RBMY1J ORF clone FHC02470

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC02470

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Clone info.

Species

human

Clone Name

pFN21AB7444 Sequence (with vector) Restriction Map

Product ID

FHC02470

Flexi Clone PID

FXC02470

ORF Sequence

DNA sequence (1488 bp)
Protein sequence (496 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464182]

Gene

KIBB7444

Symbol

RBMY1J

Description

RNA binding motif protein, Y-linked, family 1, member J

Original Clone ID

oc00658

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1488 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 496 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35483.1 9.6e-116 100.0 RBMY1F CCDS35484.1 9.6e-116 100.0 RBMY1J CCDS35479.1 1.1e-114 99.2 RBMY1B CCDS14796.1 1.3e-114 99.2 RBMY1A1 CCDS35480.1 2.7e-114 99.0 RBMY1D The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition BlastProDom NULL 175 219 PD922271 NULL HMMPfam IPR000504 10 79 PF00076 RNA recognition motif domain IPR012604 174 218 PF08081 RBM1CTR HMMSmart IPR000504 9 81 SM00360 RNA recognition motif domain ProfileScan IPR000504 8 85 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005049 496 400006,415000 99.2 100.0 XP_011529739 422 400006,415000 99.0 80.4 NP_001307873 459 400006,415000 91.7 100.0 XP_016885549 435 400006,415000 88.2 95.8 XP_011529740 385 400006,415000 77.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7444 Download

>KIBB7444  1488 bp
ATGGTAGAAGCAGATCATCCTGGCAAGCTTTTCATTGGTGGCCTCAATAGAGAAACCAAT
GAGAAGATGCTTAAAGCAGTATTTGGGAAACATGGTCCCATATCAGAAGTTCTTTTGATA
AAGGATCGAACCAGCAAATCCAGAGGCTTTGCATTTATTACTTTTGAGAACCCTGCAGAT
GCTAAGAATGCTGCGAAAGATATGAATGGAACGTCTTTGCATGGAAAAGCAATAAAAGTA
GAACAAGCCAAGAAACCATCTTTTCAAAGTGGTGGTAGGCGGAGACCACCAGCTTCTTCG
AGAAACAGAAGCCCTTCAGGAAGTCTGAGATCTGCAAGAGGAAGCAGTGGAGGAACAAGA
GGGTGGCTTCCCTCACATGAAGGGCACCTGGATGATGGTGGATACACTCCTGATCTCAAG
ATGAGTTATTCTAGGGGACTCATTCCAGTTAAAAGAGGTCCATCTTCAAGAAGTGGAGGT
CCTCCTCCGAAAAAATCTGCTCCTTCTGCTGTGGCAAGAAGCAATAGTTGGATGGGAAGC
CAAGGTCCCATGTCACAAAGAAGAGAGAATTATGGAGTTCCTCCACGCAGAGCGACAATA
TCTTCCTGGAGAAATGATCGCATGTCAACAAGACATGATGGTTATGCAACTAACGATGGA
AATCATCCAAGTTGCCAAGAAACGAGGGATTATGCTCCACCATCTAGAGGCTATGCATAC
CGTGATAATGGTCATTCTAATCGGGATGAACATTCCTCTAGAGGATATAGAAATCATCGA
AGTTCCCGAGAAACTAGGGATTATGCTCCACCATCTAGAGGCCATGCATACCGTGATTAT
GGTCATTCTCGTCGGGATGAAAGTTATTCTAGAGGATACAGAAATCATCGAAGTTCCCGA
GAAACTAGGGAGTATGCTCCACCATCTAGAGGCCATGGATACCGTGATTATGGTCATTCT
CGTCGACATGAAAGTTATTCTAGAGGATATAGAAATCATCCAAGTTCCCGAGAAACCAGG
GATTATGCTCCACCACATAGAGACTATGCATACCGTGATTATGGTCATTCTAGTTGGGAT
GAACATTCCTCTAGAGGATATAGTTATCATGATGGCTACGGTGAGGCCCTTGGTAGAGAT
CATTCTGAACATCTAAGTGGAAGTTCTTATAGAGATGCACTTCAGAGATACGGGACCTCT
CATGGTGCACCACCTGCAAGAGGGCCTCGGATGTCTTATGGTGGAAGCACCTGCCACGCA
TATAGTAATACACGAGATAGATATGGCAGAAGTTGGGAGAGTTACTCGAGCTGTGGTGAT
TTTCATTATTGTGATCGTGAGCATGTTTGCAGAAAAGACCAAAGGAATCCGCCTTCTCTG
GGTAGGGTGCTCCCTGATCCTCGTGAAGCATATGGTAGCTCAAGTTATGTGGCATCTATA
GTAGATGGTGGGGAGAGTCGATCTGAAAAAGGAGACTCGAGCAGATAT

ORF Protein

Cloned ORF protein sequence for pFN21AB7444 Download

>KIBB7444  496 aa
MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPAD
AKNAAKDMNGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLRSARGSSGGTR
GWLPSHEGHLDDGGYTPDLKMSYSRGLIPVKRGPSSRSGGPPPKKSAPSAVARSNSWMGS
QGPMSQRRENYGVPPRRATISSWRNDRMSTRHDGYATNDGNHPSCQETRDYAPPSRGYAY
RDNGHSNRDEHSSRGYRNHRSSRETRDYAPPSRGHAYRDYGHSRRDESYSRGYRNHRSSR
ETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHPSSRETRDYAPPHRDYAYRDYGHSSWD
EHSSRGYSYHDGYGEALGRDHSEHLSGSSYRDALQRYGTSHGAPPARGPRMSYGGSTCHA
YSNTRDRYGRSWESYSSCGDFHYCDREHVCRKDQRNPPSLGRVLPDPREAYGSSSYVASI
VDGGESRSEKGDSSRY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7444 Download

>pFN21AB7444  6193 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGTAGAAGCAGATCATCCTGGCAAGCTTTTCAT
TGGTGGCCTCAATAGAGAAACCAATGAGAAGATGCTTAAAGCAGTATTTGGGAAACATGG
TCCCATATCAGAAGTTCTTTTGATAAAGGATCGAACCAGCAAATCCAGAGGCTTTGCATT
TATTACTTTTGAGAACCCTGCAGATGCTAAGAATGCTGCGAAAGATATGAATGGAACGTC
TTTGCATGGAAAAGCAATAAAAGTAGAACAAGCCAAGAAACCATCTTTTCAAAGTGGTGG
TAGGCGGAGACCACCAGCTTCTTCGAGAAACAGAAGCCCTTCAGGAAGTCTGAGATCTGC
AAGAGGAAGCAGTGGAGGAACAAGAGGGTGGCTTCCCTCACATGAAGGGCACCTGGATGA
TGGTGGATACACTCCTGATCTCAAGATGAGTTATTCTAGGGGACTCATTCCAGTTAAAAG
AGGTCCATCTTCAAGAAGTGGAGGTCCTCCTCCGAAAAAATCTGCTCCTTCTGCTGTGGC
AAGAAGCAATAGTTGGATGGGAAGCCAAGGTCCCATGTCACAAAGAAGAGAGAATTATGG
AGTTCCTCCACGCAGAGCGACAATATCTTCCTGGAGAAATGATCGCATGTCAACAAGACA
TGATGGTTATGCAACTAACGATGGAAATCATCCAAGTTGCCAAGAAACGAGGGATTATGC
TCCACCATCTAGAGGCTATGCATACCGTGATAATGGTCATTCTAATCGGGATGAACATTC
CTCTAGAGGATATAGAAATCATCGAAGTTCCCGAGAAACTAGGGATTATGCTCCACCATC
TAGAGGCCATGCATACCGTGATTATGGTCATTCTCGTCGGGATGAAAGTTATTCTAGAGG
ATACAGAAATCATCGAAGTTCCCGAGAAACTAGGGAGTATGCTCCACCATCTAGAGGCCA
TGGATACCGTGATTATGGTCATTCTCGTCGACATGAAAGTTATTCTAGAGGATATAGAAA
TCATCCAAGTTCCCGAGAAACCAGGGATTATGCTCCACCACATAGAGACTATGCATACCG
TGATTATGGTCATTCTAGTTGGGATGAACATTCCTCTAGAGGATATAGTTATCATGATGG
CTACGGTGAGGCCCTTGGTAGAGATCATTCTGAACATCTAAGTGGAAGTTCTTATAGAGA
TGCACTTCAGAGATACGGGACCTCTCATGGTGCACCACCTGCAAGAGGGCCTCGGATGTC
TTATGGTGGAAGCACCTGCCACGCATATAGTAATACACGAGATAGATATGGCAGAAGTTG
GGAGAGTTACTCGAGCTGTGGTGATTTTCATTATTGTGATCGTGAGCATGTTTGCAGAAA
AGACCAAAGGAATCCGCCTTCTCTGGGTAGGGTGCTCCCTGATCCTCGTGAAGCATATGG
TAGCTCAAGTTATGTGGCATCTATAGTAGATGGTGGGGAGAGTCGATCTGAAAAAGGAGA
CTCGAGCAGATATGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT