TRIM68 ORF clone FXC10707

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Flexi ORF Clone FXC10707

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Clone info.

Species

human

Clone Name

pF1KE0026 Sequence (with vector) Restriction Map

Product ID

FXC10707

HaloTag Clone PID

FHC10707

ORF Sequence

DNA sequence (1455 bp)
Protein sequence (485 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527317]

Gene

KIEE0026

Symbol

TRIM68

Alias : GC109, RNF137, SS-56, SS56

Description

tripartite motif containing 68, transcript variant 1

Original Clone ID

oc00726

Features of the cloned ORF sequence

Description

Length: 1455 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 485 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31356.1 2.5e-139 100.0 TRIM68 CCDS34378.1 6e-43 38.1 TRIM39 CCDS3808.1 1.4e-31 34.6 TRIM60 CCDS1571.1 9.3e-31 36.6 TRIM17 CCDS31048.1 1.2e-30 42.7 TRIM11 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 301 318 PR01407 Butyrophylin-like IPR003879 318 335 PR01407 Butyrophylin-like IPR003879 340 364 PR01407 Butyrophylin-like IPR003879 370 383 PR01407 Butyrophylin-like IPR003879 414 438 PR01407 Butyrophylin-like IPR003879 446 464 PR01407 Butyrophylin-like HMMPfam IPR018957 16 60 PF00097 Zinc finger IPR000315 96 134 PF00643 Zinc finger IPR003877 355 466 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 16 60 SM00184 Zinc finger IPR000315 93 134 SM00336 Zinc finger IPR006574 302 354 SM00589 SPRY-associated IPR018355 355 482 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 16 61 PS50089 Zinc finger IPR000315 93 134 PS50119 Zinc finger IPR001870 285 481 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060543 485 613184 100.0 100.0 NP_742013 488 605700 38.1 97.7 XP_016857901 467 607868 42.7 99.6 XP_011542512 477 606123 36.6 99.2 NP_057186 477 606123 36.6 99.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0026 Download

>KIEE0026  1455 bp
ATGGATCCCACAGCCTTGGTGGAAGCCATTGTGGAAGAAGTGGCCTGTCCCATCTGTATG
ACCTTCCTGAGGGAGCCCATGAGCATTGACTGTGGCCACAGCTTCTGCCACAGCTGTCTC
TCTGGACTCTGGGAGATCCCAGGAGAATCCCAGAACTGGGGTTACACCTGTCCCCTCTGT
CGAGCTCCTGTCCAGCCAAGGAACCTGCGGCCTAATTGGCAGCTGGCCAATGTTGTAGAA
AAAGTCCGTCTGCTAAGGCTACATCCAGGAATGGGGCTGAAGGGTGACCTGTGTGAGCGC
CATGGGGAAAAGCTGAAGATGTTCTGCAAAGAGGATGTCTTGATAATGTGTGAGGCCTGC
AGCCAGTCCCCAGAGCATGAGGCCCACAGTGTTGTGCCAATGGAGGATGTTGCCTGGGAG
TACAAGTGGGAACTTCATGAGGCCCTCGAACATCTGAAGAAAGAGCAAGAAGAGGCCTGG
AAGCTTGAAGTTGGTGAAAGGAAACGAACTGCCACCTGGAAGATACAGGTGGAAACCCGA
AAACAGAGTATTGTATGGGAGTTTGAAAAATACCAGCGATTACTAGAGAAAAAGCAGCCA
CCACATCGGCAGCTGGGGGCAGAGGTAGCAGCAGCTCTGGCCAGCCTACAGCGGGAGGCA
GCGGAGACCATGCAGAAACTGGAGTTGAACCATAGCGAGCTCATCCAGCAGAGCCAGGTC
CTGTGGAGGATGATTGCAGAGTTGAAAGAGAGGTCGCAGAGGCCTGTCCGCTGGATGTTG
CAGGATATTCAGGAAGTGTTAAACAGGAGCAAATCTTGGAGCTTGCAGCAGCCAGAACCA
ATCTCCCTGGAGTTGAAGACAGATTGCCGTGTACTGGGGCTAAGAGAGATCCTGAAGACT
TATGCAGCTGATGTGCGCTTGGATCCAGATACTGCTTACTCCCGTCTCATCGTGTCTGAG
GACAGAAAACGTGTGCACTATGGAGACACCAACCAGAAACTGCCAGACAATCCTGAGAGA
TTTTACCGCTATAATATCGTCCTGGGAAGCCAGTGCATCTCCTCAGGCCGGCACTACTGG
GAGGTGGAGGTGGGAGACAGGTCTGAGTGGGGCCTGGGAGTATGTAAGCAAAATGTAGAC
CGGAAGGAGGTGGTCTACTTATCCCCCCACTATGGATTCTGGGTGATAAGGCTGAGGAAG
GGAAATGAGTACCGAGCAGGCACCGATGAGTACCCAATCCTGTCCTTGCCGGTCCCTCCT
CGCCGGGTGGGAATCTTCGTGGATTATGAGGCCCATGACATTTCTTTCTACAATGTGACT
GACTGTGGCTCCCACATCTTCACTTTCCCCCGCTATCCCTTCCCTGGGCGCCTCCTGCCC
TATTTTAGTCCTTGCTACAGCATTGGAACCAACAACACTGCTCCTCTGGCCATCTGCTCC
CTGGATGGGGAGGAC

