(Linear) (Six-base) MAPSORT of: KIAA0276.seq  Check: 7347  from: 1  to: 876



KIAA0276.orf

 With 182 enzymes: SgfI * 

                        October 24, 2006 15:12  ..

AccI GT'mk_AC

Cuts at:      0     240     876 
   Size:        240     636
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     143     308     386     876 
   Size:        143     165      78     490

  Fragments arranged by size: 

                 490     165     143      78
 
AflII C'TTAA_G

Cuts at:      0     546     876 
   Size:        546     330
 
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:      0      26     876 
   Size:         26     850
 
AlwNI CAG_nnn'CTG

Cuts at:      0     346     876 
   Size:        346     530
 
ApoI r'AATT_y

Cuts at:      0     379     876 
   Size:        379     497
 
AseI AT'TA_AT

Cuts at:      0     740     785     876 
   Size:        740      45      91

  Fragments arranged by size: 

                 740      91      45
 
BbsI GAAGACnn'nnnn_

Cuts at:      0     113     207     395     876 
   Size:        113      94     188     481

  Fragments arranged by size: 

                 481     188     113      94
 
BbvCI CC'TCA_GC

Cuts at:      0     796     876 
   Size:        796      80
 
BglI GCCn_nnn'nGGC

Cuts at:      0     368     876 
   Size:        368     508
 
BglII A'GATC_T

Cuts at:      0      71     876 
   Size:         71     805
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     233     876 
   Size:        233     643
 
Bpu10I CC'TnA_GC

Cuts at:      0     796     876 
   Size:        796      80
 
BspMI ACCTGCnnnn'nnnn_

Cuts at:      0     213     876 
   Size:        213     663
 
BsrDI GCAATG_nn'

Cuts at:      0     765     876 
   Size:        765     111
 
BstYI r'GATC_y

Cuts at:      0      71     876 
   Size:         71     805
 
BtsI GCAGTG_nn'

Cuts at:      0     644     876 
   Size:        644     232
 
DraI TTT'AAA

Cuts at:      0     579     876 
   Size:        579     297
 
EaeI y'GGCC_r

Cuts at:      0     114     823     876 
   Size:        114     709      53

  Fragments arranged by size: 

                 709     114      53
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     143     233     308     386     876 
   Size:        143      90      75      78     490

  Fragments arranged by size: 

                 490     143      90      78      75
 
EcoO109I rG'GnC_Cy

Cuts at:      0     361     876 
   Size:        361     515
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:      0     208     240     876 
   Size:        208      32     636

  Fragments arranged by size: 

                 636     208      32
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:      0     815     876 
   Size:        815      61
 
MscI TGG'CCA

Cuts at:      0     116     825     876 
   Size:        116     709      51

  Fragments arranged by size: 

                 709     116      51
 
MslI CAynn'nnrTG

Cuts at:      0       8     876 
   Size:          8     868
 
MspA1I CmG'CkG

Cuts at:      0      19      33     876 
   Size:         19      14     843

  Fragments arranged by size: 

                 843      19      14
 
NspI r_CATG'y

Cuts at:      0     255     660     876 
   Size:        255     405     216

  Fragments arranged by size: 

                 405     255     216
 
PvuII CAG'CTG

Cuts at:      0      33     876 
   Size:         33     843
 
SfcI C'TryA_G

Cuts at:      0     472     876 
   Size:        472     404
 
SmlI C'TyrA_G

Cuts at:      0     546     876 
   Size:        546     330
 
SspI AAT'ATT

Cuts at:      0      63     876 
   Size:         63     813
 
StyI C'CwwG_G

Cuts at:      0     187     876 
   Size:        187     689
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:      0     657     876 
   Size:        657     219
 
XmnI GAAnn'nnTTC

Cuts at:      0     495     876 
   Size:        495     381
 

 Enzymes that do cut:

     AccI     AcuI    AflII     AlfI    AlwNI     ApoI     AseI     BbsI
    BbvCI     BglI    BglII     BpmI   Bpu10I    BspMI    BsrDI    BstYI
     BtsI     DraI     EaeI  Eco57MI EcoO109I    Hin4I     MmeI     MscI
     MslI   MspA1I     NspI    PvuII     SfcI     SmlI     SspI     StyI
     XcmI     XmnI

 Enzymes that do not cut: 

     AarI    AatII   Acc65I     AclI     AfeI   AflIII     AgeI     AhdI
     AleI     AloI     ApaI    ApaLI     AscI    AsiSI     AvaI    AvrII
     BaeI    BamHI     BanI    BanII     BbeI     BcgI    BciVI     BclI
    BfrBI     BlpI Bme1580I    BmgBI     BmrI     BmtI     BplI    BpuEI
     BsaI    BsaAI    BsaBI    BsaHI    BsaWI    BsaXI    BseRI    BseYI
     BsgI    BsiEI  BsiHKAI    BsiWI     BsmI    BsmBI Bsp1286I    BspEI
    BspHI    BsrBI    BsrFI    BsrGI   BssHII    BssSI   BstAPI    BstBI
   BstEII    BstXI  BstZ17I   Bsu36I     BtgI    BtgZI     ClaI    CspCI
   DraIII     DrdI     EagI     EarI     EciI  EcoICRI    EcoNI    EcoRI
    EcoRV     FalI     FseI     FspI    FspAI    HaeII   HincII  HindIII
     HpaI     KasI     KpnI     MfeI     MluI     NaeI     NarI     NcoI
     NdeI   NgoMIV     NheI     NotI     NruI     NsiI     PacI     PasI
     PciI    PflMI     PfoI     PmeI     PmlI     PpiI    PpuMI    PshAI
     PsiI   PspOMI    PspXI     PsrI     PstI     PvuI    RsrII     SacI
    SacII     SalI    SanDI     SapI     SbfI     ScaI    SexAI     SfiI
     SfoI     SgfI    SgrAI     SmaI    SnaBI     SpeI     SphI     SrfI
     StuI     SwaI    TaqII     TatI     TstI  Tth111I     XbaI     XhoI
     XmaI     ZraI