LHX2 ORF clone FHC03882

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03882

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Clone info.

Species

human

Clone Name

pFN21AB7676 Sequence (with vector) Restriction Map

Product ID

FHC03882

Flexi Clone PID

FXC03882

ORF Sequence

DNA sequence (1218 bp)
Protein sequence (406 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527955]

Gene

KIBB7676

Symbol

LHX2

Alias : LH2, hLhx2

Description

LIM homeobox 2

Original Clone ID

cs00176

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1218 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 406 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6853.1 5e-100 100.0 LHX2 CCDS30962.1 2.6e-34 70.3 LHX9 CCDS1393.1 2.6e-34 70.3 LHX9 CCDS10290.1 1.6e-12 35.9 ISL2 CCDS6995.1 1.7e-12 28.6 LHX3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001781 53 110 PF00412 Zinc finger IPR001781 115 170 PF00412 Zinc finger IPR001356 267 323 PF00046 Homeobox HMMSmart IPR001781 52 105 SM00132 Zinc finger IPR001781 114 168 SM00132 Zinc finger IPR001356 266 328 SM00389 Homeobox ProfileScan IPR001781 51 112 PS50023 Zinc finger IPR001781 113 175 PS50023 Zinc finger IPR001356 264 324 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004780 406 603759 100.0 100.0 XP_016857338 378 606066 70.3 100.0 NP_001014434 388 606066 70.3 100.0 NP_064589 397 606066 70.3 100.0 XP_011508083 403 606066 70.3 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7676 Download

>KIBB7676  1218 bp
ATGCTGTTCCACAGTCTGTCGGGCCCCGAGGTGCACGGGGTCATCGACGAGATGGACCGC
AGGGCCAAGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACCGCGGCGACACCGAGACG
ACCATGCCGTCCATCAGCAGTGACCGCGCCGCGCTGTGCGCCGGCTGCGGGGGCAAGATC
TCGGACCGCTACTACCTGCTGGCGGTGGACAAGCAGTGGCACATGCGCTGCCTCAAGTGC
TGCGAGTGCAAGCTCAACCTGGAGTCGGAGCTCACCTGTTTCAGCAAGGACGGTAGCATC
TACTGCAAGGAAGACTACTACAGGCGCTTCTCTGTGCAGCGCTGCGCCCGCTGCCACCTG
GGCATCTCGGCCTCGGAGATGGTGATGCGCGCTCGGGACTTGGTTTATCACCTCAACTGC
TTCACGTGCACCACGTGTAACAAGATGCTGACCACGGGCGACCACTTCGGCATGAAGGAC
AGCCTGGTCTACTGCCGCTTGCACTTCGAGGCGCTGCTGCAGGGCGAGTACCCCGCACAC
TTCAACCATGCCGACGTGGCAGCGGCGGCCGCTGCAGCCGCGGCGGCCAAGAGCGCGGGG
CTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCCCTACTACAATGGCGTGGGCACTGTG
CAGAAGGGGCGGCCGAGGAAACGTAAGAGCCCGGGCCCCGGTGCGGATCTGGCGGCCTAC
AACGCTGCGCTAAGCTGCAACGAAAACGACGCAGAGCACCTGGACCGTGACCAGCCATAC
CCGAGCAGCCAGAAGACCAAGCGCATGCGCACGTCCTTCAAGCACCACCAGCTTCGGACC
ATGAAGTCTTACTTTGCCATTAACCACAACCCCGACGCCAAGGACTTGAAGCAGCTCGCG
CAAAAGACGGGCCTCACCAAGCGGGTCCTCCAGGTCTGGTTCCAGAACGCCCGAGCCAAG
TTCAGGCGCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCG
CTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAGCTCTCCAACGCCTCGCTCAGCCCC
TCCAGCACGCCCACCACCCTGACAGACTTGACTAGCCCCACCCTGCCAACTGTGACGTCC
GTCTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATGAGCCTCACAGCCCCTCACAAACG
ACTCTTACCAACCTTTTC

ORF Protein

Cloned ORF protein sequence for pFN21AB7676 Download

>KIBB7676  406 aa
MLFHSLSGPEVHGVIDEMDRRAKSEAPAISSAIDRGDTETTMPSISSDRAALCAGCGGKI
SDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHL
GISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALLQGEYPAH
FNHADVAAAAAAAAAAKSAGLGAAGANPLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAY
NAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLA
QKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKSTDAALQTGTPSGPASELSNASLSP
SSTPTTLTDLTSPTLPTVTSVLTSVPGNLEGHEPHSPSQTTLTNLF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7676 Download

>pFN21AB7676  5923 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGTTCCACAGTCTGTCGGGCCCCGAGGTGCA
CGGGGTCATCGACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCGCCATCAGCTCCGC
CATCGACCGCGGCGACACCGAGACGACCATGCCGTCCATCAGCAGTGACCGCGCCGCGCT
GTGCGCCGGCTGCGGGGGCAAGATCTCGGACCGCTACTACCTGCTGGCGGTGGACAAGCA
GTGGCACATGCGCTGCCTCAAGTGCTGCGAGTGCAAGCTCAACCTGGAGTCGGAGCTCAC
CTGTTTCAGCAAGGACGGTAGCATCTACTGCAAGGAAGACTACTACAGGCGCTTCTCTGT
GCAGCGCTGCGCCCGCTGCCACCTGGGCATCTCGGCCTCGGAGATGGTGATGCGCGCTCG
GGACTTGGTTTATCACCTCAACTGCTTCACGTGCACCACGTGTAACAAGATGCTGACCAC
GGGCGACCACTTCGGCATGAAGGACAGCCTGGTCTACTGCCGCTTGCACTTCGAGGCGCT
GCTGCAGGGCGAGTACCCCGCACACTTCAACCATGCCGACGTGGCAGCGGCGGCCGCTGC
AGCCGCGGCGGCCAAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCC
CTACTACAATGGCGTGGGCACTGTGCAGAAGGGGCGGCCGAGGAAACGTAAGAGCCCGGG
CCCCGGTGCGGATCTGGCGGCCTACAACGCTGCGCTAAGCTGCAACGAAAACGACGCAGA
GCACCTGGACCGTGACCAGCCATACCCGAGCAGCCAGAAGACCAAGCGCATGCGCACGTC
CTTCAAGCACCACCAGCTTCGGACCATGAAGTCTTACTTTGCCATTAACCACAACCCCGA
CGCCAAGGACTTGAAGCAGCTCGCGCAAAAGACGGGCCTCACCAAGCGGGTCCTCCAGGT
CTGGTTCCAGAACGCCCGAGCCAAGTTCAGGCGCAACCTCTTACGGCAGGAAAACACGGG
CGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGA
GCTCTCCAACGCCTCGCTCAGCCCCTCCAGCACGCCCACCACCCTGACAGACTTGACTAG
CCCCACCCTGCCAACTGTGACGTCCGTCTTAACTTCTGTGCCTGGCAACCTGGAGGGCCA
TGAGCCTCACAGCCCCTCACAAACGACTCTTACCAACCTTTTCGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT