GENSCAN 1.0	Date run:  7-Nov-116	Time: 04:41:58

Sequence gi568815575f:149674682_149876787 : 202106 bp : 43.68% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8734   8777   44  0  2   86   78    15 0.145   0.22
 1.02 Intr +  14894  14984   91  2  1  105   86    52 0.535   6.70
 1.03 Intr +  39800  39895   96  1  0   63   94    67 0.874   5.01
 1.04 Intr +  40923  40996   74  2  2   95   84     2 0.839  -1.30
 1.05 Term +  41072  42095 1024  2  1  110   53   601 0.965  50.39
 1.06 PlyA +  42358  42363    6                               1.05

 2.00 Prom +  56886  56925   40                              -3.56
 2.01 Init +  84111  84315  205  2  1  100   44   169 0.505  12.04
 2.02 Intr +  85030  85229  200  2  2    5   81   137 0.625   3.77
 2.03 Intr +  85473  85532   60  2  0  103   91    -4 0.475   0.33
 2.04 Intr +  86098  86193   96  0  0   63   94    75 0.958   5.81
 2.05 Intr +  94216  94392  177  0  0   86   99   105 0.856  11.52
 2.06 Intr +  95018  95141  124  1  1   81   40    85 0.997   3.16
 2.07 Intr +  96443  96641  199  0  1   68   47   189 0.970  11.21
 2.08 Intr +  96768  96872  105  0  0  118   66    39 0.482   4.03
 2.09 Intr +  97424  97535  112  2  1   16   98    56 0.422  -0.22
 2.10 Intr + 100304 100564  261  1  0  101   90   191 0.726  18.28
 2.11 Term + 101402 102109  708  1  0   33   44   390 0.970  22.61
 2.12 PlyA + 102142 102147    6                               1.05

 3.00 Prom + 106460 106499   40                              -4.16
 3.01 Init + 110085 110142   58  2  1   74   44    45 0.162   0.17
 3.02 Intr + 111321 111389   69  1  0   93   95     3 0.551   0.65
 3.03 Term + 111465 112477 1013  1  2  122   53  1083 0.978 100.47
 3.04 PlyA + 113037 113042    6                               1.05

 4.00 Prom + 125630 125669   40                              -6.06
 4.01 Init + 132907 132928   22  0  1   83  113    -2 0.755   1.69
 4.02 Intr + 133315 133388   74  2  2  115   84    48 0.980   6.23
 4.03 Intr + 133464 133688  225  2  0  121   36   195 0.910  15.78
 4.04 Term + 134247 134474  228  2  0   21   53   202 0.784   6.63
 4.05 PlyA + 134949 134954    6                               1.05

 5.04 PlyA - 136298 136293    6                               1.05
 5.03 Term - 138032 137935   98  0  2   98   49    64 0.425   1.63
 5.02 Intr - 141923 141847   77  1  2   93   89    23 0.300   2.06
 5.01 Init - 146904 146741  164  0  2   61   72    75 0.226   2.40
 5.00 Prom - 147850 147811   40                              -4.96

 6.06 PlyA - 148022 148017    6                               1.05
 6.05 Term - 149213 148941  273  2  0   56   34   246 0.774  11.47
 6.04 Intr - 149454 149368   87  0  0   75   41    79 0.631   2.07
 6.03 Intr - 154845 154615  231  0  0   58   93   109 0.711   6.37
 6.02 Intr - 159422 159192  231  2  0   78   93    43 0.584   1.77
 6.01 Init - 166272 166267    6  0  0   70   87     0 0.160  -1.02
 6.00 Prom - 173274 173235   40                              -2.76

 7.02 PlyA - 173754 173749    6                               1.05
 7.01 Sngl - 175746 175516  231  0  0   60   42   158 0.355   3.51
 7.00 Prom - 177509 177470   40                              -1.86

 8.00 Prom + 179683 179722   40                              -5.66
 8.01 Init + 183412 183457   46  0  1   87   84    47 0.855   5.07
 8.02 Term + 184233 184372  140  1  2  101   48    60 0.823   1.43
 8.03 PlyA + 185095 185100    6                               1.05

