PACSIN2 ORF clone FHC06261

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC06261

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Clone info.

Species

human

Clone Name

pFN21AB8651 Sequence (with vector) Restriction Map

Product ID

FHC06261

Flexi Clone PID

FXC06261

ORF Sequence

DNA sequence (1458 bp)
Protein sequence (486 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587486]

Gene

KIBB8651

Symbol

PACSIN2

Alias : SDPII

Description

protein kinase C and casein kinase substrate in neurons 2, transcript variant 2

Original Clone ID

oc00308

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1458 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 486 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43023.1 2.3e-109 100.0 PACSIN2 CCDS54536.1 7.7e-77 91.6 PACSIN2 CCDS4793.1 4.3e-54 64.1 PACSIN1 CCDS31481.1 3.3e-44 51.8 PACSIN3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001452 429 439 PR00452 Src homology-3 domain IPR001452 443 458 PR00452 Src homology-3 domain IPR001452 473 485 PR00452 Src homology-3 domain HMMPfam IPR001060 16 103 PF00611 Fps/Fes/Fer/CIP4 homology IPR001452 432 479 PF00018 Src homology-3 domain HMMSmart IPR001060 16 104 SM00055 Fps/Fes/Fer/CIP4 homology IPR001452 429 486 SM00326 Src homology-3 domain ProfileScan IPR001060 11 75 PS50133 Fps/Fes/Fer/CIP4 homology IPR001452 426 486 PS50002 Src homology-3 domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001171899 486 604960 100.0 100.0 NP_009160 486 604960 100.0 100.0 XP_016884053 486 604960 100.0 100.0 XP_011528151 488 604960 99.6 100.0 XP_011528153 488 604960 99.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8651 Download

>KIBB8651  1458 bp
ATGTCTGTCACATATGATGATTCCGTTGGAGTAGAAGTGTCCAGCGACAGCTTCTGGGAG
GTCGGGAACTACAAGCGGACTGTGAAGCGGATCGACGATGGCCACCGCCTGTGCAGCGAC
CTCATGAACTGCCTGCATGAGCGGGCGCGCATCGAGAAGGCGTATGCGCAGCAGCTCACT
GAGTGGGCCCGGCGCTGGAGGCAGCTCGTGGAGAAAGGGCCCCAGTACGGGACCGTGGAG
AAGGCCTGGATGGCCTTCATGTCCGAGGCAGAGAGGGTGAGCGAGCTGCACCTCGAGGTG
AAGGCCTCACTGATGAACGATGACTTCGAGAAGATCAAGAACTGGCAGAAGGAAGCCTTT
CACAAGCAGATGATGGGCGGCTTCAAGGAGACCAAGGAAGCTGAGGACGGCTTTCGGAAG
GCACAGAAGCCCTGGGCCAAGAAGCTGAAAGAGGTAGAAGCAGCAAAGAAAGCCCACCAT
GCAGCGTGCAAAGAGGAGAAGCTGGCTATCTCACGAGAAGCCAACAGCAAGGCAGACCCA
TCCCTCAACCCTGAACAGCTCAAGAAATTGCAAGACAAAATAGAAAAGTGCAAGCAAGAT
GTTCTTAAGACCAAAGAGAAGTATGAGAAGTCCCTGAAGGAACTCGACCAGGGCACACCC
CAGTACATGGAGAACATGGAGCAGGTGTTTGAGCAGTGCCAGCAGTTCGAGGAGAAACGC
CTTCGCTTCTTCCGGGAGGTTCTGCTGGAGGTTCAGAAGCACCTAGACCTGTCCAATGTG
GCTGGCTACAAAGCCATTTACCATGACCTGGAGCAGAGCATCAGAGCAGCTGATGCAGTG
GAGGACCTGAGGTGGTTCCGAGCCAATCACGGGCCGGGCATGGCCATGAACTGGCCGCAG
TTTGAGGAGTGGTCCGCAGACCTGAATCGAACCCTCAGCCGGAGAGAGAAGAAGAAGGCC
ACTGACGGCGTCACCCTGACGGGCATCAACCAGACAGGCGACCAGTCTCTGCCGAGTAAG
CCCAGCAGCACCCTTAATGTCCCGAGCAACCCCGCCCAGTCTGCGCAGTCACAGTCCAGC
TACAACCCCTTCGAGGATGAGGACGACACGGGCAGCACCGTCAGTGAGAAGGACGACACT
AAGGCCAAAAATGTGAGCAGCTACGAGAAGACCCAGAGCTATCCCACCGACTGGTCAGAC
GATGAGTCTAACAACCCCTTCTCCTCCACGGATGCCAATGGGGACTCGAATCCATTCGAC
GACGACGCCACCTCGGGGACGGAAGTGCGAGTCCGGGCCCTGTATGACTATGAGGGGCAG
GAGCATGATGAGCTGAGCTTCAAGGCTGGGGATGAGCTGACCAAGATGGAGGACGAGGAT
GAGCAGGGCTGGTGCAAGGGACGCTTGGACAACGGGCAAGTTGGCCTATACCCGGCAAAT
TATGTGGAGGCGATCCAG

