ARMCX1 ORF clone FHC03052

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03052

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Clone info.

Species

human

Clone Name

pFN21AB8833 Sequence (with vector) Restriction Map

Product ID

FHC03052

Flexi Clone PID

FXC03052

ORF Sequence

DNA sequence (1359 bp)
Protein sequence (453 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464460]

Gene

KIBB8833

Symbol

ARMCX1

Alias : ALEX1, GASP7

Description

armadillo repeat containing, X-linked 1

Original Clone ID

cp00868

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1359 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 453 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14487.1 2e-146 100.0 ARMCX1 CCDS14489.1 1.2e-45 42.1 ARMCX3 CCDS14490.1 2.6e-43 42.0 ARMCX2 CCDS5728.1 7.5e-40 48.6 ARMC10 CCDS55146.1 1.3e-37 48.8 ARMC10 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006911 195 446 PF04826 Protein of unknown function DUF634 HMMSmart IPR000225 236 276 SM00185 Armadillo IPR000225 357 398 SM00185 Armadillo ProfileScan NULL 1 21 PS51257 NULL IPR000225 247 284 PS50176 Armadillo
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 5 REAGCVAAGVVIGAGACYCVYRL 27 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057692 453 300362 100.0 100.0 NP_808816 379 300364 42.1 100.0 NP_808817 379 300364 42.1 100.0 XP_005262198 379 300364 42.1 100.0 NP_057691 379 300364 42.1 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8833 Download

>KIBB8833  1359 bp
ATGGGCCGCACTCGGGAAGCTGGCTGCGTGGCCGCTGGTGTGGTTATCGGGGCTGGTGCC
TGCTACTGTGTATACAGACTGGCTTGGGGAAGAGACGAGAACGAGAAAATCTGGGACGAA
GACGAGGAGTCTACGGACACCTCAGAGATTGGGGTTGAGACTGTGAAAGGAGCTAAAACT
AACGCTGGGGCAGGGTCTGGGGCCAAACTTCAGGGTGATTCAGAGGTCAAGCCTGAGGTG
AGTTTGGGACTCGAGGATTGTCCGGGTGTAAAAGAGAAGGCCCATTCAGGATCCCACAGC
GGAGGTGGCCTAGAGGCCAAGGCCAAGGCCCTTTTCAACACGCTGAAGGAACAGGCAAGT
GCAAAGGCAGGCAAAGGGGCTAGGGTGGGTACCATCTCTGGGAACAGGACCCTTGCACCG
AGTTTACCCTGCCCAGGAGGCAGGGGTGGAGGCTGCCACCCCACCAGGAGTGGATCTAGG
GCCGGGGGCAGGGCAAGTGGAAAATCCAAGGGAAAGGCCCGAAGTAAGAGCACCAGGGCT
CCAGCTACAACATGGCCTGTCCGGAGAGGCAAGTTCAACTTTCCTTATAAAATTGATGAT
ATTCTGAGTGCTCCCGACCTCCAAAAGGTCCTCAACATCCTGGAGCGAACAAATGATCCT
TTTATTCAAGAAGTAGCCTTGGTCACTCTGGGTAACAATGCAGCATATTCATTTAACCAG
AATGCCATACGTGAATTGGGTGGTGTCCCAATTATTGCAAAACTGATAAAAACAAAAGAC
CCCATAATTAGGGAAAAGACTTACAATGCCCTTAATAACTTGAGTGTGAACGCAGAAAAT
CAGGGCAAGATTAAGACGTACATCAGTCAAGTGTGTGATGACACCATGGTCTGTCGCTTG
GACTCAGCTGTGCAGATGGCTGGGCTAAGACTGTTAACCAACATGACTGTGACTAATCAT
TACCAACATTTGCTTTCCTATTCTTTTCCAGACTTTTTTGCTTTGTTATTCCTGGGAAAT
CACTTCACCAAGATACAGATTATGAAACTAATTATAAACTTTACTGAAAATCCAGCCATG
ACAAGAGAGCTGGTCAGTTGTAAAGTACCATCAGAATTGATTTCCCTCTTTAATAAAGAA
TGGGATAGAGAGATTCTTCTTAATATCCTTACCCTATTTGAGAATATAAATGACAACATA
AAAAATGAAGGGCTCGCATCATCCAGGAAAGAATTCAGCAGAAGTTCACTTTTTTTCTTA
TTCAAAGAGTCTGGAGTTTGTGTTAAGAAAATCAAAGCACTAGCAAATCACAATGATCTG
GTGGTGAAAGTAAAAGTCCTGAAAGTATTAACCAAACTC

ORF Protein

Cloned ORF protein sequence for pFN21AB8833 Download

>KIBB8833  453 aa
MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT
NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS
AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA
PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ
NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL
DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM
TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL
FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8833 Download

>pFN21AB8833  6064 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGCCGCACTCGGGAAGCTGGCTGCGTGGCCGC
TGGTGTGGTTATCGGGGCTGGTGCCTGCTACTGTGTATACAGACTGGCTTGGGGAAGAGA
CGAGAACGAGAAAATCTGGGACGAAGACGAGGAGTCTACGGACACCTCAGAGATTGGGGT
TGAGACTGTGAAAGGAGCTAAAACTAACGCTGGGGCAGGGTCTGGGGCCAAACTTCAGGG
TGATTCAGAGGTCAAGCCTGAGGTGAGTTTGGGACTCGAGGATTGTCCGGGTGTAAAAGA
GAAGGCCCATTCAGGATCCCACAGCGGAGGTGGCCTAGAGGCCAAGGCCAAGGCCCTTTT
CAACACGCTGAAGGAACAGGCAAGTGCAAAGGCAGGCAAAGGGGCTAGGGTGGGTACCAT
CTCTGGGAACAGGACCCTTGCACCGAGTTTACCCTGCCCAGGAGGCAGGGGTGGAGGCTG
CCACCCCACCAGGAGTGGATCTAGGGCCGGGGGCAGGGCAAGTGGAAAATCCAAGGGAAA
GGCCCGAAGTAAGAGCACCAGGGCTCCAGCTACAACATGGCCTGTCCGGAGAGGCAAGTT
CAACTTTCCTTATAAAATTGATGATATTCTGAGTGCTCCCGACCTCCAAAAGGTCCTCAA
CATCCTGGAGCGAACAAATGATCCTTTTATTCAAGAAGTAGCCTTGGTCACTCTGGGTAA
CAATGCAGCATATTCATTTAACCAGAATGCCATACGTGAATTGGGTGGTGTCCCAATTAT
TGCAAAACTGATAAAAACAAAAGACCCCATAATTAGGGAAAAGACTTACAATGCCCTTAA
TAACTTGAGTGTGAACGCAGAAAATCAGGGCAAGATTAAGACGTACATCAGTCAAGTGTG
TGATGACACCATGGTCTGTCGCTTGGACTCAGCTGTGCAGATGGCTGGGCTAAGACTGTT
AACCAACATGACTGTGACTAATCATTACCAACATTTGCTTTCCTATTCTTTTCCAGACTT
TTTTGCTTTGTTATTCCTGGGAAATCACTTCACCAAGATACAGATTATGAAACTAATTAT
AAACTTTACTGAAAATCCAGCCATGACAAGAGAGCTGGTCAGTTGTAAAGTACCATCAGA
ATTGATTTCCCTCTTTAATAAAGAATGGGATAGAGAGATTCTTCTTAATATCCTTACCCT
ATTTGAGAATATAAATGACAACATAAAAAATGAAGGGCTCGCATCATCCAGGAAAGAATT
CAGCAGAAGTTCACTTTTTTTCTTATTCAAAGAGTCTGGAGTTTGTGTTAAGAAAATCAA
AGCACTAGCAAATCACAATGATCTGGTGGTGAAAGTAAAAGTCCTGAAAGTATTAACCAA
ACTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT