TMED1 ORF clone FXC09791

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Flexi ORF Clone FXC09791

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Clone info.

Species

human

Clone Name

pF1KB6922 Sequence (with vector) Restriction Map

Product ID

FXC09791

HaloTag Clone PID

FHC09791

ORF Sequence

DNA sequence (681 bp)
Protein sequence (227 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528501]

Gene

KIBB6922

Symbol

TMED1

Alias : IL1RL1LG, Il1rl1l, Tp24, p24g1

Description

transmembrane p24 trafficking protein 1, transcript variant 1

Original Clone ID

cs01522

Features of the cloned ORF sequence

Description

Length: 681 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 227 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12249.1 6e-93 100.0 TMED1 CCDS743.1 2.6e-48 58.1 TMED5 CCDS53342.1 6.8e-31 57.9 TMED5 CCDS54888.1 3.7e-11 33.7 TICAM2 CCDS4120.1 4.3e-11 35.6 TMED7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR009038 34 220 PF01105 GOLD ProfileScan IPR009038 43 125 PS50866 GOLD
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MMAAGAALALALWLLMPPVEVGG 23 PRIMARY 23 2 194 NFWSAVNVAVLLLVAVLQVCTL 215 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006849 227 605395 100.0 100.0 NP_057124 229 616876 58.1 91.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6922 Download

>KIBB6922  681 bp
ATGATGGCGGCCGGCGCGGCCCTAGCCCTGGCCTTGTGGCTACTAATGCCACCAGTGGAG
GTGGGAGGGGCGGGGCCCCCGCCAATCCAGGACGGTGAGTTCACGTTCCTGTTGCCGGCG
GGGAGGAAGCAGTGTTTCTACCAGTCCGCGCCGGCCAACGCAAGCCTCGAGACCGAATAC
CAGGTGATCGGAGGTGCTGGACTGGACGTGGACTTCACGCTGGAGAGCCCTCAGGGCGTG
CTGTTGGTCAGCGAGTCCCGCAAGGCTGATGGGGTACACACGGTGGAGCCAACGGAGGCC
GGGGACTACAAGCTGTGCTTTGACAACTCCTTCAGCACCATCTCCGAGAAGCTGGTGTTC
TTTGAACTGATCTTTGACAGCCTCCAGGATGACGAGGAGGTCGAAGGATGGGCAGAGGCT
GTGGAGCCCGAGGAGATGCTGGATGTTAAAATGGAGGACATCAAGGAGTCCATTGAGACC
ATGCGGACCCGGCTGGAGCGCAGCATCCAGATGCTCACGCTACTGCGGGCCTTCGAGGCA
CGTGACCGCAACCTGCAAGAGGGCAACTTGGAGCGGGTCAACTTCTGGTCAGCTGTCAAC
GTGGCGGTGCTGCTGCTGGTGGCTGTGCTGCAGGTCTGCACGCTCAAGCGCTTCTTCCAG
GACAAGCGCCCGGTGCCCACG

ORF Protein

Cloned ORF protein sequence for pF1KB6922 Download

>KIBB6922  227 aa
MMAAGAALALALWLLMPPVEVGGAGPPPIQDGEFTFLLPAGRKQCFYQSAPANASLETEY
QVIGGAGLDVDFTLESPQGVLLVSESRKADGVHTVEPTEAGDYKLCFDNSFSTISEKLVF
FELIFDSLQDDEEVEGWAEAVEPEEMLDVKMEDIKESIETMRTRLERSIQMLTLLRAFEA
RDRNLQEGNLERVNFWSAVNVAVLLLVAVLQVCTLKRFFQDKRPVPT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6922 Download

>pF1KB6922  3794 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGGCGGCC
GGCGCGGCCCTAGCCCTGGCCTTGTGGCTACTAATGCCACCAGTGGAGGTGGGAGGGGCG
GGGCCCCCGCCAATCCAGGACGGTGAGTTCACGTTCCTGTTGCCGGCGGGGAGGAAGCAG
TGTTTCTACCAGTCCGCGCCGGCCAACGCAAGCCTCGAGACCGAATACCAGGTGATCGGA
GGTGCTGGACTGGACGTGGACTTCACGCTGGAGAGCCCTCAGGGCGTGCTGTTGGTCAGC
GAGTCCCGCAAGGCTGATGGGGTACACACGGTGGAGCCAACGGAGGCCGGGGACTACAAG
CTGTGCTTTGACAACTCCTTCAGCACCATCTCCGAGAAGCTGGTGTTCTTTGAACTGATC
TTTGACAGCCTCCAGGATGACGAGGAGGTCGAAGGATGGGCAGAGGCTGTGGAGCCCGAG
GAGATGCTGGATGTTAAAATGGAGGACATCAAGGAGTCCATTGAGACCATGCGGACCCGG
CTGGAGCGCAGCATCCAGATGCTCACGCTACTGCGGGCCTTCGAGGCACGTGACCGCAAC
CTGCAAGAGGGCAACTTGGAGCGGGTCAACTTCTGGTCAGCTGTCAACGTGGCGGTGCTG
CTGCTGGTGGCTGTGCTGCAGGTCTGCACGCTCAAGCGCTTCTTCCAGGACAAGCGCCCG
GTGCCCACGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGC
AGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGC
CACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTT
TTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAG
CTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCT
TGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGC
TTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGA
GCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTA
AACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAA
GAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCG
GCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCT
GATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGAC
CTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACG
ACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTG
CTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAA
GTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCA
TTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTT
GTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCC
AGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGC
TTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTG
GGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTT
GGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAG
CGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAA
TGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATC
CACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAG
GAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCA
TCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCA
GGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGG
ATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAG
GTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGT
TCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACA
CGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGG
CGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATT
TGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATC
CGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCG
CAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTG
GAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTA
GATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGT
GAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTC
TGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGG
GTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGG
TGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGA
TAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCT
GATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAG
TAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGA
TGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAA
AGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC
TGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGT
GGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGA
CGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCAT