GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:32:01

Sequence gi568815575f:47270669_47513591 : 242923 bp : 44.76% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1470   1465    6                              -0.45
 1.02 Term -   3147   2698  450  0  0   37   48   239 0.862   9.99
 1.01 Init -   3788   3672  117  2  0   61   75   114 0.633   5.60
 1.00 Prom -   7594   7555   40                              -5.06

 2.00 Prom +   9956   9995   40                              -5.86
 2.01 Init +  19432  19486   55  0  1   78  106    21 0.575   4.35
 2.02 Term +  30222  30400  179  1  2  -47   40   249 0.324   4.45
 2.03 PlyA +  35146  35151    6                               1.05

 3.04 PlyA -  36054  36049    6                               1.05
 3.03 Term -  42425  42409   17  0  2  134   42    27 0.713   1.10
 3.02 Intr -  42659  42566   94  2  1   85   80    24 0.727   0.84
 3.01 Init -  50861  50709  153  2  0  109   55   153 0.981  14.08
 3.00 Prom -  62376  62337   40                              -2.36

 4.00 Prom +  75071  75110   40                              -5.36
 4.01 Init +  79680  79690   11  2  2   84   87    17 0.057   1.07
 4.02 Intr +  95707  95833  127  1  1   56   70   124 0.295   8.08
 4.03 Term + 110117 110614  498  1  0  109   42  1125 0.999 104.52
 4.04 PlyA + 110718 110723    6                               1.05

 5.00 Prom + 126238 126277   40                              -4.86
 5.01 Init + 127130 127261  132  1  0   56   97    61 0.589   3.95
 5.02 Intr + 139608 139734  127  2  1   26   68   175 0.808   9.55
 5.03 Intr + 140012 140107   96  0  0   91  111   114 0.991  13.98
 5.04 Term + 141701 142926 1226  0  2   46   49   833 0.985  66.99
 5.05 PlyA + 147651 147656    6                               1.05

 6.03 PlyA - 148493 148488    6                               1.05
 6.02 Term - 168432 168103  330  0  0  -37   48   347 0.948  12.86
 6.01 Init - 172883 172881    3  2  0   98   53     0 0.168  -2.50
 6.00 Prom - 173020 172981   40                              -4.76

 7.07 PlyA - 173332 173327    6                              -0.45
 7.06 Term - 178806 176762 2045  1  2  133   54  1400 0.829 126.47
 7.05 Intr - 185450 185253  198  0  0   81  109    72 0.895   7.92
 7.04 Intr - 185730 185604  127  0  1   98   94   163 0.884  18.15
 7.03 Intr - 200397 200340   58  2  1   62   92    49 0.005   1.59
 7.02 Intr - 212635 212456  180  0  0   69   52   132 0.002   6.68
 7.01 Init - 226071 225971  101  0  2   60   27   102 0.119   1.03
 7.00 Prom - 240761 240722   40                              -6.16

 8.02 PlyA - 240777 240772    6                               1.05
 8.01 Sngl - 242905 241934  972  1  0   99   40   897 0.996  80.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_1|188_aa
MAGRAGGRGLEQLLHLIAAASTMSRVLVPCHVKGTVALQHTSAHTPAKWVTCLWDYCLMP
NPHSEEGAQEYVSLFKQQILCDMARISELHLILQQPSPLWLSFTVEELQIYQQGPKSPSM
IFPKWLSHPVPCEQPALLHEGLPDPSRVSSEVQQMWALTEMIRASHTSARIGHFDVDGCY
DLNLLSYT

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_1|567_bp
atggcaggaagggctggaggtcggggcctggagcagctattgcacttaatcgcggctgct
agcaccatgtcccgcgttttggtgccttgccatgtgaaaggcaccgtagccctgcagcac
acctcagcacacacaccggccaagtgggtgacctgcctgtgggactactgtctgatgccc
aacccacacagtgaggagggagcccaggagtatgtgtcgctgttcaagcaacagatactg
tgtgacatggccagaatatcggagctacacctgattctgcagcagccatcaccactgtgg
ctgtctttcacagtggaggagctgcagatctatcagcagggaccaaagagcccctccatg
atcttccccaagtggctctcccacccagtgccctgtgagcaacctgcactcctccatgag
ggtctcccagaccccagcagggtatcctctgaggtgcagcagatgtgggcactgacagag
atgatccgggccagtcacacctccgcgaggataggccactttgatgtagatggctgttat
gacctgaacttactctcctacacttga

