RNF138 ORF clone FXC08938

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Flexi ORF Clone FXC08938

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Clone info.

Species

human

Clone Name

pF1KB6978 Sequence (with vector) Restriction Map

Product ID

FXC08938

HaloTag Clone PID

FHC08938

ORF Sequence

DNA sequence (735 bp)
Protein sequence (245 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528421]

Gene

KIBB6978

Symbol

RNF138

Alias : HSD-4, NARF, STRIN, hNARF

Description

ring finger protein 138, E3 ubiquitin protein ligase, transcript variant 1

Original Clone ID

cs01578

Features of the cloned ORF sequence

Description

Length: 735 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 245 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11903.1 1.5e-69 100.0 RNF138 CCDS11904.1 2.5e-29 61.6 RNF138 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004181 17 58 PF02891 Zinc finger HMMSmart IPR001841 18 57 SM00184 Zinc finger IPR001841 159 192 SM00184 Zinc finger ProfileScan IPR001841 18 58 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057355 245 616319 100.0 100.0 NP_001178253 245 616319 100.0 100.0 XP_005258342 199 616319 100.0 81.2 NP_937761 151 616319 61.6 100.0 XP_005258343 151 616319 61.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6978 Download

>KIBB6978  735 bp
ATGGCCGAGGACCTCTCTGCGGCCACGTCCTACACCGAAGATGATTTCTACTGCCCCGTC
TGTCAGGAGGTGCTCAAAACGCCCGTGCGGACCACGGCCTGTCAGCACGTTTTCTGTAGA
AAATGTTTCCTGACTGCAATGAGGGAAAGCGGAGCACATTGTCCCCTATGTCGTGGAAAT
GTGACTAGAAGAGAGAGAGCATGTCCTGAACGGGCCTTAGACCTTGAAAATATAATGAGG
AAGTTTTCTGGTAGCTGCAGATGCTGTGCAAAACAGATTAAATTCTATCGCATGAGACAT
CATTACAAATCTTGTAAGAAGTATCAGGATGAATATGGTGTTTCTTCTATCATTCCAAAC
TTTCAGATCTCTCAAGATTCAGTAGGGAACAGCAATAGGAGTGAAACATCCACATCTGAT
AACACAGAAACTTACCAAGAGAATACAAGTTCTTCTGGTCATCCTACTTTTAAGTGTCCC
CTGTGTCAAGAATCAAATTTTACCAGACAGCGTTTACTGGATCACTGTAACAGTAATCAC
CTATTTCAGATAGTTCCTGTGACATGTCCTATTTGTGTGTCTCTTCCTTGGGGAGATCCT
AGCCAGATTACCAGAAATTTCGTTAGTCATCTAAATCAGAGACATCAATTTGATTATGGA
GAATTTGTGAATCTTCAGCTAGATGAAGAAACCCAATACCAAACTGCTGTTGAAGAATCT
TTTCAAGTAAACATC

ORF Protein

Cloned ORF protein sequence for pF1KB6978 Download

>KIBB6978  245 aa
MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGN
VTRRERACPERALDLENIMRKFSGSCRCCAKQIKFYRMRHHYKSCKKYQDEYGVSSIIPN
FQISQDSVGNSNRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNH
LFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQFDYGEFVNLQLDEETQYQTAVEES
FQVNI

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6978 Download

>pF1KB6978  3848 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCGAGGAC
CTCTCTGCGGCCACGTCCTACACCGAAGATGATTTCTACTGCCCCGTCTGTCAGGAGGTG
CTCAAAACGCCCGTGCGGACCACGGCCTGTCAGCACGTTTTCTGTAGAAAATGTTTCCTG
ACTGCAATGAGGGAAAGCGGAGCACATTGTCCCCTATGTCGTGGAAATGTGACTAGAAGA
GAGAGAGCATGTCCTGAACGGGCCTTAGACCTTGAAAATATAATGAGGAAGTTTTCTGGT
AGCTGCAGATGCTGTGCAAAACAGATTAAATTCTATCGCATGAGACATCATTACAAATCT
TGTAAGAAGTATCAGGATGAATATGGTGTTTCTTCTATCATTCCAAACTTTCAGATCTCT
CAAGATTCAGTAGGGAACAGCAATAGGAGTGAAACATCCACATCTGATAACACAGAAACT
TACCAAGAGAATACAAGTTCTTCTGGTCATCCTACTTTTAAGTGTCCCCTGTGTCAAGAA
TCAAATTTTACCAGACAGCGTTTACTGGATCACTGTAACAGTAATCACCTATTTCAGATA
GTTCCTGTGACATGTCCTATTTGTGTGTCTCTTCCTTGGGGAGATCCTAGCCAGATTACC
AGAAATTTCGTTAGTCATCTAAATCAGAGACATCAATTTGATTATGGAGAATTTGTGAAT
CTTCAGCTAGATGAAGAAACCCAATACCAAACTGCTGTTGAAGAATCTTTTCAAGTAAAC
ATCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT