pF1KA1273

Gene/Protein Characteristic Table for pF1KA1273

Species

human

Clone Name

Product ID

FXC00209

Corresponding
HaloTag Clone PID

ORF Sequence

Linker Type

Flexi type

The extra Val codon is attached to the 3'-end of the ORF, because a Pme I site ...

Vector Type

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384588]

Gene

Symbol

ATAD3B

Alias : AAA-TOB3, TOB3

Description

ATPase family, AAA domain containing 3B

Original Clone ID

Features of the protein sequence

Length: 602 aa
Result of homology search against nr database ( FASTA output, Multiple alignment) Entry Exp ID% Protein Source EAW56192 2.1e-200 100.0 ATPase family, ... Homo sapiens Q5T9A4 8.4e-184 99.8 ATPase family A... Homo sapiens AAH02542 1.7e-183 99.6 ATPase family, ... Homo sapiens Q9NVI7 2.5e-159 93.4 ATPase family A... Homo sapiens BAB14787 2.7e-159 100.0 unnamed protein... Homo sapiens The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003959 301 497 PF00004 AAA ATPase HMMSmart IPR003593 298 431 SM00382 AAA+ ATPase
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MQLEALNLLHTLVWARSLCRAGA 23 SECONDARY 23 2 200 KVTATVAGLTLLAVGVYSAKNAT 222 PRIMARY 23
Result of homology search against disease genes in OMIM database

H_id	H_len (aa)	OMIM_No.	ID (%)	Q_ali/Q_len (%)
NP_114127	648	612317	100.0	92.4
NP_060658	634	612316	97.5	89.0