ORF Protein

Cloned ORF protein sequence for pFN21AB8651 Download

>KIBB8651  486 aa
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLT
EWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAF
HKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADP
SLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQFEEKR
LRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQSIRAADAVEDLRWFRANHGPGMAMNWPQ
FEEWSADLNRTLSRREKKKATDGVTLTGINQTGDQSLPSKPSSTLNVPSNPAQSAQSQSS
YNPFEDEDDTGSTVSEKDDTKAKNVSSYEKTQSYPTDWSDDESNNPFSSTDANGDSNPFD
DDATSGTEVRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPAN
YVEAIQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8651 Download

>pFN21AB8651  6163 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCTGTCACATATGATGATTCCGTTGGAGTAGA
AGTGTCCAGCGACAGCTTCTGGGAGGTCGGGAACTACAAGCGGACTGTGAAGCGGATCGA
CGATGGCCACCGCCTGTGCAGCGACCTCATGAACTGCCTGCATGAGCGGGCGCGCATCGA
GAAGGCGTATGCGCAGCAGCTCACTGAGTGGGCCCGGCGCTGGAGGCAGCTCGTGGAGAA
AGGGCCCCAGTACGGGACCGTGGAGAAGGCCTGGATGGCCTTCATGTCCGAGGCAGAGAG
GGTGAGCGAGCTGCACCTCGAGGTGAAGGCCTCACTGATGAACGATGACTTCGAGAAGAT
CAAGAACTGGCAGAAGGAAGCCTTTCACAAGCAGATGATGGGCGGCTTCAAGGAGACCAA
GGAAGCTGAGGACGGCTTTCGGAAGGCACAGAAGCCCTGGGCCAAGAAGCTGAAAGAGGT
AGAAGCAGCAAAGAAAGCCCACCATGCAGCGTGCAAAGAGGAGAAGCTGGCTATCTCACG
AGAAGCCAACAGCAAGGCAGACCCATCCCTCAACCCTGAACAGCTCAAGAAATTGCAAGA
CAAAATAGAAAAGTGCAAGCAAGATGTTCTTAAGACCAAAGAGAAGTATGAGAAGTCCCT
GAAGGAACTCGACCAGGGCACACCCCAGTACATGGAGAACATGGAGCAGGTGTTTGAGCA
GTGCCAGCAGTTCGAGGAGAAACGCCTTCGCTTCTTCCGGGAGGTTCTGCTGGAGGTTCA
GAAGCACCTAGACCTGTCCAATGTGGCTGGCTACAAAGCCATTTACCATGACCTGGAGCA
GAGCATCAGAGCAGCTGATGCAGTGGAGGACCTGAGGTGGTTCCGAGCCAATCACGGGCC
GGGCATGGCCATGAACTGGCCGCAGTTTGAGGAGTGGTCCGCAGACCTGAATCGAACCCT
CAGCCGGAGAGAGAAGAAGAAGGCCACTGACGGCGTCACCCTGACGGGCATCAACCAGAC
AGGCGACCAGTCTCTGCCGAGTAAGCCCAGCAGCACCCTTAATGTCCCGAGCAACCCCGC
CCAGTCTGCGCAGTCACAGTCCAGCTACAACCCCTTCGAGGATGAGGACGACACGGGCAG
CACCGTCAGTGAGAAGGACGACACTAAGGCCAAAAATGTGAGCAGCTACGAGAAGACCCA
GAGCTATCCCACCGACTGGTCAGACGATGAGTCTAACAACCCCTTCTCCTCCACGGATGC
CAATGGGGACTCGAATCCATTCGACGACGACGCCACCTCGGGGACGGAAGTGCGAGTCCG
GGCCCTGTATGACTATGAGGGGCAGGAGCATGATGAGCTGAGCTTCAAGGCTGGGGATGA
GCTGACCAAGATGGAGGACGAGGATGAGCAGGGCTGGTGCAAGGGACGCTTGGACAACGG
GCAAGTTGGCCTATACCCGGCAAATTATGTGGAGGCGATCCAGGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT