RAB40A ORF clone FHC03020

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Halotag ORF Clone FHC03020

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Clone info.

Species

human

Clone Name

pFN21AB8783 Sequence (with vector) Restriction Map

Product ID

FHC03020

Flexi Clone PID

FXC03020

ORF Sequence

DNA sequence (831 bp)
Protein sequence (277 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464681]

Gene

KIBB8783

Symbol

RAB40A

Alias : RAR2, RAR2A

Description

RAB40A, member RAS oncogene family

Original Clone ID

cp00818

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 831 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 277 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35357.1 2.7e-114 100.0 RAB40A CCDS35353.1 8.8e-112 97.8 RAB40AL CCDS11816.1 7.1e-98 88.1 RAB40B CCDS10413.1 4.7e-87 74.0 RAB40C CCDS76691.1 5.2e-27 42.9 RAB15 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001806 15 36 PR00449 Ras GTPase IPR001806 56 78 PR00449 Ras GTPase IPR001806 117 130 PR00449 Ras GTPase IPR001806 152 174 PR00449 Ras GTPase HMMPfam IPR013753 16 174 PF00071 Ras IPR001496 189 223 PF07525 SOCS protein HMMSmart IPR003577 12 177 SM00173 Ras small GTPase IPR003579 15 177 SM00175 Ras small GTPase IPR003578 17 177 SM00174 Small GTPase IPR002041 20 222 SM00176 Ran GTPase IPR001496 183 226 SM00253 SOCS protein IPR001496 189 225 SM00969 SOCS protein HMMTigr IPR005225 16 156 TIGR00231 Small GTP-binding protein domain ProfileScan IPR020851 10 203 PS51419 Small GTPase IPR001496 175 228 PS50225 SOCS protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001027004 278 300405 97.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8783 Download

>KIBB8783  831 bp
ATGAGCGCCCCGGGCAGCCCCGACCAGGCCTATGACTTCCTGCTCAAGTTCCTGCTGGTG
GGCGACAGGGACGTAGGCAAGAGTGAGATCCTGGAGAGCCTGCAGGATGGTGCAGCTGAG
TCCCCGTACAGCCATCTCGGGGGGATCGACTACAAGACGACCACCATCCTGCTGGACGGC
CAGCGGGTGAAGCTGAAGCTCTGGGATACGTCGGGGCAGGGAAGATTTTGTACCATATTC
CGCTCCTACTCTCGTGGTGCACAAGGAGTGATCCTGGTCTACGACATTGCAAACCGCTGG
TCTTTCGAGGGTATGGATCGATGGATTAAGAAGATTGAGGAACATGCCCCTGGTGTCCCT
AAAATCCTGGTGGGGAATCGCCTACATCTGGCATTCAAGAGGCAGGTGCCCAGGGAGCAG
GCCCAGGCCTACGCCGAGCGCCTGGGTGTGACCTTCTTTGAGGTCAGCCCTCTGTGCAAT
TTCAACATCATAGAGTCTTTCACGGAGCTGGCCAGGATAGTGCTGCTGCGGCACAGGATG
AATTGGCTCGGGAGGCCGAGCAAGGTACTGAGCTTGCAAGACCTCTGCTGCCGCACCATC
GTGTCCTGCACACCTGTGCATCTGGTGGACAAGCTCCCGCTCCCCAGTACCTTAAGAAGC
CACCTCAAGTCCTTCTCCATGGCTAAGGGCCTGAATGCCAGGATGATGCGAGGCCTCTCC
TACTCCCTCACCACCAGCTCCACTCACAAGAGCAGCCTCTGCAAAGTGGAGATCGTCTGC
CCACCCCAGAGCCCACCCAAAAACTGCACCAGAAACAGCTGCAAAATTTCT

ORF Protein

Cloned ORF protein sequence for pFN21AB8783 Download

>KIBB8783  277 aa
MSAPGSPDQAYDFLLKFLLVGDRDVGKSEILESLQDGAAESPYSHLGGIDYKTTTILLDG
QRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVP
KILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRM
NWLGRPSKVLSLQDLCCRTIVSCTPVHLVDKLPLPSTLRSHLKSFSMAKGLNARMMRGLS
YSLTTSSTHKSSLCKVEIVCPPQSPPKNCTRNSCKIS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8783 Download

>pFN21AB8783  5536 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCGCCCCGGGCAGCCCCGACCAGGCCTATGA
CTTCCTGCTCAAGTTCCTGCTGGTGGGCGACAGGGACGTAGGCAAGAGTGAGATCCTGGA
GAGCCTGCAGGATGGTGCAGCTGAGTCCCCGTACAGCCATCTCGGGGGGATCGACTACAA
GACGACCACCATCCTGCTGGACGGCCAGCGGGTGAAGCTGAAGCTCTGGGATACGTCGGG
GCAGGGAAGATTTTGTACCATATTCCGCTCCTACTCTCGTGGTGCACAAGGAGTGATCCT
GGTCTACGACATTGCAAACCGCTGGTCTTTCGAGGGTATGGATCGATGGATTAAGAAGAT
TGAGGAACATGCCCCTGGTGTCCCTAAAATCCTGGTGGGGAATCGCCTACATCTGGCATT
CAAGAGGCAGGTGCCCAGGGAGCAGGCCCAGGCCTACGCCGAGCGCCTGGGTGTGACCTT
CTTTGAGGTCAGCCCTCTGTGCAATTTCAACATCATAGAGTCTTTCACGGAGCTGGCCAG
GATAGTGCTGCTGCGGCACAGGATGAATTGGCTCGGGAGGCCGAGCAAGGTACTGAGCTT
GCAAGACCTCTGCTGCCGCACCATCGTGTCCTGCACACCTGTGCATCTGGTGGACAAGCT
CCCGCTCCCCAGTACCTTAAGAAGCCACCTCAAGTCCTTCTCCATGGCTAAGGGCCTGAA
TGCCAGGATGATGCGAGGCCTCTCCTACTCCCTCACCACCAGCTCCACTCACAAGAGCAG
CCTCTGCAAAGTGGAGATCGTCTGCCCACCCCAGAGCCCACCCAAAAACTGCACCAGAAA
CAGCTGCAAAATTTCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT