-
SpecieshumanProduct IDFXC11959Cloning SiteSgfI-PmeIGeneKIBB6207SymbolZNF333Descriptionzinc finger protein 333, transcript variant 1Original Clone IDcs00807
Length: 1995 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 665 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS12316.1 1.4e-163 100.0 ZNF333 CCDS74298.1 2.6e-69 100.0 ZNF333 CCDS7195.1 1.2e-46 45.7 ZNF25 CCDS6871.1 4.5e-46 44.2 ZNF79 CCDS74472.1 1.1e-45 39.5 ZNF135
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 4 41 PF01352 Krueppel-associated box IPR001909 203 242 PF01352 Krueppel-associated box IPR007087 366 388 PF00096 Zinc finger IPR007087 394 416 PF00096 Zinc finger IPR007087 422 444 PF00096 Zinc finger IPR007087 450 472 PF00096 Zinc finger IPR007087 478 500 PF00096 Zinc finger IPR007087 506 528 PF00096 Zinc finger IPR007087 534 556 PF00096 Zinc finger IPR007087 562 584 PF00096 Zinc finger IPR007087 590 612 PF00096 Zinc finger IPR007087 618 640 PF00096 Zinc finger HMMSmart IPR001909 4 63 SM00349 Krueppel-associated box IPR001909 203 263 SM00349 Krueppel-associated box IPR015880 366 388 SM00355 Zinc finger IPR003656 376 419 SM00614 Zinc finger IPR015880 394 416 SM00355 Zinc finger IPR015880 422 444 SM00355 Zinc finger IPR015880 450 472 SM00355 Zinc finger IPR015880 478 500 SM00355 Zinc finger IPR015880 506 528 SM00355 Zinc finger IPR003656 515 559 SM00614 Zinc finger IPR015880 534 556 SM00355 Zinc finger IPR015880 562 584 SM00355 Zinc finger IPR015880 590 612 SM00355 Zinc finger IPR015880 618 640 SM00355 Zinc finger ProfileScan IPR001909 4 74 PS50805 Krueppel-associated box IPR001909 203 274 PS50805 Krueppel-associated box IPR007087 366 393 PS50157 Zinc finger IPR007087 394 421 PS50157 Zinc finger IPR007087 422 449 PS50157 Zinc finger IPR007087 450 477 PS50157 Zinc finger IPR007087 478 505 PS50157 Zinc finger IPR007087 506 533 PS50157 Zinc finger IPR007087 534 561 PS50157 Zinc finger IPR007087 562 589 PS50157 Zinc finger IPR007087 590 617 PS50157 Zinc finger IPR007087 618 645 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115809 665 611811 100.0 100.0 XP_011526664 665 611811 100.0 100.0 XP_016882856 665 611811 100.0 100.0 XP_016882857 578 611811 100.0 86.9 XP_011526669 556 611811 100.0 83.6 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB6207 Download>KIBB6207 1995 bp ATGGAATCCGTCACCTTTGAGGATGTGGCCGTGGAGTTCATCCAGGAGTGGGCATTGCTG GACAGCGCACGGAGGAGCCTGTGCAAATACAGGATGCTTGACCAGTGCAGGACCCTGGCC TCCAGGGGAACTCCACCATGCAAACCCAGTTGTGTCTCCCAGCTGGGGCAAAGAGCAGAG CCAAAGGCAACAGAACGAGGGATTCTCCGTGCCACAGGTGTTGCCTGGGAATCTCAACTT AAACCCGAAGAGTTGCCTTCTATGCAGGATCTTTTGGAAGAAGCATCCTCCAGGGACATG CAAATGGGGCCGGGGCTGTTCCTGAGGATGCAGCTGGTGCCCTCCATAGAAGAGAGGGAG ACACCATTGACTCGAGAGGACCGGCCAGCTCTCCAGGAGCCGCCTTGGTCTCTGGGATGC ACGGGACTGAAGGCCGCTATGCAGATTCAGAGGGTGGTGATACCAGTGCCTACACTGGGC CACCGCAACCCATGGGTGGCCAGGGATTCTGCTGTGCCTGCACGTGACCCTGCCTGGCTT CAGGAGGACAAAGTGGAGGAAGAAGCTATGGCTCCTGGGCTGCCAACCGCCTGTTCACAG GAACCAGTCACCTTTGCAGATGTGGCTGTGGTGTTCACCCCAGAAGAATGGGTGTTTCTG GACTCTACTCAGAGGAGCCTGTATAGAGATGTGATGCTGGAGAACTACAGGAACCTGGCC TCTGTGGCTGATCAACTGTGCAAACCCAATGCGTTGTCTTATTTGGAAGAAAGAGGAGAG CAGTGGACCACTGACAGGGGCGTCCTCTCAGACACCTGTGCAGAACCTCAGTGTCAACCC CAAGAGGCAATTCCTAGCCAAGATACTTTTACAGAGATCCTGTCCATTGATGTGAAAGGG GAGCAACCTCAGCCTGGAGAAAAACTCTATAAATATAATGAACTTGAGAAACCTTTTAAC AGCATTGAACCACTTTTCCAGTACCAGAGAATTCATGCTGGAGAGGCATCCTGTGAATGT CAAGAGATTAGAAATTCCTTCTTCCAGAGTGCCCACCTAATTGTGCCCGAGAAAATCCGT AGTGGGGATAAATCCTATGCATGTAACAAATGTGAAAAATCCTTCAGATACAGCTCTGAC CTTATCAGGCATGAGAAGACTCATACTGCAGAGAAGTGCTTTGACTGTCAAGAATGTGGG CAAGCCTTCAAATATTCCTCGAATCTCCGGCGACACATGAGAACCCATACCGGAGAGAAG CCATTTGAATGTAGTCAGTGTGGGAAAACCTTCACGAGGAACTTTAACCTGATTTTGCAC CAGAGAAACCACACAGGAGAGAAGCCCTACGAGTGTAAAGATTGTGGGAAAGCCTTCAAT CAGCCATCATCCCTCAGGAGCCACGTGAGAACTCACACTGGAGAGAAGCCCTTTGAATGC AGCCAGTGTGGGAAAGCCTTCAGGGAACACTCTTCACTGAAGACACATCTGCGAACCCAT ACCAGAGAGAAACCATATGAATGCAACCAGTGTGGCAAGCCCTTCCGGACGAGCACTCAT CTGAACGTGCACAAGAGGATACACACAGGGGAGAAACTGTATGAGTGCGCGACTTGCGGT CAGGTCTTGAGTCGTCTTTCAACCCTGAAGAGTCACATGCGAACTCACACTGGAGAGAAG CCCTATGTGTGCCAGGAATGTGGGCGAGCCTTCAGTGAGCCCTCATCCCTCAGGAAACAT GCAAGGACTCACAGTGGCAAGAAGCCCTATGCATGCCAGGAATGCGGGCGAGCCTTTGGT CAGTCTTCACATCTTATTGTACATGTGAGAACACACAGTGCCGGGAGACCCTATCAATGT AATCAGTGTGAGAAAGCCTTCAGGCACAGCTCCTCACTCACTGTACACAAAAGAACCCAT GTGGGAAGAGAGACCATTAGGAATGGCAGCCTGCCTTTATCCATGTCTCATCCATACTGT GGGCCCCTTGCTAAT
Cloned ORF protein sequence for pF1KB6207 Download>KIBB6207 665 aa MESVTFEDVAVEFIQEWALLDSARRSLCKYRMLDQCRTLASRGTPPCKPSCVSQLGQRAE PKATERGILRATGVAWESQLKPEELPSMQDLLEEASSRDMQMGPGLFLRMQLVPSIEERE TPLTREDRPALQEPPWSLGCTGLKAAMQIQRVVIPVPTLGHRNPWVARDSAVPARDPAWL QEDKVEEEAMAPGLPTACSQEPVTFADVAVVFTPEEWVFLDSTQRSLYRDVMLENYRNLA SVADQLCKPNALSYLEERGEQWTTDRGVLSDTCAEPQCQPQEAIPSQDTFTEILSIDVKG EQPQPGEKLYKYNELEKPFNSIEPLFQYQRIHAGEASCECQEIRNSFFQSAHLIVPEKIR SGDKSYACNKCEKSFRYSSDLIRHEKTHTAEKCFDCQECGQAFKYSSNLRRHMRTHTGEK PFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHVRTHTGEKPFEC SQCGKAFREHSSLKTHLRTHTREKPYECNQCGKPFRTSTHLNVHKRIHTGEKLYECATCG QVLSRLSTLKSHMRTHTGEKPYVCQECGRAFSEPSSLRKHARTHSGKKPYACQECGRAFG QSSHLIVHVRTHSAGRPYQCNQCEKAFRHSSSLTVHKRTHVGRETIRNGSLPLSMSHPYC GPLAN
Nucleotide Sequence (with vector) for pF1KB6207 Download>pF1KB6207 5108 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAATCCGTC ACCTTTGAGGATGTGGCCGTGGAGTTCATCCAGGAGTGGGCATTGCTGGACAGCGCACGG AGGAGCCTGTGCAAATACAGGATGCTTGACCAGTGCAGGACCCTGGCCTCCAGGGGAACT CCACCATGCAAACCCAGTTGTGTCTCCCAGCTGGGGCAAAGAGCAGAGCCAAAGGCAACA GAACGAGGGATTCTCCGTGCCACAGGTGTTGCCTGGGAATCTCAACTTAAACCCGAAGAG TTGCCTTCTATGCAGGATCTTTTGGAAGAAGCATCCTCCAGGGACATGCAAATGGGGCCG GGGCTGTTCCTGAGGATGCAGCTGGTGCCCTCCATAGAAGAGAGGGAGACACCATTGACT CGAGAGGACCGGCCAGCTCTCCAGGAGCCGCCTTGGTCTCTGGGATGCACGGGACTGAAG GCCGCTATGCAGATTCAGAGGGTGGTGATACCAGTGCCTACACTGGGCCACCGCAACCCA TGGGTGGCCAGGGATTCTGCTGTGCCTGCACGTGACCCTGCCTGGCTTCAGGAGGACAAA GTGGAGGAAGAAGCTATGGCTCCTGGGCTGCCAACCGCCTGTTCACAGGAACCAGTCACC TTTGCAGATGTGGCTGTGGTGTTCACCCCAGAAGAATGGGTGTTTCTGGACTCTACTCAG AGGAGCCTGTATAGAGATGTGATGCTGGAGAACTACAGGAACCTGGCCTCTGTGGCTGAT CAACTGTGCAAACCCAATGCGTTGTCTTATTTGGAAGAAAGAGGAGAGCAGTGGACCACT GACAGGGGCGTCCTCTCAGACACCTGTGCAGAACCTCAGTGTCAACCCCAAGAGGCAATT CCTAGCCAAGATACTTTTACAGAGATCCTGTCCATTGATGTGAAAGGGGAGCAACCTCAG CCTGGAGAAAAACTCTATAAATATAATGAACTTGAGAAACCTTTTAACAGCATTGAACCA CTTTTCCAGTACCAGAGAATTCATGCTGGAGAGGCATCCTGTGAATGTCAAGAGATTAGA AATTCCTTCTTCCAGAGTGCCCACCTAATTGTGCCCGAGAAAATCCGTAGTGGGGATAAA TCCTATGCATGTAACAAATGTGAAAAATCCTTCAGATACAGCTCTGACCTTATCAGGCAT GAGAAGACTCATACTGCAGAGAAGTGCTTTGACTGTCAAGAATGTGGGCAAGCCTTCAAA TATTCCTCGAATCTCCGGCGACACATGAGAACCCATACCGGAGAGAAGCCATTTGAATGT AGTCAGTGTGGGAAAACCTTCACGAGGAACTTTAACCTGATTTTGCACCAGAGAAACCAC ACAGGAGAGAAGCCCTACGAGTGTAAAGATTGTGGGAAAGCCTTCAATCAGCCATCATCC CTCAGGAGCCACGTGAGAACTCACACTGGAGAGAAGCCCTTTGAATGCAGCCAGTGTGGG AAAGCCTTCAGGGAACACTCTTCACTGAAGACACATCTGCGAACCCATACCAGAGAGAAA CCATATGAATGCAACCAGTGTGGCAAGCCCTTCCGGACGAGCACTCATCTGAACGTGCAC AAGAGGATACACACAGGGGAGAAACTGTATGAGTGCGCGACTTGCGGTCAGGTCTTGAGT CGTCTTTCAACCCTGAAGAGTCACATGCGAACTCACACTGGAGAGAAGCCCTATGTGTGC CAGGAATGTGGGCGAGCCTTCAGTGAGCCCTCATCCCTCAGGAAACATGCAAGGACTCAC AGTGGCAAGAAGCCCTATGCATGCCAGGAATGCGGGCGAGCCTTTGGTCAGTCTTCACAT CTTATTGTACATGTGAGAACACACAGTGCCGGGAGACCCTATCAATGTAATCAGTGTGAG AAAGCCTTCAGGCACAGCTCCTCACTCACTGTACACAAAAGAACCCATGTGGGAAGAGAG ACCATTAGGAATGGCAGCCTGCCTTTATCCATGTCTCATCCATACTGTGGGCCCCTTGCT AATGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT CCGCTCAT
more Linker info
