GJC3 ORF clone FXC11179

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Flexi ORF Clone FXC11179

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Clone info.

Species

human

Clone Name

pF1KE0579 Sequence (with vector) Restriction Map

Product ID

FXC11179

HaloTag Clone PID

FHC11179

ORF Sequence

DNA sequence (837 bp)
Protein sequence (279 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528858]

Gene

KIEE0579

Symbol

GJC3

Alias : CX29, CX30.2, CX31.3, GJE1

Description

gap junction protein, gamma 3, 30.2kDa

Original Clone ID

oc01279

Features of the cloned ORF sequence

Description

Length: 837 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 279 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34697.1 8.3e-129 100.0 GJC3 CCDS9290.1 2.2e-26 36.8 GJB2 CCDS14408.1 1.1e-25 36.0 GJB1 CCDS9291.1 4.7e-25 28.8 GJB6 CCDS58547.1 7.1e-25 32.6 GJD3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000500 20 44 PR00206 Connexin IPR000500 51 73 PR00206 Connexin IPR000500 76 96 PR00206 Connexin IPR000500 133 159 PR00206 Connexin IPR000500 169 189 PR00206 Connexin IPR000500 190 213 PR00206 Connexin HMMPfam IPR013092 5 99 PF00029 Connexin IPR019570 147 213 PF10582 Gap junction protein HMMSmart IPR013092 42 75 SM00037 Connexin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 19 PVGRLLLPVLLGFRLVLLAASG 40 SECONDARY 22 2 75 RFWVFQVILVAVPSALYMGFTLY 97 PRIMARY 23 3 128 AGSLRLLWAYVAQLGARLVLEGA 150 SECONDARY 23 4 192 LKTMFGVSGFCLLFTFLELVLLG 214 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_853516 279 611925 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0579 Download

>KIEE0579  837 bp
ATGTGTGGCAGGTTCCTGCGGCGGCTGCTGGCGGAGGAGAGCCGGCGCTCCACCCCCGTG
GGGCGCCTCTTGCTTCCCGTGCTCCTGGGATTCCGCCTTGTGCTGCTGGCTGCCAGTGGG
CCTGGAGTCTATGGTGATGAGCAGAGTGAATTCGTGTGTCACACCCAGCAGCCGGGCTGC
AAGGCTGCCTGCTTCGATGCCTTCCACCCCCTCTCCCCGCTGCGTTTCTGGGTCTTCCAG
GTCATCTTGGTGGCTGTACCCAGCGCCCTCTATATGGGTTTCACTCTGTATCACGTGATC
TGGCACTGGGAATTATCAGGAAAGGGGAAGGAGGAGGAGACCCTGATCCAGGGACGGGAG
GGCAACACAGATGTCCCAGGGGCTGGAAGCCTCAGGCTGCTCTGGGCTTATGTGGCTCAG
CTGGGGGCTCGGCTTGTCCTGGAGGGGGCAGCCCTGGGGTTGCAGTACCACCTGTATGGG
TTCCAGATGCCCAGCTCCTTTGCATGTCGCCGAGAACCTTGCCTTGGTAGTATAACCTGC
AATCTGTCCCGCCCCTCTGAGAAGACCATTTTCCTAAAGACCATGTTTGGAGTCAGCGGT
TTCTGTCTCTTGTTTACTTTTTTGGAGCTTGTGCTTCTGGGTTTGGGGAGATGGTGGAGG
ACCTGGAAGCACAAATCTTCCTCTTCTAAATACTTCCTAACTTCAGAGAGCACCAGAAGA
CACAAGAAAGCAACCGATAGCCTCCCAGTGGTGGAAACCAAAGAGCAATTTCAAGAAGCA
GTTCCAGGAAGAAGCTTAGCCCAGGAAAAACAAAGACCAGTTGGACCCAGAGATGCC

ORF Protein

Cloned ORF protein sequence for pF1KE0579 Download

>KIEE0579  279 aa
MCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGC
KAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGRE
GNTDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITC
NLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKYFLTSESTRR
HKKATDSLPVVETKEQFQEAVPGRSLAQEKQRPVGPRDA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0579 Download

>pF1KE0579  3950 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTGTGGCAGG
TTCCTGCGGCGGCTGCTGGCGGAGGAGAGCCGGCGCTCCACCCCCGTGGGGCGCCTCTTG
CTTCCCGTGCTCCTGGGATTCCGCCTTGTGCTGCTGGCTGCCAGTGGGCCTGGAGTCTAT
GGTGATGAGCAGAGTGAATTCGTGTGTCACACCCAGCAGCCGGGCTGCAAGGCTGCCTGC
TTCGATGCCTTCCACCCCCTCTCCCCGCTGCGTTTCTGGGTCTTCCAGGTCATCTTGGTG
GCTGTACCCAGCGCCCTCTATATGGGTTTCACTCTGTATCACGTGATCTGGCACTGGGAA
TTATCAGGAAAGGGGAAGGAGGAGGAGACCCTGATCCAGGGACGGGAGGGCAACACAGAT
GTCCCAGGGGCTGGAAGCCTCAGGCTGCTCTGGGCTTATGTGGCTCAGCTGGGGGCTCGG
CTTGTCCTGGAGGGGGCAGCCCTGGGGTTGCAGTACCACCTGTATGGGTTCCAGATGCCC
AGCTCCTTTGCATGTCGCCGAGAACCTTGCCTTGGTAGTATAACCTGCAATCTGTCCCGC
CCCTCTGAGAAGACCATTTTCCTAAAGACCATGTTTGGAGTCAGCGGTTTCTGTCTCTTG
TTTACTTTTTTGGAGCTTGTGCTTCTGGGTTTGGGGAGATGGTGGAGGACCTGGAAGCAC
AAATCTTCCTCTTCTAAATACTTCCTAACTTCAGAGAGCACCAGAAGACACAAGAAAGCA
ACCGATAGCCTCCCAGTGGTGGAAACCAAAGAGCAATTTCAAGAAGCAGTTCCAGGAAGA
AGCTTAGCCCAGGAAAAACAAAGACCAGTTGGACCCAGAGATGCCGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT