GENSCAN 1.0	Date run:  4-Nov-116	Time: 00:14:42

Sequence gi568815575f:8365451_8566380 : 200930 bp : 38.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   9245   9164   82  1  1   37  105    88 0.054   4.12
 1.01 Init -  19938  19910   29  0  2   79   80    62 0.058   2.43
 1.00 Prom -  28680  28641   40                              -1.85

 2.00 Prom +  35900  35939   40                              -3.65
 2.01 Sngl +  48740  48922  183  1  0   99   42   132 0.708   4.49
 2.02 PlyA +  49994  49999    6                               1.05

 3.03 PlyA -  50516  50511    6                               1.05
 3.02 Term -  51581  51427  155  0  2   31   46   167 0.323   3.90
 3.01 Init -  61130  61082   49  2  1   97   87    20 0.425   3.96
 3.00 Prom -  67223  67184   40                              -4.55

 4.00 Prom +  85371  85410   40                              -5.85
 4.01 Init +  86290  86374   85  0  1  100  101   117 0.789  15.23
 4.02 Intr +  86955  87207  253  1  1   63   89   127 0.135   5.87
 4.03 Term +  90871  90883   13  1  1  130   40     4 0.041  -3.50
 4.04 PlyA +  91262  91267    6                               1.05

 5.02 PlyA -  91343  91338    6                               1.05
 5.01 Sngl -  93432  93022  411  0  0   50   33   214 0.743   8.14
 5.00 Prom -  99149  99110   40                              -5.65

 6.00 Prom +  99190  99229   40                             -10.15
 6.01 Sngl + 100001 100933  933  1  0   66   42   882 0.924  77.60
 6.02 PlyA + 101035 101040    6                               1.05

 7.06 PlyA - 102322 102317    6                               1.05
 7.05 Term - 120279 120092  188  1  2   35   42   147 0.118   1.47
 7.04 Intr - 128280 128175  106  0  1   53   91    72 0.131   2.87
 7.03 Intr - 132902 132755  148  1  1   61   60    77 0.084   1.52
 7.02 Intr - 135638 135482  157  0  1   66   85   106 0.313   6.25
 7.01 Init - 138931 138832  100  1  1   52  121    26 0.203   2.78
 7.00 Prom - 143538 143499   40                              -3.25

 8.11 PlyA - 144188 144183    6                               1.05
 8.10 Term - 154762 154548  215  2  2  119   35   181 0.925  12.31
 8.09 Intr - 157234 157158   77  0  2   68   64    27 0.193  -3.46
 8.08 Intr - 161596 161496  101  1  2   53   98    37 0.138  -0.81
 8.07 Intr - 167512 167375  138  1  0   17   52   155 0.235   4.54
 8.06 Intr - 167807 167668  140  0  2   58   86    50 0.586   1.06
 8.05 Intr - 169010 168869  142  2  1   88   79    58 0.965   3.91
 8.04 Intr - 170361 170141  221  1  2   85   44   145 0.522   6.90
 8.03 Intr - 171492 171321  172  0  1   91   98    41 0.906   3.99
 8.02 Intr - 174308 174214   95  0  2   54   85    90 0.578   4.06
 8.01 Init - 181931 181865   67  2  1   82   77    49 0.781   4.49
 8.00 Prom - 187953 187914   40                              -5.35

 9.00 Prom + 189234 189273   40                              -5.95
 9.01 Sngl + 189558 190622 1065  2  0   45   48   408 0.689  29.38
 9.02 PlyA + 190666 190671    6                               1.05

10.02 PlyA - 192435 192430    6                               1.05
10.01 Term - 200762 200562  201  2  0   43   55   253 0.699  13.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_1|37_aa
MPVQKAALLSPRNAMHALLMISAQFSVKTTDEHIDTK

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_1|111_bp
atgcccgtgcagaaggcagctctgctcagtcctagaaatgctatgcatgctttgctgatg
atctcagcacagttctcagtgaagacaacagacgaacacattgacaccaag

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_2|60_aa
MECPVRALVLVQKKDSMSYMLECPGPQRRIGRISSLCHEYCQGSTQTCMEQERGDIDQHY

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_2|183_bp
atggagtgcccggtaagagccttggtcttggtgcagaagaaagacagcatgtcatacatg
cttgagtgtccaggtccccagaggaggattgggagaataagctccctgtgccatgaatat
tgccaggggtccacacagacctgcatggagcaagaacgaggagacattgaccaacactat
tga

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_3|67_aa
MTLEFRKAAPGNQHQKKGEETPALSLYHVRMWLPEASKRAFTRISTLLDLDPKLPILQYC
EKRNSVA

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_3|204_bp
atgaccttggagttcagaaaggctgctccagggaatcaacaccagaaaaaaggggaagag
acaccagcactctctctctaccatgttagaatgtggctgcctgaagccagcaagagagcc
tttaccagaatctccacgttgctagaccttgatcctaaacttcccatcctccagtactgt
gagaaacggaattctgttgcttaa

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_4|116_aa
MANMEKPCVRNWRVLGLTDFKNEATDPGDSGAQLASPSGSRTGAAGGAACQSRAVRSHSS
ALGWSMGLGAVEQGVVLVGEARAAQEPMEWVGGSGKSGCRSRALPRRKAAKGRCNY

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_4|351_bp
atggccaatatggagaaaccctgtgtccggaattggcgggttctgggtctcactgacttc
aagaatgaagccacggaccctggcgactcaggagcccagctagcttcacccagtggatcc
cgcaccggggctgcaggtggagctgcctgccagtcccgcgccgtgcgttcccattcctca
gcgcttgggtggtcgatgggactgggcgccgtggagcagggggtggtgctcgttggggag
gctcgggccgcacaggagcccatggagtgggtgggaggctcaggcaagtcgggctgcagg
tcccgagccctgccccgcaggaaggcagctaagggtcggtgtaactactaa

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_5|136_aa
MWGQSPTGVLPGRAVTRGPQTFRHQNGRSTDSLHCVPGKAADTQCQPMKAARREAVPCNA
TGAELPKTMGTHLLHQHDLDVRPGVKEDHFGALKFDGTAAFWTCMGPATPLFWPISPIWN
SCIYPILVPSLHLGSY

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_5|411_bp
atgtggggtcagagccctactggggtactgccaggtagagctgtgacaagagggccacag
accttcagacaccagaatggtagatcaactgacagcttgcactgtgtacctggaaaagct
gcagacactcaatgccagcccatgaaagcagctaggagggaggctgtaccctgcaatgcc
acaggggcagagctgcctaagaccatgggaacccacctcttgcatcagcatgacctggat
gtgagacctggagtcaaagaagatcattttggagctttaaaatttgatggcactgctgca
ttttggacttgcatgggccctgcaacccctttgttttggccaatttctcccatttggaac
agctgtatttacccaatacttgtaccctcattgcatctaggaagttactag

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_6|310_aa
MSPKPRASGPPAKAKEAGKRKSSSQPSPSDPKKKVSDPPKLLLVFPSPPSSQEASPVVTW
HNPPTRPPPLLRTRPCSQPPPSSSLNRSPSVISLLSFQTTKVAKKGKAVRRGRRGKKGAA
TKMAAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ
ESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESEVEEPLSQ
ESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPLSQESEMEEPLSQ
ESEMEELPSV

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_6|933_bp
atgagtccaaagccgagagcctcgggacctccggccaaggccaaggaggcaggaaagagg
aagtcctcctctcagccgagccccagtgacccgaagaagaaggtgagtgaccctcccaag
ctcctcctcgtcttcccctcgcctccttcctcacaagaagcctctcctgtcgtcacttgg
cacaaccccccaacccggcccccaccgcttctgaggacacgtccctgttcccagcctcct
ccatcctcgtccctaaaccggagcccttctgtgatctccctgttgtccttccagactacc
aaggtggccaagaagggaaaagcagttcgtagagggagacgcgggaagaaaggggctgcg
acaaagatggcggccgtgacggcacctgaggcggagagcgggccagcggcacccggcccc
agcgaccagcccagccaggagctccctcagcacgagctgccgccggaggagccagtgagc
gaggggacccagcacgaccccctgagtcaggagagcgagctggaggaaccactgagtcag
gagagcgaggtggaagaaccactgagtcaggagagccaggtggaggaaccactgagtcag
gagagcgaggtggaagaaccactgagtcaggagagccaggtggaggaaccactgagtcag
gagagcgaggtggaggaaccactgagtcaggagagcgaggtggaagaaccactgagtcag
gagagccaggtggaggaaccactgagtcaggagagcgaggtggaagaaccactgagtcag
gagagccaggtggaggaaccactgagtcaggagagcgagatggaagaaccactgagtcag
gagagccaggtggaggaaccactgagtcaggagagcgagatggaagaaccactgagtcag
gagagcgagatggaagaactaccgagtgtgtag

