VPS9D1 ORF clone FHC04330

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC04330

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Clone info.

Species

human

Clone Name

pFN21AE0355 Sequence (with vector) Restriction Map

Product ID

FHC04330

Flexi Clone PID

FXC04330

ORF Sequence

DNA sequence (1893 bp)
Protein sequence (631 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527115]

Gene

KIEE0355

Symbol

VPS9D1

Alias : ATP-BL, ATPBL, C16orf7

Description

VPS9 domain containing 1

Original Clone ID

oc01055

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1893 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 631 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS42220.1 3.2e-127 100.0 VPS9D1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003123 511 623 PF02204 Vacuolar sorting protein 9 HMMSmart IPR013995 508 630 SM00167 Vacuolar sorting protein 9 ProfileScan IPR003123 467 630 PS51205 Vacuolar sorting protein 9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0355 Download

>KIEE0355  1893 bp
ATGGCCGCTGCGGCCGGGGACGGCACGGTGAAGCCGCTGCAGAGCGCCATGAAGCTTGCC
AACGGGGCCATCGAGCTGGACACCGGCAACCGGCCCCGGGAGGCATACACGGAATACCTG
AGGAGCATCCACTATATCTCCCAGGTGTTACTAGAAGAAGTGGAAACCACTAAAGAAGCT
GGGGAAACTGTGCCCCCCGACACCTCCAAGATGCTGAAGCTAGCACAGCAGTGTCTGGAG
AGGGCCCAGTCGACGGCCGCCAAGCTTGGGAAAACACGCCTGAAGCCAACCATGCCTGCA
GCTGCTCCCATTCCCCAGCCTGCCGGCCGACACCGCCGTGTATACTCCGATGAAGGAGGA
AAGCTCTCTCCTTTTCTGCCACCCGAGATCTTCCAGAAGCTTCAGGGGGCAGAGTCACAA
AGCTGTAAGAAAGAGCTGACGCCACTGGAGGAGGCCTCCCTGCAGAATCAGAAGCTGAAG
GCTGCGTATGAGGCCCGAATGGCGCGGCTAGACCCCAGCCAGGCCATGCAGAAGACATCC
CTGACCCTCTCTCTACAGCGGCAGATGATGGAGAACCTAGTGATTGCCAAAGCCCGGGAG
GAGACACTCCAGAGAAAGATGGAGGAGCGCCGGCTGCGGCTCCAGGAGGCCGCCAACAGG
AGGTTTTGCAGCCAAGTCGCCCTGACCCCGGAGGAACGGGAGCAGCGGGCCCTTTACGCC
GCCATCCTGGAGTACGAACAGGACCATGACTGGCCGAAGCACTGGAAGGCCAAGCTCAAG
AGGAATCCGGGGGACCTGTCACTCGTGACCAGCCTGGTCTCACACCTGCTCAGCCTCCCC
GACCACCCGATCGCGCAGCTCCTGAGGCGGCTGCAGTGCTCCGTGTACAGCGCCCTGTAT
CCCGCCGTGAGCAGAGCAGCCGCGCCAGCCCCAGGCTGCTGCCCCCCGACCCCCAACCCC
GGAAGCCGACGGCTGCGGCCCTCGCAGAGCCTCCATTGCATGCTGTCCCCGCCCGAGCCC
AGCGCAGCCCCGCGGCCCCAGGACAGTCCCCCCACGCCCCCACTCCAACCCGGCCCCGTG
GGGTCTCCCTCACCCCTGGGGGACACCGCATCTGGATTGCCAGACAAGGACAGCTCGTTC
GAGGACCTGGAGCAGTTCCTGGGGACGTCTGAGCGGCAGGGCCGGGGCCGTGGGGTACAG
CCGGAGCCCCAGCTGCAGCAGCTGAAGACCGCGGTGGAGGAGATCCACAATGCCGTAGAC
AGGCTGCTCTCGCTGACCCTTCTGGCCTTCGAAGGCCTAAACACAGCTGCCTCCAAGGAC
CGCTGCCTGGCCTGCATTGAGGAACCCTTTTTCTCCCCGCTGTGGCCTCTGCTGCTGGCC
CTGTACAGGAGCGTGCACCGAGCCCGGGAGGCTGCCCTGAGCAGGAGCATGGAGCTCTAC
AGGAATGCACCCCCCACCGCCATTGGCATCCCCACCAAGCTCCTCCCCCAGAACCCTGAG
GCCAAGGGGGCCACTGGCTACCCCTACTGCGCGGCGGCCCAGGAGCTCGGACTGCTGGTC
CTGGAGAGCTGCCCCCAGAAGAAGCTGGAGTGCATAGTGCGGACCCTGCGGATCATCTGT
GTCTGTGCGGAAGACTACTGCCCCACCCCAGAGGCCACACCCCAGGCCGGGCCCCCGCCC
ATCGCTGCAGCTGCCATTGGTGCCGATGACCTGCTGCCCATCCTGTCCTTCGTGGTGCTG
AGGAGCGGCCTCCCTCAGCTGGTGTCGGAGTGCGCGGCCCTGGAGGAGTTCATCCACGAG
GGGTACCTGATCGGAGAGGAGGGCTACTGCCTCACATCACTGCAGAGTGCCCTGAGCTAC
GTGGAGCTGCTGCCCCGGGGAGGCCTGGCCAAG

ORF Protein

Cloned ORF protein sequence for pFN21AE0355 Download

>KIEE0355  631 aa
MAAAAGDGTVKPLQSAMKLANGAIELDTGNRPREAYTEYLRSIHYISQVLLEEVETTKEA
GETVPPDTSKMLKLAQQCLERAQSTAAKLGKTRLKPTMPAAAPIPQPAGRHRRVYSDEGG
KLSPFLPPEIFQKLQGAESQSCKKELTPLEEASLQNQKLKAAYEARMARLDPSQAMQKTS
LTLSLQRQMMENLVIAKAREETLQRKMEERRLRLQEAANRRFCSQVALTPEEREQRALYA
AILEYEQDHDWPKHWKAKLKRNPGDLSLVTSLVSHLLSLPDHPIAQLLRRLQCSVYSALY
PAVSRAAAPAPGCCPPTPNPGSRRLRPSQSLHCMLSPPEPSAAPRPQDSPPTPPLQPGPV
GSPSPLGDTASGLPDKDSSFEDLEQFLGTSERQGRGRGVQPEPQLQQLKTAVEEIHNAVD
RLLSLTLLAFEGLNTAASKDRCLACIEEPFFSPLWPLLLALYRSVHRAREAALSRSMELY
RNAPPTAIGIPTKLLPQNPEAKGATGYPYCAAAQELGLLVLESCPQKKLECIVRTLRIIC
VCAEDYCPTPEATPQAGPPPIAAAAIGADDLLPILSFVVLRSGLPQLVSECAALEEFIHE
GYLIGEEGYCLTSLQSALSYVELLPRGGLAK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0355 Download

>pFN21AE0355  6598 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCGCTGCGGCCGGGGACGGCACGGTGAAGCC
GCTGCAGAGCGCCATGAAGCTTGCCAACGGGGCCATCGAGCTGGACACCGGCAACCGGCC
CCGGGAGGCATACACGGAATACCTGAGGAGCATCCACTATATCTCCCAGGTGTTACTAGA
AGAAGTGGAAACCACTAAAGAAGCTGGGGAAACTGTGCCCCCCGACACCTCCAAGATGCT
GAAGCTAGCACAGCAGTGTCTGGAGAGGGCCCAGTCGACGGCCGCCAAGCTTGGGAAAAC
ACGCCTGAAGCCAACCATGCCTGCAGCTGCTCCCATTCCCCAGCCTGCCGGCCGACACCG
CCGTGTATACTCCGATGAAGGAGGAAAGCTCTCTCCTTTTCTGCCACCCGAGATCTTCCA
GAAGCTTCAGGGGGCAGAGTCACAAAGCTGTAAGAAAGAGCTGACGCCACTGGAGGAGGC
CTCCCTGCAGAATCAGAAGCTGAAGGCTGCGTATGAGGCCCGAATGGCGCGGCTAGACCC
CAGCCAGGCCATGCAGAAGACATCCCTGACCCTCTCTCTACAGCGGCAGATGATGGAGAA
CCTAGTGATTGCCAAAGCCCGGGAGGAGACACTCCAGAGAAAGATGGAGGAGCGCCGGCT
GCGGCTCCAGGAGGCCGCCAACAGGAGGTTTTGCAGCCAAGTCGCCCTGACCCCGGAGGA
ACGGGAGCAGCGGGCCCTTTACGCCGCCATCCTGGAGTACGAACAGGACCATGACTGGCC
GAAGCACTGGAAGGCCAAGCTCAAGAGGAATCCGGGGGACCTGTCACTCGTGACCAGCCT
GGTCTCACACCTGCTCAGCCTCCCCGACCACCCGATCGCGCAGCTCCTGAGGCGGCTGCA
GTGCTCCGTGTACAGCGCCCTGTATCCCGCCGTGAGCAGAGCAGCCGCGCCAGCCCCAGG
CTGCTGCCCCCCGACCCCCAACCCCGGAAGCCGACGGCTGCGGCCCTCGCAGAGCCTCCA
TTGCATGCTGTCCCCGCCCGAGCCCAGCGCAGCCCCGCGGCCCCAGGACAGTCCCCCCAC
GCCCCCACTCCAACCCGGCCCCGTGGGGTCTCCCTCACCCCTGGGGGACACCGCATCTGG
ATTGCCAGACAAGGACAGCTCGTTCGAGGACCTGGAGCAGTTCCTGGGGACGTCTGAGCG
GCAGGGCCGGGGCCGTGGGGTACAGCCGGAGCCCCAGCTGCAGCAGCTGAAGACCGCGGT
GGAGGAGATCCACAATGCCGTAGACAGGCTGCTCTCGCTGACCCTTCTGGCCTTCGAAGG
CCTAAACACAGCTGCCTCCAAGGACCGCTGCCTGGCCTGCATTGAGGAACCCTTTTTCTC
CCCGCTGTGGCCTCTGCTGCTGGCCCTGTACAGGAGCGTGCACCGAGCCCGGGAGGCTGC
CCTGAGCAGGAGCATGGAGCTCTACAGGAATGCACCCCCCACCGCCATTGGCATCCCCAC
CAAGCTCCTCCCCCAGAACCCTGAGGCCAAGGGGGCCACTGGCTACCCCTACTGCGCGGC
GGCCCAGGAGCTCGGACTGCTGGTCCTGGAGAGCTGCCCCCAGAAGAAGCTGGAGTGCAT
AGTGCGGACCCTGCGGATCATCTGTGTCTGTGCGGAAGACTACTGCCCCACCCCAGAGGC
CACACCCCAGGCCGGGCCCCCGCCCATCGCTGCAGCTGCCATTGGTGCCGATGACCTGCT
GCCCATCCTGTCCTTCGTGGTGCTGAGGAGCGGCCTCCCTCAGCTGGTGTCGGAGTGCGC
GGCCCTGGAGGAGTTCATCCACGAGGGGTACCTGATCGGAGAGGAGGGCTACTGCCTCAC
ATCACTGCAGAGTGCCCTGAGCTACGTGGAGCTGCTGCCCCGGGGAGGCCTGGCCAAGGT
TTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAG
CTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGC
AATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGAT
GAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT
GATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAAT
TGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAA
AACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCC
CTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTG
GCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGA
ACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAA
CCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGT
GTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG
CTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTG
GATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATG
AGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAG
CAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACA
GAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATG
AGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTG
AATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACG
TTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGAC
TGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGG
TTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTG
GGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACT
ATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
TTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATAC
GGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAA
AGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAA
GATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGC
TTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCAC
GCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAAC
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG
TAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGT
ATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGA
CAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCT
CTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGA
TTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACG
CTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCT
TCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTG
GGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTG
TACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGT
TTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTT
TTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCC
ATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT