LRRTM2 ORF clone FHC00531

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Halotag ORF Clone FHC00531

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Clone info.

Species

human

Clone Name

pFN21ASDA0416 Sequence (with vector) Restriction Map

Product ID

FHC00531

Flexi Clone PID

FXC00531

ORF Sequence

DNA sequence (1548 bp)
Protein sequence (516 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383877]

Gene

KIAA0416

Symbol

LRRTM2

Description

leucine rich repeat transmembrane neuronal 2

Original Clone ID

hh00236

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1548 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 516 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS47272.1 5.6e-199 100.0 LRRTM2 CCDS1966.1 1.5e-91 47.6 LRRTM1 CCDS7270.1 2.9e-82 44.6 LRRTM3 CCDS46347.1 3.9e-80 43.5 LRRTM4 CCDS46346.1 7.3e-80 43.3 LRRTM4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan NULL 135 148 PR00019 NULL NULL 180 193 PR00019 NULL HMMPfam IPR001611 110 132 PF00560 Leucine-rich repeat IPR001611 134 156 PF00560 Leucine-rich repeat IPR001611 158 179 PF00560 Leucine-rich repeat IPR001611 182 204 PF00560 Leucine-rich repeat IPR001611 206 225 PF00560 Leucine-rich repeat HMMSmart IPR003591 84 107 SM00369 Leucine-rich repeat IPR003591 108 131 SM00369 Leucine-rich repeat IPR003591 132 155 SM00369 Leucine-rich repeat IPR003591 156 179 SM00369 Leucine-rich repeat IPR003591 180 203 SM00369 Leucine-rich repeat IPR003591 204 224 SM00369 Leucine-rich repeat IPR003591 228 251 SM00369 Leucine-rich repeat IPR003591 252 275 SM00369 Leucine-rich repeat IPR003591 276 299 SM00369 Leucine-rich repeat ProfileScan IPR001611 63 83 PS51450 Leucine-rich repeat IPR001611 86 107 PS51450 Leucine-rich repeat IPR001611 110 131 PS51450 Leucine-rich repeat IPR001611 134 155 PS51450 Leucine-rich repeat IPR001611 158 179 PS51450 Leucine-rich repeat IPR001611 182 203 PS51450 Leucine-rich repeat IPR001611 206 227 PS51450 Leucine-rich repeat IPR001611 230 251 PS51450 Leucine-rich repeat IPR001611 254 275 PS51450 Leucine-rich repeat IPR001611 278 299 PS51450 Leucine-rich repeat
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 12 PMLAAIYAMSMVLKMLPALGMAC 34 SECONDARY 23 2 423 VITGTMALLFSFFFIIFIVFIS 444 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056379 516 610868 100.0 100.0 XP_016859475 522 610867 47.6 100.0 NP_849161 522 610867 47.6 100.0 XP_016859476 522 610867 47.6 100.0 NP_821079 581 610869 44.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0416 Download

>KIAA0416  1548 bp
ATGGGCTTACATTTCAAGTGGCCATTAGGGGCCCCTATGCTGGCAGCAATATATGCAATG
AGTATGGTTTTAAAAATGCTGCCTGCCCTGGGTATGGCGTGTCCACCCAAATGCCGCTGC
GAGAAGCTGCTCTTCTACTGCGACTCTCAGGGCTTCCACTCAGTGCCAAACGCCACAGAC
AAGGGCTCTCTGGGCCTGTCCCTGAGGCACAATCACATCACAGAGCTCGAAAGAGATCAA
TTTGCCAGCTTCAGTCAACTTACTTGGCTCCACTTAGATCACAATCAAATTTCAACAGTA
AAAGAAGATGCTTTTCAAGGACTATATAAACTTAAGGAATTAATCTTAAGTTCCAACAAA
ATATTTTACTTGCCAAACACAACTTTTACCCAACTGATTAACCTGCAAAATTTGGACCTG
TCTTTTAATCAGCTGTCATCTCTGCACCCAGAGCTCTTCTATGGCCTTCGGAAGCTGCAG
ACCTTGCATTTACGTTCCAACTCCCTGCGGACTATCCCAGTACGCCTGTTCTGGGACTGT
CGTAGTCTGGAGTTTCTGGATTTGAGCACAAATCGTTTGCGAAGTTTGGCTCGCAATGGA
TTTGCAGGATTAATTAAACTGAGAGAGCTTCACCTAGAGCACAACCAGCTGACGAAGATT
AATTTTGCTCATTTCCTACGGCTAAGCAGTCTGCACACGCTCTTCTTACAATGGAACAAA
ATCAGCAACTTGACATGTGGGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAGACCTG
ACTGGAAATGAAATCAAAGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAA
ATACTACTCATGGATAACAACAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTG
AGATCCCTCACAACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGT
GCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCAC
AGTCCTGACCACACCCAAGGAGAGGATATTCTAGATGCAGTCCATGGATTTCAGCTCTGC
TGGAATTTGTCAACCACTGTCACTGTCATGGCTACAACTTATAGAGATCCAACCACTGAA
TATACAAAAAGAATAAGCTCATCAAGTTACCATGTGGGAGACAAAGAAATCCCAACTACT
GCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGACAATGCCATCTTCACT
CAGCGGGTAATTACGGGAACAATGGCTTTATTGTTTTCTTTCTTTTTTATTATTTTTATA
GTGTTCATCTCCAGGAAGTGCTGCCCTCCCACTTTAAGAAGAATTAGGCAGTGCTCAATG
GTTCAGAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGAC
CAAGGACCGTATAATGAATATGAACCCACCCATGAAGGACCCTTCATCATCATTAATGGT
TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTA

