ZNF552 ORF clone FXC11245

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Flexi ORF Clone FXC11245

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Clone info.

Species

human

Clone Name

pF1KE0708 Sequence (with vector) Restriction Map

Product ID

FXC11245

HaloTag Clone PID

FHC11245

ORF Sequence

DNA sequence (1221 bp)
Protein sequence (407 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528918]

Gene

KIEE0708

Symbol

ZNF552

Description

zinc finger protein 552

Original Clone ID

cs02208

Features of the cloned ORF sequence

Description

Length: 1221 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 407 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12963.1 3.3e-93 100.0 ZNF552 CCDS46212.1 5.4e-67 76.0 ZNF814 CCDS56109.1 8e-64 77.8 ZNF587B CCDS82410.1 3.3e-60 68.3 ZNF418 CCDS42642.1 4.5e-60 68.0 ZNF418 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001909 14 54 PF01352 Krueppel-associated box IPR007087 268 290 PF00096 Zinc finger IPR007087 296 318 PF00096 Zinc finger IPR007087 324 346 PF00096 Zinc finger IPR007087 352 374 PF00096 Zinc finger HMMSmart IPR001909 14 67 SM00349 Krueppel-associated box IPR015880 91 113 SM00355 Zinc finger IPR015880 212 232 SM00355 Zinc finger IPR015880 268 290 SM00355 Zinc finger IPR015880 296 318 SM00355 Zinc finger IPR015880 324 346 SM00355 Zinc finger IPR015880 352 374 SM00355 Zinc finger IPR015880 380 402 SM00355 Zinc finger ProfileScan IPR001909 14 90 PS50805 Krueppel-associated box IPR007087 119 146 PS50157 Zinc finger IPR007087 212 239 PS50157 Zinc finger IPR007087 244 267 PS50157 Zinc finger IPR007087 268 295 PS50157 Zinc finger IPR007087 296 323 PS50157 Zinc finger IPR007087 324 351 PS50157 Zinc finger IPR007087 352 379 PS50157 Zinc finger IPR007087 380 407 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005764 627 606956 54.1 99.8 NP_942152 564 601856 52.2 98.3 NP_006376 577 601856 52.3 96.3 NP_001252529 503 601856 50.7 88.2 NP_001252528 555 601856 50.1 86.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0708 Download

>KIEE0708  1221 bp
ATGGCGGCGGCCGCGCTAAGGTTCCCCGTTCAGGGCACAGTGACTTTTGAAGACGTGGCT
GTGAAATTTACCCAGGAGGAATGGAATCTCCTTAGTGAGGCTCAGAGATGCCTGTACCGT
GATGTGACGCTGGAGAACCTGGCACTTATGTCCTCCCTGGGTTGTTGGTGTGGAGTGGAA
GATGAGGCGGCACCTTCTAAGCAGAGTATTTATATACAAAGAGAGACTCAGGTCAGGACT
CCTATGGCAGGTGTGTCTCCCAAGAAGGCCCACCCCTGTGAGATGTGTGGCCCGATCTTG
GGAGACATTTTGCATGTGGCAGATCATCAGGGAACACATCACAAGCAGAAACTGCACAGG
TGTGAGGCCTGGGGGAATAAATTGTATGACAGTGGAAACTTTCATCAGCACCAGAATGAG
CACATTGGAGAGAAACCCTACAGAGGGAGTGTTGAGGAGGCGTTGTTTGCGAAGAGGTGT
AAGTTGCATGTGTCAGGGGAGTCATCTGTCTTCAGTGAGAGTGGGAAAGACTTTTTGCTC
AGGTCAGGATTACTCCAGCAAGAGGCCACTCACACTGGGAAGTCAAACAGCAAAACTGAG
TGTGTGTCTCTGTTTCATGGGGGAAAAAGCCATTACAGCTGTGGAGGATGCATGAAACAT
TTTAGCACCAAAGATATACTCAGTCAGCACGAGAGACTGCTCCCTACAGAAGAACCTTCT
GTGTGGTGTGAATGTGGGAAATCCTCTAGCAAATATGACAGCTTCAGTAATCATCAAGGA
GTTCACACTAGAGAAAAACCTTATACGTGTGGGATATGTGGGAAATTATTTAACAGTAAG
TCCCACCTCCTTGTACACCAGAGAATTCACACTGGAGAGAAGCCATATGAGTGTGAGGTT
TGTCAGAAATTTTTTAGGCACAAGTACCACCTCATTGCACACCAGAGAGTTCACACTGGA
GAAAGGCCATATGAATGCAGTGATTGTGGGAAGTCATTTACCCACAGCTCTACATTCCGT
GTTCATAAGAGAGTTCACACTGGTCAGAAGCCTTATGAGTGCAGTGAATGTGGGAAATCT
TTTGCCGAAAGCTCCAGTCTCACTAAACACAGGAGAGTTCACACTGGAGAAAAGCCTTAC
GGGTGCAGTGAATGTGAAAAAAAATTTAGGCAAATCTCTTCACTTCGTCATCATCAGAGA
GTTCACAAAAGAAAGGGCTTA

ORF Protein

Cloned ORF protein sequence for pF1KE0708 Download

>KIEE0708  407 aa
MAAAALRFPVQGTVTFEDVAVKFTQEEWNLLSEAQRCLYRDVTLENLALMSSLGCWCGVE
DEAAPSKQSIYIQRETQVRTPMAGVSPKKAHPCEMCGPILGDILHVADHQGTHHKQKLHR
CEAWGNKLYDSGNFHQHQNEHIGEKPYRGSVEEALFAKRCKLHVSGESSVFSESGKDFLL
RSGLLQQEATHTGKSNSKTECVSLFHGGKSHYSCGGCMKHFSTKDILSQHERLLPTEEPS
VWCECGKSSSKYDSFSNHQGVHTREKPYTCGICGKLFNSKSHLLVHQRIHTGEKPYECEV
CQKFFRHKYHLIAHQRVHTGERPYECSDCGKSFTHSSTFRVHKRVHTGQKPYECSECGKS
FAESSSLTKHRRVHTGEKPYGCSECEKKFRQISSLRHHQRVHKRKGL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0708 Download

>pF1KE0708  4334 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCGGCC
GCGCTAAGGTTCCCCGTTCAGGGCACAGTGACTTTTGAAGACGTGGCTGTGAAATTTACC
CAGGAGGAATGGAATCTCCTTAGTGAGGCTCAGAGATGCCTGTACCGTGATGTGACGCTG
GAGAACCTGGCACTTATGTCCTCCCTGGGTTGTTGGTGTGGAGTGGAAGATGAGGCGGCA
CCTTCTAAGCAGAGTATTTATATACAAAGAGAGACTCAGGTCAGGACTCCTATGGCAGGT
GTGTCTCCCAAGAAGGCCCACCCCTGTGAGATGTGTGGCCCGATCTTGGGAGACATTTTG
CATGTGGCAGATCATCAGGGAACACATCACAAGCAGAAACTGCACAGGTGTGAGGCCTGG
GGGAATAAATTGTATGACAGTGGAAACTTTCATCAGCACCAGAATGAGCACATTGGAGAG
AAACCCTACAGAGGGAGTGTTGAGGAGGCGTTGTTTGCGAAGAGGTGTAAGTTGCATGTG
TCAGGGGAGTCATCTGTCTTCAGTGAGAGTGGGAAAGACTTTTTGCTCAGGTCAGGATTA
CTCCAGCAAGAGGCCACTCACACTGGGAAGTCAAACAGCAAAACTGAGTGTGTGTCTCTG
TTTCATGGGGGAAAAAGCCATTACAGCTGTGGAGGATGCATGAAACATTTTAGCACCAAA
GATATACTCAGTCAGCACGAGAGACTGCTCCCTACAGAAGAACCTTCTGTGTGGTGTGAA
TGTGGGAAATCCTCTAGCAAATATGACAGCTTCAGTAATCATCAAGGAGTTCACACTAGA
GAAAAACCTTATACGTGTGGGATATGTGGGAAATTATTTAACAGTAAGTCCCACCTCCTT
GTACACCAGAGAATTCACACTGGAGAGAAGCCATATGAGTGTGAGGTTTGTCAGAAATTT
TTTAGGCACAAGTACCACCTCATTGCACACCAGAGAGTTCACACTGGAGAAAGGCCATAT
GAATGCAGTGATTGTGGGAAGTCATTTACCCACAGCTCTACATTCCGTGTTCATAAGAGA
GTTCACACTGGTCAGAAGCCTTATGAGTGCAGTGAATGTGGGAAATCTTTTGCCGAAAGC
TCCAGTCTCACTAAACACAGGAGAGTTCACACTGGAGAAAAGCCTTACGGGTGCAGTGAA
TGTGAAAAAAAATTTAGGCAAATCTCTTCACTTCGTCATCATCAGAGAGTTCACAAAAGA
AAGGGCTTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGC
AGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGC
CACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTT
TTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAG
CTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCT
TGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGC
TTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGA
GCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTA
AACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAA
GAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCG
GCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCT
GATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGAC
CTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACG
ACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTG
CTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAA
GTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCA
TTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTT
GTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCC
AGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGC
TTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTG
GGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTT
GGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAG
CGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAA
TGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATC
CACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAG
GAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCA
TCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCA
GGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGG
ATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAG
GTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGT
TCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACA
CGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGG
CGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATT
TGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATC
CGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCG
CAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTG
GAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTA
GATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGT
GAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTC
TGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGG
GTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGG
TGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGA
TAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCT
GATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAG
TAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGA
TGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAA
AGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC
TGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGT
GGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGA
CGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCAT