SASH3 ORF clone FXC11214

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Flexi ORF Clone FXC11214

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Clone info.

Species

human

Clone Name

pF1KE0646 Sequence (with vector) Restriction Map

Product ID

FXC11214

HaloTag Clone PID

FHC11214

ORF Sequence

DNA sequence (1140 bp)
Protein sequence (380 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528892]

Gene

KIEE0646

Symbol

SASH3

Alias : 753P9, CXorf9, HACS2, SH3D6C, SLY

Description

SAM and SH3 domain containing 3

Original Clone ID

cs02146

Features of the cloned ORF sequence

Description

Length: 1140 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 380 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14614.1 8.5e-117 100.0 SASH3 CCDS5212.1 1.8e-34 45.6 SASH1 CCDS42906.1 2.9e-34 45.7 SAMSN1 CCDS58786.1 5.8e-34 44.7 SAMSN1 CCDS74774.1 3.9e-31 47.5 SAMSN1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021090 19 174 PF12485 SAM/SH3 domain-containing IPR011511 177 229 PF07653 Variant SH3 IPR011510 253 313 PF07647 Sterile alpha motif HMMSmart IPR001452 176 233 SM00326 Src homology-3 domain IPR001660 249 316 SM00454 Sterile alpha motif domain ProfileScan IPR001660 252 316 PS50105 Sterile alpha motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_061863 380 300441 100.0 100.0 XP_006724826 430 300441 87.9 95.3 NP_001333436 1008 607955 45.6 88.9 NP_001333435 1123 607955 45.6 88.9 NP_001333434 1202 607955 45.6 88.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0646 Download

>KIEE0646  1140 bp
ATGCTGCGCCGCAAGCCCTCCAATGCCAGTGAGAAGGAGCCCACTCAGAAGAAAAAGCTC
TCCCTTCAGCGCTCCAGCAGCTTCAAGGATTTTGCCAAATCCAAACCCAGCTCCCCCGTG
GTGAGCGAGAAGGAGTTTAATCTGGATGATAACATTCCAGAAGATGACTCAGGTGTCCCC
ACCCCAGAAGATGCTGGGAAGAGTGGCAAAAAGCTGGGGAAGAAGTGGAGGGCAGTGATT
TCCCGAACCATGAACAGGAAGATGGGCAAGATGATGGTGAAGGCCCTGTCAGAAGAGATG
GCAGACACTCTGGAGGAGGGCTCTGCCTCCCCGACATCTCCAGACTACAGCCTGGACAGC
CCTGGCCCTGAGAAGATGGCGCTGGCCTTTTCTGAGCAAGAGGAGCATGAACTTCCGGTG
CTCAGCCGCCAGGCATCAACAGGCAGTGAGCTCTGCAGCCCCAGCCCAGGTTCTGGCAGC
TTCGGGGAGGAACCACCTGCCCCCCAGTACACAGGGCCTTTCTGTGGCCGGGCACGAGTC
CACACCGACTTCACTCCCAGCCCCTATGACCACGACTCGCTGAAACTGCAGAAAGGAGAT
GTGATCCAGATCATTGAAAAGCCACCTGTGGGCACGTGGCTGGGCCTACTCAATGGCAAG
GTGGGCTCTTTCAAATTCATCTATGTGGATGTGCTGCCCGAGGAGGCCGTGGGGCATGCC
CGCCCCAGCCGCCGACAGAGCAAGGGCAAGAGGCCCAAGCCTAAGACCCTGCATGAGCTG
CTGGAGCGCATCGGCCTGGAGGAGCACACATCCACCCTCCTGCTCAATGGCTACCAGACA
CTGGAAGACTTCAAAGAGCTGCGAGAAACACACCTCAATGAGCTGAACATCATGGATCCA
CAGCACCGGGCCAAGCTGCTCACGGCCGCCGAGCTGCTGCTGGACTATGACACTGGCAGT
GAGGAGGCTGAAGAGGGCGCCGAGAGCAGCCAGGAGCCAGTGGCACACACAGTGTCGGAA
CCCAAGGTGGACATCCCGCGCGACTCAGGCTGCTTTGAGGGCTCGGAGAGCGGGCGCGAT
GACGCAGAGCTGGCAGGCACTGAGGAGCAGCTGCAAGGCCTCTCCCTGGCCGGGGCACCT

