(Linear) (Six-base) MAPSORT of: KIBB6807.seq Check: 7706 from: 1 to: 477
KIBB6807.orf
With 182 enzymes: SgfI *
June 26, 2008 10:48 ..
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 407 455 477
Size: 407 48 22
Fragments arranged by size:
407 48 22
AflII C'TTAA_G
Cuts at: 0 94 477
Size: 94 383
AloI GAACnnnnnnTCCnnnnnnn_nnnnn'
Cuts at: 0 97 129 477
Size: 97 32 348
Fragments arranged by size:
348 97 32
ApaLI G'TGCA_C
Cuts at: 0 197 477
Size: 197 280
BanII G_rGCy'C
Cuts at: 0 347 477
Size: 347 130
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'
Cuts at: 0 268 302 477
Size: 268 34 175
Fragments arranged by size:
268 175 34
Bme1580I G_kGCm'C
Cuts at: 0 201 330 477
Size: 201 129 147
Fragments arranged by size:
201 147 129
Bpu10I CC'TnA_GC
Cuts at: 0 346 434 477
Size: 346 88 43
Fragments arranged by size:
346 88 43
BsaAI yAC'GTr
Cuts at: 0 202 477
Size: 202 275
BsaBI GATnn'nnATC
Cuts at: 0 87 477
Size: 87 390
BseYI C'CCAG_C
Cuts at: 0 417 477
Size: 417 60
BsiEI CG_ry'CG
Cuts at: 0 282 477
Size: 282 195
BsiHKAI G_wGCw'C
Cuts at: 0 201 324 477
Size: 201 123 153
Fragments arranged by size:
201 153 123
Bsp1286I G_dGCh'C
Cuts at: 0 201 324 330 347 477
Size: 201 123 6 17 130
Fragments arranged by size:
201 130 123 17 6
BsrDI GCAATG_nn'
Cuts at: 0 293 477
Size: 293 184
BsrFI r'CCGG_y
Cuts at: 0 356 477
Size: 356 121
BssSI C'ACGA_G
Cuts at: 0 323 477
Size: 323 154
BstYI r'GATC_y
Cuts at: 0 251 477
Size: 251 226
Bsu36I CC'TnA_GG
Cuts at: 0 118 477
Size: 118 359
EaeI y'GGCC_r
Cuts at: 0 2 358 477
Size: 2 356 119
Fragments arranged by size:
356 119 2
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 407 455 477
Size: 407 48 22
Fragments arranged by size:
407 48 22
EcoO109I rG'GnC_Cy
Cuts at: 0 156 219 456 477
Size: 156 63 237 21
Fragments arranged by size:
237 156 63 21
HindIII A'AGCT_T
Cuts at: 0 307 477
Size: 307 170
MscI TGG'CCA
Cuts at: 0 4 477
Size: 4 473
MslI CAynn'nnrTG
Cuts at: 0 53 477
Size: 53 424
NaeI GCC'GGC
Cuts at: 0 358 477
Size: 358 119
NgoMIV G'CCGG_C
Cuts at: 0 356 477
Size: 356 121
NspI r_CATG'y
Cuts at: 0 129 477
Size: 129 348
PmlI CAC'GTG
Cuts at: 0 202 477
Size: 202 275
PstI C_TGCA'G
Cuts at: 0 414 477
Size: 414 63
PvuI CG_AT'CG
Cuts at: 0 282 477
Size: 282 195
SfcI C'TryA_G
Cuts at: 0 410 477
Size: 410 67
SmlI C'TyrA_G
Cuts at: 0 94 477
Size: 94 383
StyI C'CwwG_G
Cuts at: 0 185 233 338 368 374 380 386 398
Size: 185 48 105 30 6 6 6 12
Cuts at: 398 477
Size: 79
Fragments arranged by size:
185 105 79 48 30 12 6 6
6
TstI CACnnnnnnTCCnnnnnnn_nnnnn'
Cuts at: 0 19 51 477
Size: 19 32 426
Fragments arranged by size:
426 32 19
XcmI CCAnnnn_n'nnnnTGG
Cuts at: 0 307 477
Size: 307 170
Enzymes that do cut:
AcuI AflII AloI ApaLI BanII BcgI Bme1580I Bpu10I
BsaAI BsaBI BseYI BsiEI BsiHKAI Bsp1286I BsrDI BsrFI
BssSI BstYI Bsu36I EaeI Eco57MI EcoO109I HindIII MscI
MslI NaeI NgoMIV NspI PmlI PstI PvuI SfcI
SmlI StyI TstI XcmI
Enzymes that do not cut:
AarI AatII AccI Acc65I AclI AfeI AflIII AgeI
AhdI AleI AlfI AlwNI ApaI ApoI AscI AseI
AsiSI AvaI AvrII BaeI BamHI BanI BbeI BbsI
BbvCI BciVI BclI BfrBI BglI BglII BlpI BmgBI
BmrI BmtI BplI BpmI BpuEI BsaI BsaHI BsaWI
BsaXI BseRI BsgI BsiWI BsmI BsmBI BspEI BspHI
BspMI BsrBI BsrGI BssHII BstAPI BstBI BstEII BstXI
BstZ17I BtgI BtgZI BtsI ClaI CspCI DraI DraIII
DrdI EagI EarI EciI EcoICRI EcoNI EcoRI EcoRV
FalI FseI FspI FspAI HaeII Hin4I HincII HpaI
KasI KpnI MfeI MluI MmeI MspA1I NarI NcoI
NdeI NheI NotI NruI NsiI PacI PasI PciI
PflMI PfoI PmeI PpiI PpuMI PshAI PsiI PspOMI
PspXI PsrI PvuII RsrII SacI SacII SalI SanDI
SapI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI
SmaI SnaBI SpeI SphI SrfI SspI StuI SwaI
TaqII TatI Tth111I XbaI XhoI XmaI XmnI ZraI