaagcttggg
ggcaaaaaggtgttcattgaggaagtcagcaaggagtttgtgaaggagttcatctggctg
gccatccagtccagcgcactgtatgaggaccactacctcctgggcacctctctcaccagg
ccctgcatcgcccgaaaacaagtggaaatcgcccagcaggagagggccaagatgcccaag
ttctacaacaggttcaaggtccgaaatgaccttatggaacacacaaagcaacacgggatt
cccatcccagtcactcccaagaacctgtggaacatggacgagaacctcatgcagatcagc
aatgaggctggaatcttggagaaccctaagaaccaagcatttccaggagtccccatgaaa
gtgaccaacgtcaaggatggcaccacccaccagacctccttggagctcttcctgtacctg
aacgaagacgtgggcaagtacagcttgggccgtattgacatcaaggagaaccacttcact
ggaatgaagtccccaggtatctatgagaccccagcagacaccatcgtttaccatgctcat
ttagacatcagggccttcaccatggaccgggaagtatgcaaaatcaaataa

>gi568815575r:115618945_115819229|GENSCAN_predicted_peptide_3|160_aa
MKDLFKENYKPLLKEIKEDTIKWKNIPCSWVRRINIMKVAILPKVIDRFNAIPIKLPMTF
FTELEKTTLKFIWNQKRALITKSFLSQKNKAGGITLPDFKLHYKATVTKTAWYWYQNRDI
DQWNRIEPSEITPHIYNYLIFDKPEKSKQWGKDSLFNKWC

>gi568815575r:115618945_115819229|GENSCAN_predicted_CDS_3|483_bp
atgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggataca
atcaaatggaagaacattccatgctcatgggtaagaagaatcaatatcatgaaagtggcc
atactgcccaaggtaattgatagattcaatgccatccccatcaagctaccaatgactttc
ttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagccctcatc
accaagtcattcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaa
ctacactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatata
gatcaatggaacagaatagagccttcagaaataacgccgcatatctacaactatctgatc
tttgacaaacctgagaaaagcaagcaatggggaaaggattccctatttaataaatggtgc
tga

>gi568815575r:115618945_115819229|GENSCAN_predicted_peptide_4|366_aa
MSKPGMVAHAYNLSTLHRGAHVRVLSAPPHFHFGQTNRTPKFLRRFPAGKVPAFEGDDRF
CVFESNAIAYYVSNEELQGSTPEAAAQVMQWVSFADSNIVSPASTWVFPTLGIMRHNKQA
TENTKEEVRQILGLLDAHLKTRTFLEGERVTLTDITVVCTLLWLYKQVLEPSFCQAFPNT
NRWFLTCINQPQFCTVLGKAKLCEKMAQSDAKKFVESQPKKDTPRKEKRSREEKQKPQAE
QEEKKAAAPTPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDELKLNVILFGTNNISSI
SGVWVFRGQELAFPLSPDWQVGYESYTWQKLDPGSEETQMLVREYFSWEGAFQHVGKPFN
QGKIFK

>gi568815575r:115618945_115819229|GENSCAN_predicted_CDS_4|1101_bp
atgtccaagccgggcatggtggctcacgcctataatctcagcactttgcacagaggggct
catgtccgtgtgctctccgcaccaccccatttccactttggccaaaccaaccgcacccct
aaatttctccgcagatttcctgctggcaaggttccagcatttgaaggtgacgatagattc
tgtgtgtttgagagcaatgccattgcctactatgtgagcaatgaggagctgcagggaagt
actccagaggcagcagcccaagtgatgcagtgggtgagctttgctgatagcaatatagtg
tccccagccagtacctgggtgttccccaccttgggcatcatgcgtcacaacaaacaggcc
actgagaatacaaaggaggaagtgaggcaaattctggggctgttggatgctcacttgaag
acaaggacttttctggagggcgaacgagtgacattgactgacatcacagttgtctgtacc
ctattgtggctctataagcaggtcctagaaccttctttctgccaggcctttcccaatacc
aaccgctggttcctcacctgcattaaccagcctcagttctgcactgtcttggggaaagca
aaactatgtgagaagatggcccagtctgatgctaaaaagtttgtggaaagccagcctaaa
aaggacacaccacggaaagagaagcgttcacgggaagagaagcagaagccccaggctgag
caggaggagaaaaaggcggctgcccctactcctgaggaggagatggatgaatgtgagcag
gcgctggccgctgagcccaaggccaaggacccctttgctcacctgcccaagagtaccttt
gtgttggatgaattgaagctcaatgtcatcctctttggaaccaacaatatcagctccatt
tctggagtctgggtcttccgaggccaggagcttgcctttccactgagtccagattggcag
gtgggctatgagtcatacacatggcagaaactggatcctggcagcgaggagacccagatg
ctggttcgagagtacttttcctgggagggggccttccagcatgtgggcaaacccttcaat
cagggcaagatcttcaagtga

>gi568815575r:115618945_115819229|GENSCAN_predicted_peptide_5|160_aa
MGGSGGSCSRTQGGGRERTTCAHPLPWSIAAASFFCSSWCCLCARLVRTWYLFCETAAEE
IPALAMADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSV
RQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY

>gi568815575r:115618945_115819229|GENSCAN_predicted_CDS_5|483_bp
atgggaggctccggcggctcgtgctcgcgcacgcagggtggaggcagggagcgcacgacg
tgcgcgcaccctctgccctggtccatcgctgccgcctccttcttctgcagctcctggtgc
tgcttgtgtgctcgtttggtgcggacctggtacctcttttgtgaaacggcagctgaggag
attccggcgcttgccatggccgacgaaaaacccaaggaaggagtcaagactgagaacaac
gatcatattaatttgaaggtggcggggcaggatggttctgtggtgcagtttaagattaag
aggcatacaccacttagtaaactaatgaaagcctattgtgaacgacagggattgtcagtg
aggcagatcagattccgattcgacgggcaaccaatcaatgaaacagacacacctgcacag
ttggaaatggaggatgaagatacaattgatgtgttccaacagcagacgggaggtgtctac
tga

>gi568815575r:115618945_115819229|GENSCAN_predicted_peptide_6|185_aa
MLRHGEQKRKRARKKWDFLPTCAFKTVRAATERVRHGADRLRGGGRDAHELKYPDTPSTS
TTTSNTAPTGPLSRSPKPRTQGGTPRRAASSGGHRPNGHGTQHWQSALLTPQACSVADGA
SRAEDPARPSPRLLPREGAPGKLPKAPSPGSLAEASAGPAQIMAATRLPSHGFLSGNGPA
SWLSS

>gi568815575r:115618945_115819229|GENSCAN_predicted_CDS_6|558_bp
atgttgagacatggagagcagaaaaggaagcgagcccggaagaagtgggacttcttgccc
acgtgcgccttcaaaacggtaagagctgcaactgaacgtgtgagacatggtgcagatagg
ctgagaggcggcgggagagatgcccatgaactcaagtacccggacacgccctccacttct
accaccacgagtaacaccgcccccacgggaccgctctcgaggtcccccaagccaaggacg
caaggaggaacgccccggcgcgcggccagcagcggcgggcaccggcccaatggccacgga
actcagcactggcagtcggccctcctcacaccgcaggcgtgcagtgtggccgacggagcc
tcccgggccgaggacccagctaggccgtcaccccggttgctcccacgggaaggggcacca
ggcaaactgcccaaggccccgagcccaggctccctggcggaggcctccgctggtcccgcc
cagatcatggccgccaccaggctcccgagccatggcttcctgtccgggaacggcccggcg
tcctggctgtccagctag

>gi568815575r:115618945_115819229|GENSCAN_predicted_peptide_7|230_aa
MAREPGGGHDLGGTSGASAREPGLGALGSLPGAPSRGSNRGDGLAGSSAREAPSATLHAC
GDFLPTCAFKTVRAATERVRHGADRLRGGGRDAHELKYPDTPSTSTTTSNTAPTGPLSRS
PKPRTQGGTPRRRPAAAGTRANGHGTQHWQSALLTPQACSVADGASRAEDPARPSPRLLP
REGAPGKLPKAPSPGSLAEASAGPAQIMAATRLPSRGFLSGNGPASWLSS

>gi568815575r:115618945_115819229|GENSCAN_predicted_CDS_7|693_bp
atggctcgggagcctggtggcggccatgatctgggcgggaccagcggagcctccgccagg
gagcctgggctcggggccttgggcagtttgcctggtgccccttcccgtgggagcaaccgg
ggtgacggcctagctgggtcctcggcccgggaggctccgtcggccacactgcacgcctgc
ggtgacttcttgcccacgtgcgccttcaaaacggtaagagctgcaactgaacgtgtgaga
catggtgcagataggctgagaggcggcgggagagatgcccatgaactcaagtacccggac
acgccctccacttctaccaccacgagtaacaccgcccccacgggaccgctctcgaggtcc
cccaagccaaggacgcaaggaggaacgccccggcgccggccagcagcggcgggcacccgc
gccaatggccacggaactcagcactggcagtcggccctcctcacaccgcaggcgtgcagt
gtggccgacggagcctcccgggccgaggacccagctaggccgtcaccccggttgctccca
cgggaaggggcaccaggcaaactgcccaaggccccgagcccaggctccctggcggaggcc
tccgctggtcccgcccagatcatggccgccaccaggctcccgagccgtggcttcctgtcc
gggaacggcccggcgtcctggctgtccagctag