ORF Protein

Cloned ORF protein sequence for pF1KE0646 Download

>KIEE0646  380 aa
MLRRKPSNASEKEPTQKKKLSLQRSSSFKDFAKSKPSSPVVSEKEFNLDDNIPEDDSGVP
TPEDAGKSGKKLGKKWRAVISRTMNRKMGKMMVKALSEEMADTLEEGSASPTSPDYSLDS
PGPEKMALAFSEQEEHELPVLSRQASTGSELCSPSPGSGSFGEEPPAPQYTGPFCGRARV
HTDFTPSPYDHDSLKLQKGDVIQIIEKPPVGTWLGLLNGKVGSFKFIYVDVLPEEAVGHA
RPSRRQSKGKRPKPKTLHELLERIGLEEHTSTLLLNGYQTLEDFKELRETHLNELNIMDP
QHRAKLLTAAELLLDYDTGSEEAEEGAESSQEPVAHTVSEPKVDIPRDSGCFEGSESGRD
DAELAGTEEQLQGLSLAGAP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0646 Download

>pF1KE0646  4253 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGCGCCGC
AAGCCCTCCAATGCCAGTGAGAAGGAGCCCACTCAGAAGAAAAAGCTCTCCCTTCAGCGC
TCCAGCAGCTTCAAGGATTTTGCCAAATCCAAACCCAGCTCCCCCGTGGTGAGCGAGAAG
GAGTTTAATCTGGATGATAACATTCCAGAAGATGACTCAGGTGTCCCCACCCCAGAAGAT
GCTGGGAAGAGTGGCAAAAAGCTGGGGAAGAAGTGGAGGGCAGTGATTTCCCGAACCATG
AACAGGAAGATGGGCAAGATGATGGTGAAGGCCCTGTCAGAAGAGATGGCAGACACTCTG
GAGGAGGGCTCTGCCTCCCCGACATCTCCAGACTACAGCCTGGACAGCCCTGGCCCTGAG
AAGATGGCGCTGGCCTTTTCTGAGCAAGAGGAGCATGAACTTCCGGTGCTCAGCCGCCAG
GCATCAACAGGCAGTGAGCTCTGCAGCCCCAGCCCAGGTTCTGGCAGCTTCGGGGAGGAA
CCACCTGCCCCCCAGTACACAGGGCCTTTCTGTGGCCGGGCACGAGTCCACACCGACTTC
ACTCCCAGCCCCTATGACCACGACTCGCTGAAACTGCAGAAAGGAGATGTGATCCAGATC
ATTGAAAAGCCACCTGTGGGCACGTGGCTGGGCCTACTCAATGGCAAGGTGGGCTCTTTC
AAATTCATCTATGTGGATGTGCTGCCCGAGGAGGCCGTGGGGCATGCCCGCCCCAGCCGC
CGACAGAGCAAGGGCAAGAGGCCCAAGCCTAAGACCCTGCATGAGCTGCTGGAGCGCATC
GGCCTGGAGGAGCACACATCCACCCTCCTGCTCAATGGCTACCAGACACTGGAAGACTTC
AAAGAGCTGCGAGAAACACACCTCAATGAGCTGAACATCATGGATCCACAGCACCGGGCC
AAGCTGCTCACGGCCGCCGAGCTGCTGCTGGACTATGACACTGGCAGTGAGGAGGCTGAA
GAGGGCGCCGAGAGCAGCCAGGAGCCAGTGGCACACACAGTGTCGGAACCCAAGGTGGAC
ATCCCGCGCGACTCAGGCTGCTTTGAGGGCTCGGAGAGCGGGCGCGATGACGCAGAGCTG
GCAGGCACTGAGGAGCAGCTGCAAGGCCTCTCCCTGGCCGGGGCACCTGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT