Gene/Protein Characteristic Table for
pF1KA1116
Species
human
Product ID
FXC00180
Linker Type
Cloning Site
SgfI-PmeI
Gene
KIAA1116
Description
SR-related CTD-associated factor 8
Original Clone ID
eh00729
Length: 3813 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 1271 aa
Result of homology search against nr database (
FASTA output,
Multiple alignment)
Entry Exp ID% Protein Source Q9UPN6 0 99.9 Putative RNA-bi... Homo sapiens XP_527544 0 99.7 RNA-binding mot... Pan troglodytes AAH70071 0 99.8 RBM16 protein [... Homo sapiens XP_001493696 0 96.2 similar to Puta... Equus caballus XP_533458 0 96.1 similar to Puta... Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR006903 56 124 PF04818 Protein of unknown function DUF618 IPR000504 479 546 PF00076 RNA recognition motif HMMSmart IPR006569 6 136 SM00582 Regulation of nuclear pre-mRNA protein IPR000504 478 547 SM00360 RNA recognition motif ProfileScan IPR000504 477 551 PS50102 RNA recognition motif Inquiries or Suggestions ?
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