 9.00 Prom + 188836 188875   40                              -0.46
 9.01 Init + 189942 190045  104  2  2   67   74    41 0.290   0.32
 9.02 Term + 199507 199723  217  1  1  -20   54   211 0.534   3.52
 9.03 PlyA + 199807 199812    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_1|442_aa
MEGKGLKVGVVDCLGQWALMPYLLQNTGDAPALLGKPCARRPSSKVSTMFSEDDFQSTER
APYGPQLQWSQDLPRVQVFREQANLEDRSPRRTQRITGGEQVLWGPITQIFPTVRPADLT
RVIMPLEQRSQHCKPEEGLQAQEEDLGLVGAQALQAEEQEAAFFSSTLNVGTLEELPAAE
SPSPPQSPQEESFSPTAMDAIFGSLSDEGSGSQEKEGPSTSPDLIDPESFSQDILHDKII
DLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSH
SYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGR
EHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANAN
GRDPTSYPSLYEDALREEGEGV

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_1|1329_bp
atggagggcaaggggctgaaagttggagtcgttgattgtttggggcagtgggccctgatg
ccttacctgctacagaacactggggatgcccctgcactgctgggaaagccctgtgctaga
agaccttcctcaaaggtgagcactatgttctcagaggacgacttccagtcaacagaaaga
gccccatatggtccacaactacagtggtcccaggatctgccaagagtccaggtttttaga
gaacaggccaacctggaggacaggagtcccaggagaacccagaggatcactggaggagaa
caagtgctgtggggccccatcacccagatatttcccacagttcggcctgctgacctaacc
agagtcatcatgcctcttgagcaaagaagtcagcactgcaagcctgaggaaggccttcag
gcccaagaagaagacctgggcctggtgggtgcacaggctctccaagctgaggagcaggag
gctgccttcttctcctctactctgaatgtgggcactctagaggagttgcctgctgctgag
tcaccaagtcctccccagagtcctcaggaagagtccttctctcccactgccatggatgcc
atctttgggagcctatctgatgagggctctggcagccaagaaaaggaggggccaagtacc
tcgcctgacctgatagaccctgagtccttttcccaagatatactacatgacaagataatt
gatttggttcatttattgctccgcaagtatcgagtcaaggggctgatcacaaaggcagaa
atgctggggagtgtcatcaaaaattatgaggactactttcctgagatatttagggaagcc
tctgtatgcatgcaactgctctttggcattgatgtgaaggaagtggaccccactagccac
tcctatgtccttgtcacctccctcaacctctcttatgatggcatacagtgtaatgagcag
agcatgcccaagtctggcctcctgataatagtcctgggtgtaatcttcatggaggggaac
tgcatccctgaagaggttatgtgggaagtcctgagcattatgggggtgtatgctggaagg
gagcacttcctctttggggagcccaagaggctccttacccaaaattgggtgcaggaaaag
tacctggtgtaccggcaggtgcccggcactgatcctgcatgctatgagttcctgtggggt
ccaagggcccacgctgagaccagcaagatgaaagttcttgagtacatagccaatgccaat
gggagggatcccacttcttacccatccctgtatgaagatgctttgagagaggagggagag
ggagtctga

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_2|748_aa
MPEPPPRSVGSCAARASWTSATPCSTAPSPIDHPRAEECRRTARDWQAAPPVALVPDPLG
EASWAPESGGTNNSRRATLRAVTLTAKVRSFTPEPARPRTPPEGRNSEHQKEQTLDTPPL
RTVTLTVRVHGFILEVFRFTHDNACPFPFIPWRPQVSTMFSEDDFQSTERAPYGPQLQWS
QDLPRVQVVCVPLWILMSFLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVV
PLLTFEILLVHKLDGHNAFSSIPIFVPLWLSLITLMATTFGQKGGNHWWFGIRKDFCQFL
LEIFPFLREYGNISYDLHHEDNEETEETPVPEPPKIAPMFRKKARVVIAQSPGKPEPVLE
LGLQVRPSHALFASSAYQPLTTTGRGSGRHMPSAAEVDARGTLPPPPPWGATPSWDIATS
ALELVQKLWRLVSSNQFSSIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFR
QLNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPYFQRDSPHLLVRMKRRVGVK
SAPRHQEEDKPEAAGSCLAPADTEQQDHTSPNENDQVTPQHREPAGPNTQIRSGSAPPAT
PVMVPDSAVASDNSPVTQPAGEWSEGSQAHVTPVAAVPGPAALPFLYVPGSPTQMNSYGP
VVALPTASRSTLAMDTTGLPAPGMLPFCHLWVPVTLVAAGAAQPAASMVMFPHLPALHHH
CPHSHRTSQYMPASDGPQAYPDYADQST

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_2|2247_bp
atgcctgagcctccccctcgctccgtgggctcctgtgctgcccgagcctcctggacgagc
gccactccctgctccacggcacccagtcccatcgaccacccaagggctgaggaatgccgg
cgcacggcgcgggactggcaggcagctccacctgtggccctggtgcccgatccactgggt
gaagccagctgggctcctgagtctggaggaacgaacaactccagacgcgccaccttaaga
gctgtaacactcaccgcgaaggtccgcagcttcactcctgagccggcgagaccacgaacc
ccaccagaaggaagaaactccgaacatcagaaggaacaaactctggacacgccgccctta
agaactgtaacactcaccgtgagggtccacggcttcattcttgaagtattcagatttact
catgacaatgcctgcccctttcccttcatcccctggaggccccaggtgagcactatgttc
tcagaggacgacttccagtcaacagaaagagccccgtatggtccacaactacagtggtcc
caggatctgccaagagtccaggttgtgtgtgtcccgctgtggattctcatgtcctttctg
tgcctggtggtcctctactacattgtgtggtccgtcttgttcttgcgctctatggatgtg
attgcggagcagcgcaggacacacataaccatggccctgagctggatgaccatcgtcgtg
ccccttcttacatttgagattctgctggttcacaaactggatggccacaacgccttctcc
agcatcccgatctttgtccccctttggctctcgttgatcacgctgatggcaaccacattt
ggacagaagggaggaaaccactggtggtttggtatccgcaaagatttctgtcagtttctg
cttgaaatcttcccatttctacgagaatatggaaacatttcctatgatctccatcacgaa
gataatgaagaaaccgaagagaccccagttccggagccccctaaaatcgcacccatgttt
cgaaagaaggccagggtggtcattgcccagagccctgggaaaccagaaccagtactggag
ctgggtctccaggtacgtccatctcatgccttgtttgcatccagcgcctatcagccactc
accacgacgggacgcggaagtggcaggcacatgccttctgctgcagaagtggacgcccgt
ggcacactcccccccccccccccgtggggtgccacgccttcatgggacattgccacttct
gccctggaactcgtgcagaaactgtggagactggtcagcagcaaccagttttcgtccatc
tggtgggatgacagtggggcttgtagagtgatcaatcaaaaactctttgaaaaggagatt
ctcaaaagggacgtcgcacacaaagtgtttgccacaacttcgataaagagcttcttccgc
cagctaaacttgtatggcttccgaaaacggcgtcaatgcactttcaggaccttcacccgc
attttctccgcaaaaaggctggtctccatcttgaataagttagagttctactgccatcct
tactttcaaagagactcccctcacctcctcgtgaggatgaagagaagagtgggtgtcaag
tctgcaccaagacatcaggaggaggacaagccagaagctgctggatcctgtctggcacca
gcagacactgagcaacaagatcacacgtctccgaatgagaatgaccaggtcacaccgcaa
caccgggaaccggccggtcccaacacccaaatcaggagtggctctgctccaccagcaact
cctgtgatggtgcctgattccgccgtggcgagtgacaacagtccagtgacccagccggcc
ggcgagtggtcagagggcagccaggctcacgtcactccggtggccgctgtccctgggcct
gcagcgctgcccttcctctatgtccctggatctcccactcagatgaattcttacgggcct
gtggtggcccttcccacagcgtcccgtagtacccttgccatggacaccacaggacttcct
gcacctggcatgctgcccttttgccatctctgggtaccggtgaccctagtggctgctggg
gctgcacagcctgctgcctccatggtcatgttcccccatctcccagctctgcaccaccat
tgcccccacagccaccgcacgtcacagtacatgccagctagcgatgggccccaggcgtac
ccagactacgcagaccagagcacatag

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_3|379_aa
MNNPQEDFGTPTSYLKGSAGSRDRLTRRTGAPRGPRAALTKTCLWVSIAQLLPTLLTAAL
TRVIMSLEQRSPHCKPDEDLEAQGEDLGLMGAQEPTGEEEETTSSSDSKEEEVSAAGSSS
PPQSPQGGASSSISVYYTLWSQFDEGSSSQEEEEPSSSVDPAQLEFMFQEALKLKVAELV
HFLLHKYRVKEPVTKAEMLESVIKNYKRYFPVIFGKASEFMQVIFGTDVKEVDPAGHSYI
LVTALGLSCDSMLGDGHSMPKAALLIIVLGVILTKDNCAPEEVIWEALSVMGVYVGKEHM
FYGEPRKLLTQDWVQENYLEYRQVPGSDPAHYEFLWGSKAHAETSYEKVINYLVMLNARE
PICYPSLYEEVLGEEQEGV

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_3|1140_bp
atgaataacccgcaggaggactttggaacacccacctcatacctgaagggttcagctggt
tctcgggacaggctaaccaggaggacaggagccccaagaggccccagagcagcactgacg
aagacctgcctgtgggtctccatcgcccagctcctgcccacgctcctgactgctgccctg
accagagtcatcatgtctctcgagcagaggagtccgcactgcaagcctgatgaagacctt
gaagcccaaggagaggacttgggcctgatgggtgcacaggaacccacaggcgaggaggag
gagactacctcctcctctgacagcaaggaggaggaggtgtctgctgctgggtcatcaagt
cctccccagagtcctcagggaggcgcttcctcctccatttccgtctactacactttatgg
agccaattcgatgagggctccagcagtcaagaagaggaagagccaagctcctcggtcgac
ccagctcagctggagttcatgttccaagaagcactgaaattgaaggtggctgagttggtt
catttcctgctccacaaatatcgagtcaaggagccggtcacaaaggcagaaatgctggag
agcgtcatcaaaaattacaagcgctactttcctgtgatcttcggcaaagcctccgagttc
atgcaggtgatctttggcactgatgtgaaggaggtggaccccgccggccactcctacatc
cttgtcactgctcttggcctctcgtgcgatagcatgctgggtgatggtcatagcatgccc
aaggccgccctcctgatcattgtcctgggtgtgatcctaaccaaagacaactgcgcccct
gaagaggttatctgggaagcgttgagtgtgatgggggtgtatgttgggaaggagcacatg
ttctacggggagcccaggaagctgctcacccaagattgggtgcaggaaaactacctggag
taccggcaggtgcccggcagtgatcctgcgcactacgagttcctgtggggttccaaggcc
cacgctgaaaccagctatgagaaggtcataaattatttggtcatgctcaatgcaagagag
cccatctgctacccatccctttatgaagaggttttgggagaggagcaagagggagtctga

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_4|182_aa
MRPLQEKGSQRTGRPGGQKPQEAPEEHRRRRSICGFLPIAQLLPALQPAALTRVIMSSEQ
RSQHCKPEDGLEAQGQEALGLVGVQAPATEEHEAASSFTLIEGTLEELRKLLTQDWVQEN
YLQYRQVPSSDPPCYQFLWGPRALIETSYVKVLEYAARVSTKESISYPSLHEEALGEEEE
GV

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_4|549_bp
atgaggcccctccaggagaaaggttctcagcggacaggccggccaggaggtcagaagccc
caggaggccccagaggagcaccgaaggagaagatctatctgtgggttcctccccatcgcc
cagctgctgcccgcactccagcctgctgccctgaccagagtcatcatgtcttctgagcag
aggagtcagcactgcaagcctgaggatggccttgaggcccaaggacaggaggctctgggc
ctggtgggtgtgcaggctcccgccaccgaggagcacgaggctgcctcctccttcactctg
attgaaggcaccctggaggagctgaggaagctgctcacccaagattgggtgcaggaaaac
tacctgcaataccgccaggtgcccagcagtgatcccccgtgctaccagttcctgtggggt
ccaagggccctcattgaaaccagctatgtgaaagtcctggagtatgcagccagggtcagt
actaaagagagcatttcctacccatccctgcatgaagaggctttgggagaggaggaagag
ggagtctga

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_5|112_aa
MNKFLDTYAFSSLNQEEVESLNRPITPSDIEAIINSLPTKKRRGPDRFTAELYQRGYLCR
FVAWVYCVSQRFGVLTTYHSDGSEKTSFALKFSEFASVYHVADAFKCINPSN

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_5|339_bp
atgaataaattcctggacacatacgccttctcaagcctaaaccaggaagaagttgaatcc
ctgaatagaccaataacaccctccgatattgaggcaataattaatagcctaccaaccaaa
aaacgtcgaggaccagacagattcacagccgaattgtaccagagggggtacctgtgcaga
tttgttgcatgggtatattgcgtgtctcagaggtttggtgtactgacgacttatcactca
gacggttctgagaagaccagttttgccttgaaattctctgaatttgcaagtgtctaccac
gtagcagatgctttcaaatgcattaacccatcaaattga

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_6|275_aa
MIKGYTRQQFCHESTPNKGDRVIYNLTCPPYCCVWFPLAGTGPHILYLSRLASNLELFKR
GKGRGEQRKEEVTCGMLRKKGYTRQQFCHENTPNKGDRVIYDLTHPPYCCVRFPLAGTGP
HILYSSQMASNLGVFRRGKGRGEQRKEEVNCGMLRKPPRVIDTQANGVWSGPRQTPTDLQ
LKVLTKCSSLPATEQSWMENDFDELRKEGFRRSVITNFSKLKEDVQTHRKEAKNLEKGLD
EWLTRINSIEKTLNDLMELKTMARELRDICTSFSS

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_6|828_bp
atgattaaagggtacactcgccagcagttttgccatgagagtacaccaaacaaaggagac
agggtcatttataacctgacatgtccaccctactgctgtgtctggtttccattggctgga
acgggacctcacattctttatttgtcccgattggctagcaacttagagctttttaaaaga
ggcaaaggtagaggagaacaaaggaaggaggaagtaacttgtggaatgctgagaaagaaa
gggtacactcgccagcagttttgccacgagaatacaccaaacaaaggagacagggtcatt
tatgacctgacgcatccaccctactgctgtgtccggtttccattggctggaacgggacct
cacattctgtattcgtcccaaatggctagcaacttaggagtttttagaagaggcaaaggt
agaggagaacaaaggaaggaggaagtaaattgtggaatgctgagaaagcctcctcgggtg
attgatacccaggcaaacggggtctggagtggacctaggcaaactccaacagacctgcag
ctgaaggtcctgacgaaatgcagctccttgccagcaacagaacaaagctggatggagaat
gactttgacgagttgagaaaagaaggcttcagacgatcggtaataacaaacttctccaag
ctaaaggaggatgttcaaacccatcgcaaagaagctaaaaatcttgaaaaaggattagat
gaatggctaactagaataaacagcatagagaagaccttaaatgacctgatggagctgaaa
accatggcacgagaactacgtgacatatgcacaagcttcagtagctga

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_7|76_aa
MNPGIKSQKYQGNQYKNVTLEELITLVSVRVKGDSKAVSGISPAFVKGSPESSAVPFGSY
HGLPETAKRTNNSKSI

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_7|231_bp
atgaatcctggaatcaagagccaaaagtatcaggggaatcaatacaaaaatgtgacccta
gaggaacttataacccttgtgtctgtgagagtgaaaggggactcaaaagctgtcagcggc
atctcccctgcatttgtcaaggggtctccagagtcatcagcagtgccttttgggtcctat
catgggttgccagaaactgctaaaagaacaaataacagcaaatcaatttaa

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_8|61_aa
MHRDSFLATSDNWGRGVNIGMDTSSSAPPPCTATSTGANTLMEASSSRPACVPPLLLPTL
A

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_8|186_bp
atgcaccgggactcattcctggcaaccagcgacaactggggaaggggtgtgaacataggc
atggacaccagcagctctgccccaccaccttgcactgccacctctactggtgcaaacaca
ctcatggaagccagcagctccaggcccgcctgtgtcccacccctgctgttgccaacattg
gcatga

>gi568815575f:149674682_149876787|GENSCAN_predicted_peptide_9|106_aa
MSFAAPWMELEAIILSELTQEQKTKYHMFSVISGRLIKDLNVKLMKTLENNLNNTIEDIA
MGKDFMTNMLKAIATKAKIDKWDLIKLKRFCTAKETINKVNRKPAK

>gi568815575f:149674682_149876787|GENSCAN_predicted_CDS_9|321_bp
atgtcctttgcagcaccatggatggagctggaggccattattctaagtgaactaacacag
gaacagaaaaccaaataccacatgttctcagttataagtgggagattgatcaaagactta
aatgtaaaacttatgaaaaccctggaaaataacctaaacaataccattgaggacatagca
atgggcaaagatttcatgacaaacatgctgaaagcaattgcaacaaaagcaaaaattgac
aaatgggatctaattaagctaaaacgcttctgcacagcaaaggaaactatcaacaaagtg
aacagaaagcctgcaaaatga