>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_2|77_aa
MAKFAVYNQKYPTNPRKEKGNSFEEEEGEEEEEEEEEERGEGEEEEEEEEEKGEGEEEET
IWLILGQSHIASTYLHD

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_2|234_bp
atggcaaaatttgctgtctataatcagaaatatcccactaatccaaggaaagaaaagggg
aactccttcgaagaagaagaaggagaagaagaagaagaagaagaagaagaagaaagagga
gaaggagaggaggaggaggaggaggaggaggaaaaaggggaaggggaagaagaagaaaca
atatggttaattttaggccagagtcacatagctagcacatatctccatgactaa

>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_3|87_aa
MAAPEEGYSVGAAILFEVKAKDAEGRVAPLSGGLCSLKSPPTPLVYNRKSPLNLKKCDKP
TLLCCCLTTAWPLDKLASNVKPRHCYM

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_3|264_bp
atggcggcgcccgaggaaggctacagtgtgggcgccgccattttgtttgaggttaaggca
aaggatgctgaaggacgagtagcaccgctgtcgggagggctatgttcgttgaaatcgccc
cctactcccctggtctacaaccgcaaatccccactgaatctaaagaaatgtgacaagcca
actttactgtgctgctgcttaacaactgcttggccgcttgacaaattggcatccaacgtg
aagccaaggcactgctacatgtaa

>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_4|211_aa
MIEFPLYGMGAKMAAPKRHDIAQPYSSPDNATHGPSLRRSVTALCSEEQEKQEEEDEQER
KEEEKEEEEEQEEEKEKEEQEEEKEKEEQEEEKEKEEEQEEQEKEKEEQEEEEKEKEEEE
EEEQEEEEQEEEKEKEEEQEEEEQEEEEKEKEEEQKEKEQEEEEQEEEEKEKEEEQKEKE
QEEEKQQEEEQQEEEEQEEEQGAIIILERQF

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_4|636_bp
atgattgaattcccactgtacggaatgggtgctaagatggcggctcccaagagacacgac
atagcgcagccatattcctcgcctgacaacgccactcatggaccaagtctccgccgatcc
gtaacagcgctgtgttcagaggaacaggagaagcaggaggaggaggatgagcaggagaga
aaggaggaggagaaagaggaggaagaggagcaggaggaggagaaagagaaggaggagcag
gaggaggagaaagagaaggaggagcaggaggaggagaaagagaaggaggaggaacaggag
gagcaggagaaagaaaaggaggagcaggaggaggaggagaaagagaaggaggaggaggag
gaagaggagcaggaggaggaggagcaggaggaggagaaagagaaggaggaagagcaggag
gaggaggagcaggaggaggaggagaaagagaaggaggaagagcagaaggagaaagagcag
gaggaggaggagcaggaggaggaggagaaagagaaggaggaagagcagaaggagaaagag
caggaggaggagaagcagcaggaggaggagcagcaggaggaagaggagcaggaggaggag
cagggagcaattattattttagagagacagttttaa

>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_5|526_aa
MRSLKWPCGSLSFQFNEITVVSLGGSFPPFGTETPTPVEHNIMKGSVSFEDVAVDFTRQE
WHRLDPAQRTMHKDVMLETYSNLASVGLCVAKPEMIFKLERGEELWILEEESSGHGYSGS
LSLLCGNGSVGDNALRHDNDLLHHQKIQTLDQNVEYNGCRKAFHEKTGFVRRKRTPRGDK
NFECHECGKAYCRKSNLVEHLRIHTGERPYECGECAKTFSARSYLIAHQKTHTGERPFEC
NECGKSFGRKSQLILHTRTHTGERPYECTECGKTFSEKATLTIHQRTHTGEKPYECSECG
KTFRVKISLTQHHRTHTGEKPYECGECGKNFRAKKSLNQHQRIHTGEKPYECGECGKFFR
MKMTLNNHQRTHTGEKPYQCNECGKSFRVHSSLGIHQRIHTGEKPYECNECGNAFYVKAR
LIEHQRMHSGEKPYECSECGKIFSMKKSLCQHRRTHTGEKPYECSECGNAFYVKVRLIEH
QRIHTGERPFECQECGKAFCRKAHLTEHQRTHIGWSWRCTMKKASH

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_5|1581_bp
atgagaagccttaagtggccgtgtggcagtcttagcttccagttcaatgaaatcactgtt
gtatctcttggtggaagctttcctccttttggaacagagacccctacaccagtggagcat
aatatcatgaaggggtccgtgtcattcgaggatgtggctgtggatttcacccgacaggag
tggcacagactggaccctgctcagaggaccatgcacaaggatgtgatgctggagacctac
agcaacctggcatctgtgggcctctgcgtggccaaaccagagatgatcttcaagttggag
cgaggagaagagctgtggatattagaggaggaatcctcaggccatggttactcaggatct
ctctcactgctgtgtggcaatggttctgttggggataatgccctcaggcatgataatgac
cttcttcaccatcagaagattcaaacattggatcaaaatgttgaatataatggatgcagg
aaagccttccatgagaaaacaggctttgttagacgtaaaagaacacccagaggagataaa
aactttgaatgtcatgaatgtgggaaagcttactgtaggaagtcaaaccttgttgaacat
ctgagaatacacacaggagagagaccctatgaatgcggtgaatgtgcaaaaaccttcagt
gcaagatcatacctcattgctcatcagaaaactcacacaggggagaggccctttgaatgt
aatgaatgtgggaaatcttttggcaggaagtcacaactcatcctacatacaagaacacac
actggagagagaccctatgaatgtactgaatgtgggaaaaccttttctgagaaggcaacc
ctcacgattcatcagagaactcacacaggggagaaaccctatgaatgtagtgaatgtggg
aaaacatttcgtgtaaagatatcccttacccaacaccacagaactcatacaggggagaaa
ccttatgaatgtggggagtgtgggaaaaacttccgtgcaaagaaatccctaaatcagcat
caaagaattcacacaggtgagaaaccctatgagtgtggtgaatgtgggaaattcttccga
atgaagatgactctcaataatcatcaaagaactcacacaggtgaaaagccctatcagtgt
aatgaatgtgggaaatctttcagggtgcactcatctcttgggatccatcagagaattcac
acaggagagaaaccttacgaatgtaatgagtgtggtaatgctttctatgtgaaagcacgc
ctaattgaacatcagaggatgcattcaggagagaaaccctacgaatgtagtgaatgtggg
aaaatcttcagtatgaagaaatccctttgtcaacaccggagaactcacacaggagagaaa
ccttatgaatgtagtgaatgtggaaatgccttctatgtgaaagtacgcctcattgaacat
cagcgaattcacacaggagagagaccctttgagtgtcaagaatgtgggaaagctttctgc
cggaaagcacacctcacagaacatcagagaactcacataggctggtcctggcgttgtaca
atgaagaaagcctctcactga

>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_6|110_aa
MHLEAVEESDEEEDAKSLSLSGKQSAPGSSSKYPHKLKLATDEDEYDEEDDEDGEHNEET
EEKAPVEKSIRGTPAKNTQKSNEMKMTHYHQHQDQKSRILSKTGKNLLKH

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_6|333_bp
atgcacttagaagctgtggaggagtcagatgaagaggaggatgccaaatccctaagtcta
tctggaaagcaatctgcccctggaagcagcagcaagtatccacataaactaaaacttgct
actgatgaagatgaatatgatgaggaagatgatgaagatggtgaacataatgaggaaact
gaagaaaaagccccagtggagaaatctatacgaggcactccagccaaaaatacacaaaaa
tcaaacgagatgaaaatgactcactaccatcaacaccaagatcagaagtcaagaatcctt
tcaaaaacaggaaaaaacctcctaaaacattga

>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_7|902_aa
MDVESTAGEDSEEVKKMVEKVYIILEKTCIIISISTVPGAESPQPSAPTEVKLSLLATSA
SWPKSDTHDSPRGNCTGSVTAETPSVSRSRPGSRWTVDLNVKAKMIKLLHDPEASVSFED
VTVDFSKEEWQHLDPAQRRLYWDVTLENYSHLLSVVKCVYFSEKQRESVTERPLKPNQLD
PIVYHVLLTGYQIPKSEAAFKLEQGEGPWMLEGEAPHQSCSGEAIGKMQQQGIPGGIFFH
CERFDQPIGEDSLCSILEELWQDNDQLEQRQENQNNLLSHVKVLIKERGYEHKNIEKIIH
VTTKLVPSIKRLHNCDTILKHTLNSHNHNRNSATKNLGKIFGNGNNFPHSPSSTKNENAK
TGANSCEHDHYEKHLSHKQAPTHHQKIHPEEKLYVCTECVMGFTQKSHLFEHQRIHAGEK
SRECDKSNKVFPQKPQVDVHPSVYTGEKPYLCTQCGKVFTLKSNLITHQKIHTGQKPYKC
SECGKAFFQRSDLFRHLRIHTGEKPYECSECGKGFSQNSDLSIHQKTHTGEKHYECNECG
KAFTRKSALRMHQRIHTGEKPYVCADCGKAFIQKSHFNTHQRIHTGEKPYECSDCGKSFT
KKSQLHVHQRIHTGEKPYICTECGKVFTHRTNLTTHQKTHTGEKPYMCAECGKAFTDQSN
LIKHQKTHTGEKPYKCNGCGKAFIWKSRLKIHQKSHIGERHYECKDCGKAFIQKSTLSVH
QRIHTGEKPYVCPECGKAFIQKSHFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIH
TGEKPNICAECGKAFTDRSNLITHQKIHTREKPYECGDCGKTFTWKSRLNIHQKSHTGER
HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA
SD

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_7|2709_bp
atggatgttgaaagcactgctggtgaggactcagaagaagtaaagaagatggtagagaaa
gtctatatcatcttagagaagacatgtatcatcataagcatatccacggtcccgggcgct
gaatccccgcaaccctctgcgcccacagaggttaaactctcgctgctggcgacttccgct
tcctggcctaaatctgacacgcacgactccccccgcggcaactgcacaggttcggtgaca
gccgagacgccgagtgtttcccgcagccggccggggtccagatggactgtggacctaaat
gtgaaagctaaaatgataaaacttttacatgaccctgaggcttcagtgtcatttgaggac
gtgactgtggacttcagcaaggaggagtggcagcacttggaccctgcccagagacgcctg
tactgggatgtgacactagagaactacagccacctgctctcagtggtgaaatgtgtttac
ttttctgaaaagcaaagggaaagtgtcactgaaaggcccctgaaacccaatcagctggac
ccaatcgtgtatcatgtcctgttaacagggtaccaaattcccaagtcagaggctgccttc
aagttggagcaaggagaggggccatggatgctggagggggaagccccacatcagagctgt
tcaggtgaggctattgggaaaatgcagcaacagggaattcctggaggaattttcttccac
tgtgagagatttgatcaacccataggagaagattcattatgttctattttagaagaactg
tggcaagataatgaccagctagagcaacgtcaggaaaaccagaataaccttttaagtcat
gtgaaagtattgattaaggagaggggctatgaacataaaaacattgaaaaaataattcat
gtgactaccaagcttgttccttcaattaaaagactccataactgtgacacaattttgaag
catactttaaactcacataatcataatagaaacagtgcaacaaagaaccttggcaagatt
tttggaaatggtaacaatttcccccatagcccttcctctactaagaatgagaatgctaaa
acaggagcaaattcctgtgaacatgaccactatgaaaaacatctcagccacaaacaagct
cccacccaccatcagaaaattcatcctgaggagaagctttatgtgtgtactgaatgtgta
atgggcttcactcagaagtcacatctgtttgagcatcagagaattcatgctggagaaaag
tcccgtgaatgtgacaaaagcaacaaagtcttcccccagaaaccccaggttgatgtacat
ccaagtgtttatacaggagaaaaaccctatctgtgtactcaatgtgggaaagtctttacc
ctcaaatcaaacctcattacacatcaaaaaattcataccgggcagaaaccctacaaatgc
agtgaatgtggaaaagcctttttccagagatcagacctctttagacatctgagaattcat
acaggagaaaaaccttatgaatgcagtgaatgtggaaaaggcttctcccagaactcagac
ctcagtatacatcagaaaactcataccggagagaaacactatgaatgcaatgaatgtggg
aaggctttcacaagaaaatcagcactcaggatgcatcagagaatccacacgggagagaaa
ccttatgtatgcgctgactgtgggaaggccttcatccagaaatcacatttcaacacacat
cagagaattcatactggagaaaagccgtatgaatgcagtgactgtgggaaatccttcact
aagaagtcacaactccatgtgcatcaaagaattcacaccggagagaaaccctatatatgt
acagaatgtggaaaggtcttcactcacaggacaaacctcaccacacatcagaaaactcat
actggggaaaaaccctatatgtgtgctgaatgtggaaaggcttttactgaccagtcaaat
ctcattaaacaccagaaaactcacactggagagaaaccctataagtgcaatggctgtgga
aaagccttcatatggaagtcgcgcctcaaaatacatcagaaatctcatattggagagaga
cactatgaatgcaaggactgcgggaaagccttcatccagaaatcaacactaagcgtgcat
cagagaatccatacaggagagaaaccgtacgtttgtcctgaatgcgggaaggcctttatc
cagaaatcgcacttcattgcgcatcatagaatccatactggagagaagccttatgaatgc
agcgactgtgggaaatgcttcactaagaagtcacaactccgtgtgcatcagaaaatccac
acaggtgagaagcccaatatatgtgctgaatgtggaaaggccttcactgaccgatcaaat
ctcataacacatcagaaaatccacactagggagaaaccctatgaatgtggtgactgcggg
aaaaccttcacctggaagtcacgcctcaatatacatcagaagtctcatactggagaaaga
cactatgaatgtagtaaatgtgggaaagctttcatccagaaagccacactaagtatgcat
cagataattcatacaggaaagaaaccttatgcttgtacagaatgtcagaaggcctttact
gacagatcgaatctcattaaacaccagaaaatgcatagtggagaaaaacgctataaagcc
agtgactga

>gi568815575f:47270669_47513591|GENSCAN_predicted_peptide_8|323_aa
MARAAAGADKKPSRCGSGREGEGLSEGHKSMTGLYELVWRVLHALLCLHRTLTSWLRVRF
GTWNWIWRRCCRAASAAVLAPLGFTLRKPPAVGRNRRHHRHPRGGSCLAAAHHRMRWRAD
GRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMD
EILKQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQL
VAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL
NISYEDFFSALRQYAACEQRLGK

>gi568815575f:47270669_47513591|GENSCAN_predicted_CDS_8|972_bp
atggcccgcgcggccgcaggggcggataaaaagccgtcgcgctgcgggagtgggcgggag
ggagaggggttgtccgagggccacaagagtatgacggggctgtacgagctggtgtggcgg
gtgctgcacgcgctgctctgtctgcaccgcacgctcacctcctggctccgcgttcggttc
ggcacctggaactggatctggcggcgctgctgccgagccgcctctgccgcggtcctagcg
ccgctcggcttcacgctccgcaagcccccggcagtcggcaggaaccgccgtcaccaccgg
cacccgcgcggggggtcgtgcctggcagccgcacaccaccggatgcgctggcgcgcggac
ggtcgttccttggagaagctgcctgtgcatatgggcctggtgatcaccgaggtggagcag
gaacccagcttctcggacatcgcgagcctcgtggtgtggtgtatggccgtgggcatctcc
tacattagcgtctacgaccaccaaggtattttcaaaagaaataattccagattgatggat
gaaattttaaaacaacagcaagaacttctgggcctagattgttcaaaatactcaccagaa
tttgcaaatagtaatgacaaagacgatcaagttttaaattgccatttggcagtgaaggtg
ctgtctccggaagatggaaaagcagatattgtaagagctgctcaggacttttgccagtta
gtggcccagaagcaaaagagacccacagatttggatgtagatacgttaggcagtttactt
agttcaaatggttgtcctgatcctgatttagtattgaagttcggtcctgtggacagcaca
ttaggctttcttccctggcacatcagattgactgagattgtctctttgccttcccaccta
aacatcagttatgaggactttttctctgcccttcgtcaatatgcagcctgtgaacagcgt
ctgggaaagtag