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_7|232_aa
MHPLASLSWPHGRLGVGTREIRKGYILLTEHQQGPFLATRFSSGKAQSIQDMPGDNASYI
GLQQWLKGVGDQQLQLPLVLGMRMLSLPAPRMMHPCRIVALQCCPLQQGAAFASCHGGTG
LGERIWIGQWELSDGVTETADRETVDKATAVMHSLYFISECEQLQKTTWPENELSTVCGP
HRDDTNGFFNGKLIAIIPCSIHYLLLTAAHVSILCQVQWKPASTQIRFSCDT

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_7|699_bp
atgcaccctcttgcttctctgtcgtggccccatggtcgtctaggtgtgggaacgagggaa
ataagaaagggttacattttgcttactgaacaccagcaagggcctttcctggctaccagg
ttcagctccggcaaagcacaaagcatacaggacatgccaggagacaatgcctcctacatt
ggcctccagcaatggctgaagggtgttggtgaccagcagctccagctccctcttgttttg
ggaatgagaatgctgagccttcctgctccaagaatgatgcacccatgcaggatagtggct
ctgcaatgctgtccactgcagcagggagccgcctttgcttcctgccatggtggtactggg
cttggtgagaggatttggattggccagtgggaattgagtgatggcgtaactgaaactgca
gacagagaaactgtggataaggcgactgctgtaatgcattcactatacttcatctctgaa
tgtgagcaactccagaaaactacttggccagaaaatgaactcagtacagtgtgtggccct
cacagagatgacacaaatggcttcttcaatgggaagctcatcgccatcatcccctgctcc
atccattatttgttactgacagctgcccatgtgtcaatcttatgtcaagtacagtggaag
ccagcttcaacacaaatccgcttttcatgtgacacctga

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_8|455_aa
MNTSGPGHEEVQLGERSGMSSIDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIIL
QDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPVGCLGEAGHVLSKVLA
KPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQS
QILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKTFRTPELPPSSAHIWEDIKEE
EKNRKRRERVWLYIQIQNRKDMVIGRNICQGLVLFLQIKMCKLVELRPRDMHTSRGSGNC
SEARTLLCDFSAGRTSVNHGRIWRQIREAGATDPEIGLEGCNKNPTSFTFFYFLSYTTGS
QSYAMGFIMNNRKHLTFLRRVVHLGAVLSFGQMSAFSSKAQSQNISFIQLLTTTAPMPSE
EDTEESHREWILSPAKVLGISQRPKATPLCNMRTA

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_8|1368_bp
atgaacacttctggcccaggacatgaagaggtgcagctgggagaaagatcgggaatgtca
agtattgatcccactgtcaaccgatatcatgtgcggtggtttcctgaagcgtgtgcccac
aacagaacaaccggatcagaggcatcatctggcatgacccacgaaaattacataattctt
caagatctgtcattttcctgcaagtataaggtgactgtccaaccaatacggccaaaaagt
cactccaaggcagaagctgttttcttcactactccaccatgctctgctcttaaggggaag
agccacaagcctgttggctgcctgggcgaagcaggtcatgttctttctaaggtgctagct
aagcctgagaacctttctgcttcattcatcgtccaggatgtgaacatcaccggtcacttt
tcttggaagatggccaaggccaatctctatcagcccatgactgggtttcaagtgacttgg
gctgaggtcactacggaaagcagacagaacagcctacccaacagcattatttcacagtcc
cagatcctgccttccgatcattatgtcctaacagtgcccaatctgagaccatctactctt
taccgactggaagtgcaagtgctgaccccaggaggggaggggccggccaccatcaagacg
ttccggacgccggagctcccaccctcttcagcacacatttgggaagacatcaaagaggaa
gagaaaaacaggaaaaggagagaaagagtgtggttgtacattcagattcagaataggaaa
gacatggtcataggaaggaacatttgccagggtctcgtgctttttctacaaataaagatg
tgtaagcttgttgaacttcggccacgagacatgcacacttccagaggcagtgggaactgc
tcagaggcccggactctcctatgtgactttagtgcaggaagaacttctgtcaatcatgga
cgcatctggagacaaatcagagaggctggggctactgacccagagatcgggcttgaaggc
tgcaataagaatccaacttccttcacattcttttacttcttgagctacaccacaggcagc
caatcatatgcaatgggcttcattatgaataataggaagcatcttacattccttcgtagg
gtggtccacctcggtgctgtattgtcatttggacagatgtcagctttctctagcaaggcc
caaagccaaaacatcagcttcattcagttgctgacaaccacagcacctatgccaagtgaa
gaagacaccgaggagtcgcatagggagtggattctgagtcctgccaaggtgcttggcatc
tcacagaggccaaaagcaaccccactgtgtaacatgagaacagcttaa

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_9|354_aa
MEIITNSLSDHSAIKLELRIKKATQNHTTTWKLNNMLLNDYWVNNEIQAEINKFFETNEN
KDTMYQNHWDTAKAAFRGKFIARNAHRRKRGRSKIDTLTSQLKELEKQEQTNSKASRRQE
ITKIRGELKEIETQKTLPKINESRSWFFENINKTDRLLARLIKKKREKNQIDTILNDKGD
ITNDPTEVQTTIREYYKHLYANKLENLEEMDKLLDTYTLPRLNQEEVESLNNSLPTKKSP
GPDRFTAELYQRYKQELVSFLLKLFQTIEKEGLLPNSFYEVSIMLIPKPGRDTTKKENFR
PISLMNIDVKILNKILANRIQQHIRKFIHHDQVGFIPGMQGWFNIHNPSHKQNQ

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_9|1065_bp
atggaaatcataacaaacagtctctcagaccacagtgcaatcaaattagaactcaggatt
aagaaagccactcaaaaccatacaactacatggaaactgaacaatatgctcctgaatgac
tactgggtaaataatgaaattcaggcagaaataaataagttttttgaaaccaatgagaac
aaagacacaatgtaccagaatcactgggacacagctaaagcagcgtttagagggaaattt
atagcacgaaatgcccacaggagaaagcggggaagatctaaaatcgacaccctaacatca
caattaaaagaactggagaagcaagagcaaacaaattcaaaagccagcagaagacaagaa
ataactaagatcagaggagaactgaaggagatagagacacaaaaaacccttccaaaaatc
aatgaatccagaagctggttttttgaaaacattaacaaaacagatagactactagccaga
ctaataaagaagaaaagagagaagaatcaaatagacacaatattaaatgataaaggggat
atcactaatgatcccacagaagtacaaactaccatcagagaatactacaaacacctctat
gcaaataaactagaaaatctagaagaaatggataaactcctggacacatacaccctccca
agactaaaccaggaagaagttgaatctctgaataatagcctaccaaccaaaaaaagccca
ggaccagacagattcacagctgaattgtaccagagatacaaacaggagctggtatcattc
cttctaaaactattccaaacaatagaaaaagagggactcctccctaactcattttatgag
gtcagcatcatgctgataccaaaacctggcagagatacaacaaaaaaagaaaatttcagg
ccgatatccctgatgaacattgatgtgaaaatcctcaataaaatactggcaaaccgaatc
cagcagcacatcagaaagtttatccatcacgatcaagttggcttcatccctgggatgcaa
ggctggttcaacatacacaatccatcacataaacagaaccaatga

>gi568815575f:8365451_8566380|GENSCAN_predicted_peptide_10|66_aa
TELQETVEAEMTNMELGNESHIIPHEVLKSERSAGPQGMDIIPHKRSSVDECRELEKRIA
WAENSA

>gi568815575f:8365451_8566380|GENSCAN_predicted_CDS_10|201_bp
acagaactacaggaaacagtggaagcagaaatgaccaacatggagttggggaatgagagt
cacatcatccctcatgaagtcctgaagagtgagcgatctgcaggcccacaaggaatggac
atcattccacacaaacgcagcagcgtggatgagtgtagagagttagagaagcgcattgca
tgggcagagaactcagcgtga