ORF Protein

Cloned ORF protein sequence for pF1KE0026 Download

>KIEE0026  485 aa
MDPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLC
RAPVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEAC
SQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETR
KQSIVWEFEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSELIQQSQV
LWRMIAELKERSQRPVRWMLQDIQEVLNRSKSWSLQQPEPISLELKTDCRVLGLREILKT
YAADVRLDPDTAYSRLIVSEDRKRVHYGDTNQKLPDNPERFYRYNIVLGSQCISSGRHYW
EVEVGDRSEWGLGVCKQNVDRKEVVYLSPHYGFWVIRLRKGNEYRAGTDEYPILSLPVPP
RRVGIFVDYEAHDISFYNVTDCGSHIFTFPRYPFPGRLLPYFSPCYSIGTNNTAPLAICS
LDGED

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0026 Download

>pF1KE0026  4568 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGATCCCACA
GCCTTGGTGGAAGCCATTGTGGAAGAAGTGGCCTGTCCCATCTGTATGACCTTCCTGAGG
GAGCCCATGAGCATTGACTGTGGCCACAGCTTCTGCCACAGCTGTCTCTCTGGACTCTGG
GAGATCCCAGGAGAATCCCAGAACTGGGGTTACACCTGTCCCCTCTGTCGAGCTCCTGTC
CAGCCAAGGAACCTGCGGCCTAATTGGCAGCTGGCCAATGTTGTAGAAAAAGTCCGTCTG
CTAAGGCTACATCCAGGAATGGGGCTGAAGGGTGACCTGTGTGAGCGCCATGGGGAAAAG
CTGAAGATGTTCTGCAAAGAGGATGTCTTGATAATGTGTGAGGCCTGCAGCCAGTCCCCA
GAGCATGAGGCCCACAGTGTTGTGCCAATGGAGGATGTTGCCTGGGAGTACAAGTGGGAA
CTTCATGAGGCCCTCGAACATCTGAAGAAAGAGCAAGAAGAGGCCTGGAAGCTTGAAGTT
GGTGAAAGGAAACGAACTGCCACCTGGAAGATACAGGTGGAAACCCGAAAACAGAGTATT
GTATGGGAGTTTGAAAAATACCAGCGATTACTAGAGAAAAAGCAGCCACCACATCGGCAG
CTGGGGGCAGAGGTAGCAGCAGCTCTGGCCAGCCTACAGCGGGAGGCAGCGGAGACCATG
CAGAAACTGGAGTTGAACCATAGCGAGCTCATCCAGCAGAGCCAGGTCCTGTGGAGGATG
ATTGCAGAGTTGAAAGAGAGGTCGCAGAGGCCTGTCCGCTGGATGTTGCAGGATATTCAG
GAAGTGTTAAACAGGAGCAAATCTTGGAGCTTGCAGCAGCCAGAACCAATCTCCCTGGAG
TTGAAGACAGATTGCCGTGTACTGGGGCTAAGAGAGATCCTGAAGACTTATGCAGCTGAT
GTGCGCTTGGATCCAGATACTGCTTACTCCCGTCTCATCGTGTCTGAGGACAGAAAACGT
GTGCACTATGGAGACACCAACCAGAAACTGCCAGACAATCCTGAGAGATTTTACCGCTAT
AATATCGTCCTGGGAAGCCAGTGCATCTCCTCAGGCCGGCACTACTGGGAGGTGGAGGTG
GGAGACAGGTCTGAGTGGGGCCTGGGAGTATGTAAGCAAAATGTAGACCGGAAGGAGGTG
GTCTACTTATCCCCCCACTATGGATTCTGGGTGATAAGGCTGAGGAAGGGAAATGAGTAC
CGAGCAGGCACCGATGAGTACCCAATCCTGTCCTTGCCGGTCCCTCCTCGCCGGGTGGGA
ATCTTCGTGGATTATGAGGCCCATGACATTTCTTTCTACAATGTGACTGACTGTGGCTCC
CACATCTTCACTTTCCCCCGCTATCCCTTCCCTGGGCGCCTCCTGCCCTATTTTAGTCCT
TGCTACAGCATTGGAACCAACAACACTGCTCCTCTGGCCATCTGCTCCCTGGATGGGGAG
GACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT