GFRA2 ORF clone FXC11498

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Flexi ORF Clone FXC11498

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Clone info.

Species

human

Clone Name

pF1KB4017 Sequence (with vector) Restriction Map

Product ID

FXC11498

HaloTag Clone PID

FHC11498

ORF Sequence

DNA sequence (1392 bp)
Protein sequence (464 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529071]

Gene

KIBB4017

Symbol

GFRA2

Alias : GDNFRB, NRTNR-ALPHA, NTNRA, RETL2, TRNR2

Description

GDNF family receptor alpha 2, transcript variant 1

Original Clone ID

fj13410

Features of the cloned ORF sequence

Description

Length: 1392 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 464 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS47816.1 1.4e-192 100.0 GFRA2 CCDS55208.1 2.4e-141 100.0 GFRA2 CCDS55207.1 6.4e-131 97.6 GFRA2 CCDS44481.1 1.7e-83 49.8 GFRA1 CCDS7593.1 4.6e-83 49.8 GFRA1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003504 67 76 PR01318 Glial cell line-derived neurotrophic factor receptor alpha 2 IPR003438 93 113 PR01316 Glial cell line-derived neurotrophic factor receptor IPR003504 183 192 PR01318 Glial cell line-derived neurotrophic factor receptor alpha 2 IPR003438 194 211 PR01316 Glial cell line-derived neurotrophic factor receptor IPR003438 229 241 PR01316 Glial cell line-derived neurotrophic factor receptor IPR003438 263 271 PR01316 Glial cell line-derived neurotrophic factor receptor IPR003438 293 310 PR01316 Glial cell line-derived neurotrophic factor receptor IPR003438 323 336 PR01316 Glial cell line-derived neurotrophic factor receptor IPR003504 372 391 PR01318 Glial cell line-derived neurotrophic factor receptor alpha 2 IPR003504 394 409 PR01318 Glial cell line-derived neurotrophic factor receptor alpha 2 IPR003504 412 427 PR01318 Glial cell line-derived neurotrophic factor receptor alpha 2 HMMPfam IPR016017 40 113 PF02351 GDNF/GAS1 IPR016017 161 241 PF02351 GDNF/GAS1 IPR016017 251 347 PF02351 GDNF/GAS1 HMMSmart IPR016017 40 117 SM00907 GDNF/GAS1 IPR016017 161 241 SM00907 GDNF/GAS1 IPR016017 251 347 SM00907 GDNF/GAS1
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_006716390 464 601956 100.0 100.0 NP_001486 464 601956 100.0 100.0 XP_011542786 464 601956 100.0 100.0 NP_005255 465 601496 49.8 91.2 XP_005269753 465 601496 49.8 91.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB4017 Download

>KIBB4017  1392 bp
ATGATCTTGGCAAACGTCTTCTGCCTCTTCTTCTTTCTAGACGAGACCCTCCGCTCTTTG
GCCAGCCCTTCCTCCCTGCAGGGCCCCGAGCTCCACGGCTGGCGCCCCCCAGTGGACTGT
GTCCGGGCCAATGAGCTGTGTGCCGCCGAATCCAACTGCAGCTCTCGCTACCGCACTCTG
CGGCAGTGCCTGGCAGGCCGCGACCGCAACACCATGCTGGCCAACAAGGAGTGCCAGGCG
GCCTTGGAGGTCTTGCAGGAGAGCCCGCTGTACGACTGCCGCTGCAAGCGGGGCATGAAG
AAGGAGCTGCAGTGTCTGCAGATCTACTGGAGCATCCACCTGGGGCTGACCGAGGGTGAG
GAGTTCTACGAAGCCTCCCCCTATGAGCCGGTGACCTCCCGCCTCTCGGACATCTTCAGG
CTTGCTTCAATCTTCTCAGGGACAGGGGCAGACCCGGTGGTCAGCGCCAAGAGCAACCAT
TGCCTGGATGCTGCCAAGGCCTGCAACCTGAATGACAACTGCAAGAAGCTGCGCTCCTCC
TACATCTCCATCTGCAACCGCGAGATCTCGCCCACCGAGCGCTGCAACCGCCGCAAGTGC
CACAAGGCCCTGCGCCAGTTCTTCGACCGGGTGCCCAGCGAGTACACCTACCGCATGCTC
TTCTGCTCCTGCCAAGACCAGGCGTGCGCTGAGCGCCGCCGGCAAACCATCCTGCCCAGC
TGCTCCTATGAGGACAAGGAGAAGCCCAACTGCCTGGACCTGCGTGGCGTGTGCCGGACT
GACCACCTGTGTCGGTCCCGGCTGGCCGACTTCCATGCCAATTGTCGAGCCTCCTACCAG
ACGGTCACCAGCTGCCCTGCGGACAATTACCAGGCGTGTCTGGGCTCTTATGCTGGCATG
ATTGGGTTTGACATGACACCTAACTATGTGGACTCCAGCCCCACTGGCATCGTGGTGTCC
CCCTGGTGCAGCTGTCGTGGCAGCGGGAACATGGAGGAGGAGTGTGAGAAGTTCCTCAGG
GACTTCACCGAGAACCCATGCCTCCGGAACGCCATCCAGGCCTTTGGCAACGGCACGGAC
GTGAACGTGTCCCCAAAAGGCCCCTCGTTCCAGGCCACCCAGGCCCCTCGGGTGGAGAAG
ACGCCTTCTTTGCCAGATGACCTCAGTGACAGTACCAGCTTGGGGACCAGTGTCATCACC
ACCTGCACGTCTGTCCAGGAGCAGGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATG
TGCTTCACAGAGCTCACGACAAATATCATCCCAGGGAGTAACAAGGTGATCAAACCTAAC
TCAGGCCCCAGCAGAGCCAGACCGTCGGCTGCCTTGACCGTGCTGTCTGTCCTGATGCTG
AAACTGGCCTTG

ORF Protein

Cloned ORF protein sequence for pF1KB4017 Download

>KIBB4017  464 aa
MILANVFCLFFFLDETLRSLASPSSLQGPELHGWRPPVDCVRANELCAAESNCSSRYRTL
RQCLAGRDRNTMLANKECQAALEVLQESPLYDCRCKRGMKKELQCLQIYWSIHLGLTEGE
EFYEASPYEPVTSRLSDIFRLASIFSGTGADPVVSAKSNHCLDAAKACNLNDNCKKLRSS
YISICNREISPTERCNRRKCHKALRQFFDRVPSEYTYRMLFCSCQDQACAERRRQTILPS
CSYEDKEKPNCLDLRGVCRTDHLCRSRLADFHANCRASYQTVTSCPADNYQACLGSYAGM
IGFDMTPNYVDSSPTGIVVSPWCSCRGSGNMEEECEKFLRDFTENPCLRNAIQAFGNGTD
VNVSPKGPSFQATQAPRVEKTPSLPDDLSDSTSLGTSVITTCTSVQEQGLKANNSKELSM
CFTELTTNIIPGSNKVIKPNSGPSRARPSAALTVLSVLMLKLAL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB4017 Download

>pF1KB4017  4505 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATCTTGGCA
AACGTCTTCTGCCTCTTCTTCTTTCTAGACGAGACCCTCCGCTCTTTGGCCAGCCCTTCC
TCCCTGCAGGGCCCCGAGCTCCACGGCTGGCGCCCCCCAGTGGACTGTGTCCGGGCCAAT
GAGCTGTGTGCCGCCGAATCCAACTGCAGCTCTCGCTACCGCACTCTGCGGCAGTGCCTG
GCAGGCCGCGACCGCAACACCATGCTGGCCAACAAGGAGTGCCAGGCGGCCTTGGAGGTC
TTGCAGGAGAGCCCGCTGTACGACTGCCGCTGCAAGCGGGGCATGAAGAAGGAGCTGCAG
TGTCTGCAGATCTACTGGAGCATCCACCTGGGGCTGACCGAGGGTGAGGAGTTCTACGAA
GCCTCCCCCTATGAGCCGGTGACCTCCCGCCTCTCGGACATCTTCAGGCTTGCTTCAATC
TTCTCAGGGACAGGGGCAGACCCGGTGGTCAGCGCCAAGAGCAACCATTGCCTGGATGCT
GCCAAGGCCTGCAACCTGAATGACAACTGCAAGAAGCTGCGCTCCTCCTACATCTCCATC
TGCAACCGCGAGATCTCGCCCACCGAGCGCTGCAACCGCCGCAAGTGCCACAAGGCCCTG
CGCCAGTTCTTCGACCGGGTGCCCAGCGAGTACACCTACCGCATGCTCTTCTGCTCCTGC
CAAGACCAGGCGTGCGCTGAGCGCCGCCGGCAAACCATCCTGCCCAGCTGCTCCTATGAG
GACAAGGAGAAGCCCAACTGCCTGGACCTGCGTGGCGTGTGCCGGACTGACCACCTGTGT
CGGTCCCGGCTGGCCGACTTCCATGCCAATTGTCGAGCCTCCTACCAGACGGTCACCAGC
TGCCCTGCGGACAATTACCAGGCGTGTCTGGGCTCTTATGCTGGCATGATTGGGTTTGAC
ATGACACCTAACTATGTGGACTCCAGCCCCACTGGCATCGTGGTGTCCCCCTGGTGCAGC
TGTCGTGGCAGCGGGAACATGGAGGAGGAGTGTGAGAAGTTCCTCAGGGACTTCACCGAG
AACCCATGCCTCCGGAACGCCATCCAGGCCTTTGGCAACGGCACGGACGTGAACGTGTCC
CCAAAAGGCCCCTCGTTCCAGGCCACCCAGGCCCCTCGGGTGGAGAAGACGCCTTCTTTG
CCAGATGACCTCAGTGACAGTACCAGCTTGGGGACCAGTGTCATCACCACCTGCACGTCT
GTCCAGGAGCAGGGGCTGAAGGCCAACAACTCCAAAGAGTTAAGCATGTGCTTCACAGAG
CTCACGACAAATATCATCCCAGGGAGTAACAAGGTGATCAAACCTAACTCAGGCCCCAGC
AGAGCCAGACCGTCGGCTGCCTTGACCGTGCTGTCTGTCCTGATGCTGAAACTGGCCTTG
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC
AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA
AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA
TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC
CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC
CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG
TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA
CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC
GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC
AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG
CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA
AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA
AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA
CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT
ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT