(Linear) (Six-base) MAPSORT of: KIBB8360.seq Check: 2670 from: 1 to: 504
KIBB8360.orf
With 182 enzymes: SgfI *
March 3, 2008 11:05 ..
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 110 364 385 504
Size: 110 254 21 119
Fragments arranged by size:
254 119 110 21
ApoI r'AATT_y
Cuts at: 0 34 504
Size: 34 470
BanII G_rGCy'C
Cuts at: 0 375 504
Size: 375 129
BbsI GAAGACnn'nnnn_
Cuts at: 0 247 352 403 504
Size: 247 105 51 101
Fragments arranged by size:
247 105 101 51
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'
Cuts at: 0 10 44 504
Size: 10 34 460
Fragments arranged by size:
460 34 10
BciVI GTATCCnnnnn_n'
Cuts at: 0 75 504
Size: 75 429
BglI GCCn_nnn'nGGC
Cuts at: 0 52 504
Size: 52 452
Bme1580I G_kGCm'C
Cuts at: 0 170 196 208 504
Size: 170 26 12 296
Fragments arranged by size:
296 170 26 12
BpmI CTGGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 236 504
Size: 236 268
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 431 504
Size: 431 73
BsaXI ACnnnnnCTCCnnnnnnn_nnn'
Cuts at: 0 147 177 504
Size: 147 30 327
Fragments arranged by size:
327 147 30
BseYI C'CCAG_C
Cuts at: 0 189 504
Size: 189 315
BsgI GTGCAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 361 504
Size: 361 143
BsmI GAATG_Cn'
Cuts at: 0 55 394 504
Size: 55 339 110
Fragments arranged by size:
339 110 55
Bsp1286I G_dGCh'C
Cuts at: 0 170 196 208 375 504
Size: 170 26 12 167 129
Fragments arranged by size:
170 167 129 26 12
BstYI r'GATC_y
Cuts at: 0 257 504
Size: 257 247
BtsI GCAGTG_nn'
Cuts at: 0 157 504
Size: 157 347
CspCI CAAnnnnnGTGGnnnnnnnnnn_nn'
Cuts at: 0 402 437 504
Size: 402 35 67
Fragments arranged by size:
402 67 35
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 110 236 364 385 504
Size: 110 126 128 21 119
Fragments arranged by size:
128 126 119 110 21
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'
Cuts at: 0 242 274 504
Size: 242 32 230
Fragments arranged by size:
242 230 32
MspA1I CmG'CkG
Cuts at: 0 43 76 504
Size: 43 33 428
Fragments arranged by size:
428 43 33
PvuII CAG'CTG
Cuts at: 0 43 76 504
Size: 43 33 428
Fragments arranged by size:
428 43 33
SmlI C'TyrA_G
Cuts at: 0 446 504
Size: 446 58
StuI AGG'CCT
Cuts at: 0 313 504
Size: 313 191
TstI CACnnnnnnTCCnnnnnnn_nnnnn'
Cuts at: 0 147 179 504
Size: 147 32 325
Fragments arranged by size:
325 147 32
Enzymes that do cut:
AcuI ApoI BanII BbsI BcgI BciVI BglI Bme1580I
BpmI BpuEI BsaXI BseYI BsgI BsmI Bsp1286I BstYI
BtsI CspCI Eco57MI Hin4I MspA1I PvuII SmlI StuI
TstI
Enzymes that do not cut:
AarI AatII AccI Acc65I AclI AfeI AflII AflIII
AgeI AhdI AleI AlfI AloI AlwNI ApaI ApaLI
AscI AseI AsiSI AvaI AvrII BaeI BamHI BanI
BbeI BbvCI BclI BfrBI BglII BlpI BmgBI BmrI
BmtI BplI Bpu10I BsaI BsaAI BsaBI BsaHI BsaWI
BseRI BsiEI BsiHKAI BsiWI BsmBI BspEI BspHI BspMI
BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI
BstEII BstXI BstZ17I Bsu36I BtgI BtgZI ClaI DraI
DraIII DrdI EaeI EagI EarI EciI EcoICRI EcoNI
EcoO109I EcoRI EcoRV FalI FseI FspI FspAI HaeII
HincII HindIII HpaI KasI KpnI MfeI MluI MmeI
MscI MslI NaeI NarI NcoI NdeI NgoMIV NheI
NotI NruI NsiI NspI PacI PasI PciI PflMI
PfoI PmeI PmlI PpiI PpuMI PshAI PsiI PspOMI
PspXI PsrI PstI PvuI RsrII SacI SacII SalI
SanDI SapI SbfI ScaI SexAI SfcI SfiI SfoI
SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI
StyI SwaI TaqII TatI Tth111I XbaI XcmI XhoI
XmaI XmnI ZraI