(Linear) (Six-base) MAPSORT of: KIBB7683.seq Check: 4190 from: 1 to: 1038
KIBB7683.orf
With 182 enzymes: SgfI *
June 26, 2008 10:49 ..
AatII G_ACGT'C
Cuts at: 0 233 1038
Size: 233 805
AccI GT'mk_AC
Cuts at: 0 917 1038
Size: 917 121
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 827 1038
Size: 827 211
AfeI AGC'GCT
Cuts at: 0 817 1038
Size: 817 221
AlwNI CAG_nnn'CTG
Cuts at: 0 304 1038
Size: 304 734
ApaI G_GGCC'C
Cuts at: 0 190 1038
Size: 190 848
ApaLI G'TGCA_C
Cuts at: 0 682 1038
Size: 682 356
ApoI r'AATT_y
Cuts at: 0 105 1038
Size: 105 933
BanII G_rGCy'C
Cuts at: 0 190 791 1038
Size: 190 601 247
Fragments arranged by size:
601 247 190
BbsI GAAGACnn'nnnn_
Cuts at: 0 944 1038
Size: 944 94
BglII A'GATC_T
Cuts at: 0 211 1038
Size: 211 827
Bme1580I G_kGCm'C
Cuts at: 0 190 686 1038
Size: 190 496 352
Fragments arranged by size:
496 352 190
BmgBI CAC'GTC
Cuts at: 0 672 1038
Size: 672 366
BplI GAGnnnnnCTCnnnnnnnn_nnnnn'
Cuts at: 0 991 1038
Size: 991 47
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 141 961 1038
Size: 141 820 77
Fragments arranged by size:
820 141 77
BsaHI Gr'CG_yC
Cuts at: 0 230 1038
Size: 230 808
BsaWI w'CCGG_w
Cuts at: 0 10 1038
Size: 10 1028
BsiHKAI G_wGCw'C
Cuts at: 0 686 1038
Size: 686 352
BsmBI CGTCTCn'nnnn_
Cuts at: 0 37 1038
Size: 37 1001
Bsp1286I G_dGCh'C
Cuts at: 0 190 686 791 1038
Size: 190 496 105 247
Fragments arranged by size:
496 247 190 105
BspEI T'CCGG_A
Cuts at: 0 10 1038
Size: 10 1028
BsrDI GCAATG_nn'
Cuts at: 0 618 1038
Size: 618 420
BsrGI T'GTAC_A
Cuts at: 0 405 1038
Size: 405 633
BstYI r'GATC_y
Cuts at: 0 211 1038
Size: 211 827
BstZ17I GTA'TAC
Cuts at: 0 918 1038
Size: 918 120
EarI CTCTTCn'nnn_
Cuts at: 0 872 1004 1038
Size: 872 132 34
Fragments arranged by size:
872 132 34
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 827 1038
Size: 827 211
EcoNI CCTnn'n_nnAGG
Cuts at: 0 194 1038
Size: 194 844
EcoO109I rG'GnC_Cy
Cuts at: 0 187 1038
Size: 187 851
HaeII r_GCGC'y
Cuts at: 0 819 1038
Size: 819 219
HindIII A'AGCT_T
Cuts at: 0 644 1038
Size: 644 394
MslI CAynn'nnrTG
Cuts at: 0 329 1038
Size: 329 709
PasI CC'CwG_GG
Cuts at: 0 190 383 1038
Size: 190 193 655
Fragments arranged by size:
655 193 190
PfoI T'CCnGG_A
Cuts at: 0 113 273 636 1038
Size: 113 160 363 402
Fragments arranged by size:
402 363 160 113
PspOMI G'GGCC_C
Cuts at: 0 186 1038
Size: 186 852
SfcI C'TryA_G
Cuts at: 0 477 1038
Size: 477 561
SmlI C'TyrA_G
Cuts at: 0 120 976 1038
Size: 120 856 62
Fragments arranged by size:
856 120 62
SspI AAT'ATT
Cuts at: 0 471 1038
Size: 471 567
TatI w'GTAC_w
Cuts at: 0 405 1038
Size: 405 633
TstI CACnnnnnnTCCnnnnnnn_nnnnn'
Cuts at: 0 92 124 1038
Size: 92 32 914
Fragments arranged by size:
914 92 32
XcmI CCAnnnn_n'nnnnTGG
Cuts at: 0 663 1038
Size: 663 375
ZraI GAC'GTC
Cuts at: 0 231 1038
Size: 231 807
Enzymes that do cut:
AatII AccI AcuI AfeI AlwNI ApaI ApaLI ApoI
BanII BbsI BglII Bme1580I BmgBI BplI BpuEI BsaHI
BsaWI BsiHKAI BsmBI Bsp1286I BspEI BsrDI BsrGI BstYI
BstZ17I EarI Eco57MI EcoNI EcoO109I HaeII HindIII MslI
PasI PfoI PspOMI SfcI SmlI SspI TatI TstI
XcmI ZraI
Enzymes that do not cut:
AarI Acc65I AclI AflII AflIII AgeI AhdI AleI
AlfI AloI AscI AseI AsiSI AvaI AvrII BaeI
BamHI BanI BbeI BbvCI BcgI BciVI BclI BfrBI
BglI BlpI BmrI BmtI BpmI Bpu10I BsaI BsaAI
BsaBI BsaXI BseRI BseYI BsgI BsiEI BsiWI BsmI
BspHI BspMI BsrBI BsrFI BssHII BssSI BstAPI BstBI
BstEII BstXI Bsu36I BtgI BtgZI BtsI ClaI CspCI
DraI DraIII DrdI EaeI EagI EciI EcoICRI EcoRI
EcoRV FalI FseI FspI FspAI Hin4I HincII HpaI
KasI KpnI MfeI MluI MmeI MscI MspA1I NaeI
NarI NcoI NdeI NgoMIV NheI NotI NruI NsiI
NspI PacI PciI PflMI PmeI PmlI PpiI PpuMI
PshAI PsiI PspXI PsrI PstI PvuI PvuII RsrII
SacI SacII SalI SanDI SapI SbfI ScaI SexAI
SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI
SrfI StuI StyI SwaI TaqII Tth111I XbaI XhoI
XmaI XmnI