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0416 Download

>KIAA0416  516 aa
MGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNATD
KGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNK
IFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDC
RSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK
ISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL
RSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLC
WNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTTEEHFPEPDNAIFT
QRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQLRSQTRLHMSNMSD
QGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0416 Download

>pFN21ASDA0416  6277 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGGCTTACATTTCAA
GTGGCCATTAGGGGCCCCTATGCTGGCAGCAATATATGCAATGAGTATGGTTTTAAAAAT
GCTGCCTGCCCTGGGTATGGCGTGTCCACCCAAATGCCGCTGCGAGAAGCTGCTCTTCTA
CTGCGACTCTCAGGGCTTCCACTCAGTGCCAAACGCCACAGACAAGGGCTCTCTGGGCCT
GTCCCTGAGGCACAATCACATCACAGAGCTCGAAAGAGATCAATTTGCCAGCTTCAGTCA
ACTTACTTGGCTCCACTTAGATCACAATCAAATTTCAACAGTAAAAGAAGATGCTTTTCA
AGGACTATATAAACTTAAGGAATTAATCTTAAGTTCCAACAAAATATTTTACTTGCCAAA
CACAACTTTTACCCAACTGATTAACCTGCAAAATTTGGACCTGTCTTTTAATCAGCTGTC
ATCTCTGCACCCAGAGCTCTTCTATGGCCTTCGGAAGCTGCAGACCTTGCATTTACGTTC
CAACTCCCTGCGGACTATCCCAGTACGCCTGTTCTGGGACTGTCGTAGTCTGGAGTTTCT
GGATTTGAGCACAAATCGTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATTAATTAA
ACTGAGAGAGCTTCACCTAGAGCACAACCAGCTGACGAAGATTAATTTTGCTCATTTCCT
ACGGCTAAGCAGTCTGCACACGCTCTTCTTACAATGGAACAAAATCAGCAACTTGACATG
TGGGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAGACCTGACTGGAAATGAAATCAA
AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTACTCATGGATAA
CAACAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAACCGT
TGGTCTCTCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCT
GGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCACAGTCCTGACCACACCCA
AGGAGAGGATATTCTAGATGCAGTCCATGGATTTCAGCTCTGCTGGAATTTGTCAACCAC
TGTCACTGTCATGGCTACAACTTATAGAGATCCAACCACTGAATATACAAAAAGAATAAG
CTCATCAAGTTACCATGTGGGAGACAAAGAAATCCCAACTACTGCAGGCATAGCAGTTAC
TACCGAGGAACACTTTCCTGAACCAGACAATGCCATCTTCACTCAGCGGGTAATTACGGG
AACAATGGCTTTATTGTTTTCTTTCTTTTTTATTATTTTTATAGTGTTCATCTCCAGGAA
GTGCTGCCCTCCCACTTTAAGAAGAATTAGGCAGTGCTCAATGGTTCAGAACCACAGGCA
GCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGACCAAGGACCGTATAATGA
ATATGAACCCACCCATGAAGGACCCTTCATCATCATTAATGGTTATGGACAGTGCAAGTG
TCAGCAGCTGCCATACAAAGAATGTGAAGTATACGTAGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT